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PDB: 34568 件

4RFE
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Crystal structure of ADCC-potent ANTI-HIV-1 Rhesus macaque antibody JR4 Fab
分子名称: CHLORIDE ION, Fab heavy chain of ADCC-potent anti-HIV-1 antibody JR4, Fab light chain of ADCC-potent anti-HIV-1 antibody JR4, ...
著者Wu, X, Gohain, N, Tolbert, W.D, Pazgier, M.
登録日2014-09-25
公開日2015-07-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Cocrystal Structures of Antibody N60-i3 and Antibody JR4 in Complex with gp120 Define More Cluster A Epitopes Involved in Effective Antibody-Dependent Effector Function against HIV-1.
J.Virol., 89, 2015
6FUU
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Transcriptional regulator LmrR with bound heme
分子名称: PROTOPORPHYRIN IX CONTAINING FE, Transcriptional regulator PadR family
著者Reddem, E.R, Thunnissen, A.M.W.H.
登録日2018-02-27
公開日2018-05-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献An Artificial Heme Enzyme for Cyclopropanation Reactions.
Angew. Chem. Int. Ed. Engl., 57, 2018
8DM5
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BU of 8dm5 by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron BA.2 spike protein in complex with human ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
著者Zhu, X, Saville, J.W, Mannar, D, Berezuk, A.M, Cholak, S, Tuttle, K.S, Vahdatihassani, F, Subramaniam, S.
登録日2022-07-08
公開日2023-02-08
実験手法ELECTRON MICROSCOPY (2.51 Å)
主引用文献Structural analysis of receptor engagement and antigenic drift within the BA.2 spike protein.
Cell Rep, 42, 2023
1U1C
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BU of 1u1c by Molmil
Structure of E. coli uridine phosphorylase complexed to 5-benzylacyclouridine (BAU)
分子名称: 1-((2-HYDROXYETHOXY)METHYL)-5-BENZYLPYRIMIDINE-2,4(1H,3H)-DIONE, PHOSPHATE ION, POTASSIUM ION, ...
著者Bu, W, Settembre, E.C, Ealick, S.E.
登録日2004-07-15
公開日2005-07-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for inhibition of Escherichia coli uridine phosphorylase by 5-substituted acyclouridines.
Acta Crystallogr.,Sect.D, 61, 2005
7DWO
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BU of 7dwo by Molmil
Crystal structure of Vibrio fischeri DarR in complex with DNA reveals the transcriptional activation mechanism of LTTR family members
分子名称: Predicted DNA-binding transcriptional regulator
著者Wang, W.W, Wu, H, He, J.H, Yu, F.
登録日2021-01-17
公開日2021-07-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.611 Å)
主引用文献Crystal structure details of Vibrio fischeri DarR and mutant DarR-M202I from LTTR family reveals their activation mechanism.
Int.J.Biol.Macromol., 183, 2021
4N37
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BU of 4n37 by Molmil
Structure of langerin CRD I313 D288 complexed with Me-Man
分子名称: C-type lectin domain family 4 member K, CALCIUM ION, methyl alpha-D-mannopyranoside
著者Feinberg, H, Rowntree, T.J.W, Tan, S.L.W, Drickamer, K, Weis, W.I, Taylor, M.E.
登録日2013-10-06
公開日2013-11-20
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Common polymorphisms in human langerin change specificity for glycan ligands.
J.Biol.Chem., 288, 2013
8DWL
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BU of 8dwl by Molmil
Inhibitor-3:PP1 coexpressed complex
分子名称: 1,2-ETHANEDIOL, E3 ubiquitin-protein ligase PPP1R11, Serine/threonine-protein phosphatase PP1-alpha catalytic subunit, ...
著者Choy, M.S, Srivastava, G, Page, R, Peti, W.
登録日2022-08-01
公開日2023-02-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Inhibitor-3 inhibits Protein Phosphatase 1 via a metal binding dynamic protein-protein interaction.
Nat Commun, 14, 2023
4MY9
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BU of 4my9 by Molmil
Crystal Structure of the Inosine 5'-monophosphate Dehydrogenase with an Internal Deletion of the CBS Domain from Bacillus anthracis str. Ames complexed with inhibitor C91
分子名称: INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase, MALONATE ION, ...
著者Kim, Y, Makowska-Grzyska, M, Gu, M, Gorla, S.K, Hedstrom, L, Anderson, W.F, Joachimiak, A, CSGID, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2013-09-27
公開日2014-06-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.5893 Å)
主引用文献Crystal Structure of the Inosine 5'-monophosphate Dehydrogenase with an Internal Deletion of the CBS Domain from Bacillus anthracis str. Ames complexed with inhibitor C91
To be Published
7DWN
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BU of 7dwn by Molmil
Crystal structure of Vibrio fischeri DarR in complex with DNA reveals the transcriptional activation mechanism of LTTR family members
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Predicted DNA-binding transcriptional regulator
著者Wang, W.W, Wu, H, He, J.H, Yu, F.
登録日2021-01-17
公開日2021-07-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Crystal structure details of Vibrio fischeri DarR and mutant DarR-M202I from LTTR family reveals their activation mechanism.
Int.J.Biol.Macromol., 183, 2021
6FPG
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BU of 6fpg by Molmil
Structure of the Ustilago maydis chorismate mutase 1 in complex with a Zea mays kiwellin
分子名称: CITRIC ACID, Chromosome 16, whole genome shotgun sequence, ...
著者Altegoer, F, Steinchen, W, Bange, G.
登録日2018-02-09
公開日2019-01-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A kiwellin disarms the metabolic activity of a secreted fungal virulence factor.
Nature, 565, 2019
5WUJ
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BU of 5wuj by Molmil
Crystal structure of FliF-FliG complex from H. pylori
分子名称: Flagellar M-ring protein, Flagellar motor switch protein FliG, GLYCEROL
著者Au, S.W, Xue, C, Lam, K.H, Lee, S.H.
登録日2016-12-19
公開日2017-12-20
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the FliF-FliG complex from Helicobacter pylori yields insight into the assembly of the motor MS-C ring in the bacterial flagellum
J. Biol. Chem., 293, 2018
8DWK
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BU of 8dwk by Molmil
Inhibitor-3:PP1 reconstituted complex
分子名称: E3 ubiquitin-protein ligase PPP1R11, MANGANESE (II) ION, Serine/threonine-protein phosphatase PP1-alpha catalytic subunit
著者Choy, M.S, Srivastava, G, Page, R, Peti, W.
登録日2022-08-01
公開日2023-02-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Inhibitor-3 inhibits Protein Phosphatase 1 via a metal binding dynamic protein-protein interaction.
Nat Commun, 14, 2023
6ZHB
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BU of 6zhb by Molmil
3D electron diffraction structure of bovine insulin
分子名称: Insulin, ZINC ION
著者Blum, T, Housset, D, Clabbers, M.T.B, van Genderen, E, Bacia-Verloop, M, Zander, U, McCarthy, A.A, Schoehn, G, Ling, W.L, Abrahams, J.P.
登録日2020-06-22
公開日2021-01-27
最終更新日2024-01-24
実験手法ELECTRON CRYSTALLOGRAPHY (3.25 Å)
主引用文献Statistically correcting dynamical electron scattering improves the refinement of protein nanocrystals, including charge refinement of coordinated metals.
Acta Crystallogr D Struct Biol, 77, 2021
1RKX
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BU of 1rkx by Molmil
Crystal Structure at 1.8 Angstrom of CDP-D-glucose 4,6-dehydratase from Yersinia pseudotuberculosis
分子名称: CDP-glucose-4,6-dehydratase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Vogan, E.M, Bellamacina, C, He, X, Liu, H.W, Ringe, D, Petsko, G.A.
登録日2003-11-23
公開日2004-03-30
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure at 1.8 A Resolution of CDP-d-Glucose 4,6-Dehydratase from Yersinia pseudotuberculosis
Biochemistry, 43, 2004
8JGA
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BU of 8jga by Molmil
Cryo-EM structure of Mi3 fused with FKBP
分子名称: Peptidyl-prolyl cis-trans isomerase FKBP1A,2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
著者Zhang, H.W, Kang, W, Xue, C.
登録日2023-05-20
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (3.68 Å)
主引用文献Dynamic Metabolons Using Stimuli-Responsive Protein Cages.
J.Am.Chem.Soc., 146, 2024
6ZI8
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BU of 6zi8 by Molmil
X-ray diffraction structure of bovine insulin at 2.3 A resolution
分子名称: CHLORIDE ION, Insulin, ZINC ION
著者Housset, D, Ling, W.L, Bacia-Verloop, M, Zander, U, McCarthy, A.A, Schoehn, G.
登録日2020-06-25
公開日2021-01-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Statistically correcting dynamical electron scattering improves the refinement of protein nanocrystals, including charge refinement of coordinated metals.
Acta Crystallogr D Struct Biol, 77, 2021
5W79
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BU of 5w79 by Molmil
Crystal Structure of the Group II Chaperonin from Methanococcus Maripaludis, Cysteine-less mutant in the Apo State
分子名称: Chaperonin, SULFATE ION
著者Dalton, K.M, Lopez, T, Liu, C, Ralston, C.Y, Pereira, J.H, Chartron, J.W, McAndrew, R.P, Douglas, N.R, Adams, P.D, Pande, V.S, Frydman, J.
登録日2017-06-19
公開日2018-06-20
最終更新日2018-08-29
実験手法X-RAY DIFFRACTION (3.122 Å)
主引用文献The Conformational Cycle of the Group II Chaperonin Termini
To Be Published
8DNL
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BU of 8dnl by Molmil
Acidipropionibacterium acidipropionici encapsulin in an open state at pH 7.5
分子名称: 29 kDa antigen cfp29
著者Jones, J.A, Andreas, M.P, Giessen, T.W.
登録日2022-07-11
公開日2023-03-22
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.32 Å)
主引用文献Exploring the Extreme Acid Tolerance of a Dynamic Protein Nanocage.
Biomacromolecules, 24, 2023
4RC8
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BU of 4rc8 by Molmil
Crystal structure of cyanobacterial aldehyde-deformylating oxygenase bound with fatty acid
分子名称: Aldehyde decarbonylase, FE (III) ION, STEARIC ACID
著者Jia, C.J, Li, M, Chang, W.R.
登録日2014-09-14
公開日2014-12-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Structural insights into the catalytic mechanism of aldehyde-deformylating oxygenases.
Protein Cell, 6, 2015
8DNA
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BU of 8dna by Molmil
Acidipropionibacterium acidipropionici encapsulin in a closed state at pH 3.0
分子名称: 29 kDa antigen cfp29
著者Jones, J.A, Andreas, M.P, Giessen, T.W.
登録日2022-07-11
公開日2023-03-22
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献Exploring the Extreme Acid Tolerance of a Dynamic Protein Nanocage.
Biomacromolecules, 24, 2023
5WGM
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BU of 5wgm by Molmil
Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with ACY-1083
分子名称: 1,2-ETHANEDIOL, 2-[(4,4-difluoro-1-phenylcyclohexyl)amino]-N-hydroxypyrimidine-5-carboxamide, DI(HYDROXYETHYL)ETHER, ...
著者Porter, N.J, Christianson, D.W.
登録日2017-07-14
公開日2017-12-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Unusual zinc-binding mode of HDAC6-selective hydroxamate inhibitors.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4RZC
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BU of 4rzc by Molmil
Fv M6P-1 in complex with mannose-6-phosphate
分子名称: 6-O-phosphono-alpha-D-mannopyranose, Fv M6P-1 heavy chain, Fv M6P-1 light chain, ...
著者Blackler, R.J, Evans, D.W, Evans, S.V, Muller-Loennies, S.
登録日2014-12-19
公開日2015-11-04
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.723 Å)
主引用文献Single-chain antibody-fragment M6P-1 possesses a mannose 6-phosphate monosaccharide-specific binding pocket that distinguishes N-glycan phosphorylation in a branch-specific manner.
Glycobiology, 26, 2016
8DN9
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BU of 8dn9 by Molmil
Acidipropionibacterium acidipropionici encapsulin in a closed state at pH 7.5
分子名称: 29 kDa antigen cfp29
著者Jones, J.A, Andreas, M.P, Giessen, T.W.
登録日2022-07-11
公開日2023-03-22
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Exploring the Extreme Acid Tolerance of a Dynamic Protein Nanocage.
Biomacromolecules, 24, 2023
6ZCK
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BU of 6zck by Molmil
Coxsackievirus B4 in complex with capsid binder compound 48
分子名称: 4-[(6-propoxynaphthalen-2-yl)sulfonylamino]benzoic acid, Capsid protein VP1, Capsid protein VP2, ...
著者Flatt, J.W, Domanska, A, Butcher, S.J.
登録日2020-06-11
公開日2021-03-17
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Identification of a conserved virion-stabilizing network inside the interprotomer pocket of enteroviruses.
Commun Biol, 4, 2021
6ZCL
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BU of 6zcl by Molmil
Coxsackievirus B3 in complex with capsid binder compound 17
分子名称: 4-[[4-[1,3-bis(oxidanylidene)isoindol-2-yl]phenyl]sulfonylamino]benzoic acid, MYRISTIC ACID, capsid protein VP1, ...
著者Domanska, A, Flatt, J.W, Butcher, S.J.
登録日2020-06-11
公開日2021-03-17
最終更新日2023-05-31
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Identification of a conserved virion-stabilizing network inside the interprotomer pocket of enteroviruses.
Commun Biol, 4, 2021

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件を2024-08-21に公開中

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