Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 34568 件

8UGJ
DownloadVisualize
BU of 8ugj by Molmil
In-situ structure of typeB supercomplex in respiratory chain (composite)
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
著者Zheng, W, Zhang, K, Zhu, J.
登録日2023-10-05
公開日2024-06-19
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 631, 2024
3I6A
DownloadVisualize
BU of 3i6a by Molmil
Human GST A1-1 GIMF mutant with Glutathione
分子名称: GLUTATHIONE, Glutathione S-transferase A1
著者Balogh, L.M, Le Trong, I, Stenkamp, R.E, Atkins, W.M.
登録日2009-07-06
公開日2009-09-01
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structural analysis of a glutathione transferase A1-1 mutant tailored for high catalytic efficiency with toxic alkenals.
Biochemistry, 48, 2009
1MHY
DownloadVisualize
BU of 1mhy by Molmil
METHANE MONOOXYGENASE HYDROXYLASE
分子名称: FE (III) ION, METHANE MONOOXYGENASE HYDROXYLASE
著者Elango, N, Radhakrishnan, R, Froland, W.A, Waller, B.J, Earhart, C.A, Lipscomb, J.D, Ohlendorf, D.H.
登録日1996-10-21
公開日1997-05-15
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the hydroxylase component of methane monooxygenase from Methylosinus trichosporium OB3b
Protein Sci., 6, 1997
4LTZ
DownloadVisualize
BU of 4ltz by Molmil
F95M Epi-isozizaene synthase: Complex with Mg, inorganic pyrophosphate and benzyl triethyl ammonium cation
分子名称: Epi-isozizaene synthase, GLYCEROL, MAGNESIUM ION, ...
著者Li, R, Chou, W, Himmelberger, J.A, Litwin, K, Harris, G, Cane, D.E, Christianson, D.W.
登録日2013-07-24
公開日2013-12-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.448 Å)
主引用文献Reprogramming the Chemodiversity of Terpenoid Cyclization by Remolding the Active Site Contour of epi-Isozizaene Synthase.
Biochemistry, 53, 2014
3DWN
DownloadVisualize
BU of 3dwn by Molmil
Crystal structure of the long-chain fatty acid transporter FadL mutant A77E/S100R
分子名称: LAURYL DIMETHYLAMINE-N-OXIDE, Long-chain fatty acid transport protein
著者Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B.
登録日2008-07-22
公開日2008-12-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Transmembrane passage of hydrophobic compounds through a protein channel wall.
Nature, 458, 2009
8UER
DownloadVisualize
BU of 8uer by Molmil
In-situ complex I with Q10 (State-gamma)
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CARDIOLIPIN, ...
著者Zheng, W, Zhu, J, Zhang, K.
登録日2023-10-02
公開日2024-06-19
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 631, 2024
4LUU
DownloadVisualize
BU of 4luu by Molmil
V329A Epi-isozizaene synthase: Complex with Mg, inorganic pyrophosphate and benzyl triethyl ammonium cation
分子名称: Epi-isozizaene synthase, GLYCEROL, MAGNESIUM ION, ...
著者Li, R, Chou, W, Himmelberger, J.A, Litwin, K, Harris, G, Cane, D.E, Christianson, D.W.
登録日2013-07-25
公開日2013-12-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Reprogramming the Chemodiversity of Terpenoid Cyclization by Remolding the Active Site Contour of epi-Isozizaene Synthase.
Biochemistry, 53, 2014
8UGK
DownloadVisualize
BU of 8ugk by Molmil
High resolution in-situ structure of complex III in respiratory supercomplex (composite)
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CARDIOLIPIN, ...
著者Zheng, W, Zhu, J, Zhang, K.
登録日2023-10-05
公開日2024-06-19
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.1 Å)
主引用文献High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 631, 2024
2X2I
DownloadVisualize
BU of 2x2i by Molmil
Crystal structure of the Gracilariopsis lemaneiformis alpha-1,4- glucan lyase with acarbose
分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, ALPHA-1,4-GLUCAN LYASE ISOZYME 1, GLYCEROL
著者Rozeboom, H.J, Yu, S, Madrid, S, Kalk, K.H, Dijkstra, B.W.
登録日2010-01-13
公開日2011-01-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structure of Alpha-1,4-Glucan Lyase, a Unique Glycoside Hydrolase Family Member with a Novel Catalytic Mechanism.
J.Biol.Chem., 288, 2013
7E30
DownloadVisualize
BU of 7e30 by Molmil
Crystal structure of a novel alpha/beta hydrolase in apo form in complex with citrate
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CITRIC ACID, SULFATE ION, ...
著者Gao, J, Han, X, Zheng, Y.Y, Liu, W.D.
登録日2021-02-07
公開日2022-02-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Multiple Substrate Binding Mode-Guided Engineering of a Thermophilic PET Hydrolase.
Acs Catalysis, 12, 2022
5EIG
DownloadVisualize
BU of 5eig by Molmil
Engineered human cystathionine gamma lyase (E59T, E339V) to deplet cysteine
分子名称: CYSTEINE, Cystathionine gamma-lyase, SULFATE ION
著者Yan, W, Zhang, J.
登録日2015-10-29
公開日2016-11-09
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Systemic Depletion of Serum L-Cyst(e)ine with an Engineered Human Enzyme Mediates Potent Induction of ROS and Cancer Ablation
To Be Published
1AFA
DownloadVisualize
BU of 1afa by Molmil
STRUCTURAL BASIS OF GALACTOSE RECOGNITION IN C-TYPE ANIMAL LECTINS
分子名称: CALCIUM ION, CHLORIDE ION, MANNOSE-BINDING PROTEIN-A, ...
著者Kolatkar, A.R, Weis, W.I.
登録日1995-11-03
公開日1996-04-03
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of galactose recognition by C-type animal lectins.
J.Biol.Chem., 271, 1996
4LXW
DownloadVisualize
BU of 4lxw by Molmil
L72V Epi-isozizaene synthase: Complex with Mg, inorganic pyrophosphate and benzyl triethyl ammonium cation
分子名称: Epi-isozizaene synthase, GLYCEROL, MAGNESIUM ION, ...
著者Li, R, Chou, W, Himmelberger, J.A, Litwin, K, Harris, G, Cane, D.E, Christianson, D.W.
登録日2013-07-30
公開日2013-12-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.092 Å)
主引用文献Reprogramming the Chemodiversity of Terpenoid Cyclization by Remolding the Active Site Contour of epi-Isozizaene Synthase.
Biochemistry, 53, 2014
7LXT
DownloadVisualize
BU of 7lxt by Molmil
Structure of Plasmodium falciparum 20S proteasome with bound bortezomib
分子名称: 20S proteasome alpha-1 subunit, 20S proteasome alpha-2 subunit, 20S proteasome alpha-3 subunit, ...
著者Morton, C.J, Metcalfe, R.D, Liu, B, Xie, S.C, Hanssen, E, Leis, A.P, Tilley, L, Griffin, M.D.W.
登録日2021-03-05
公開日2021-09-22
最終更新日2022-04-13
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Design of proteasome inhibitors with oral efficacy in vivo against Plasmodium falciparum and selectivity over the human proteasome.
Proc.Natl.Acad.Sci.USA, 118, 2021
3DXX
DownloadVisualize
BU of 3dxx by Molmil
Crystal structure of EcTrmB
分子名称: GLYCEROL, tRNA (guanine-N(7)-)-methyltransferase
著者Zhou, H.H, Liu, Q, Gao, Y.X, Teng, M.K, Niu, L.W.
登録日2008-07-25
公開日2009-05-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Monomeric tRNA (m(7)G46) methyltransferase from Escherichia coli presents a novel structure at the function-essential insertion
Proteins, 76, 2009
5ZM8
DownloadVisualize
BU of 5zm8 by Molmil
Crystal structure of ORP2-ORD in complex with PI(4,5)P2
分子名称: Oxysterol-binding protein-related protein 2, [(2~{S})-1-octadecanoyloxy-3-[oxidanyl-[(1~{R},2~{R},3~{S},4~{S},5~{S},6~{S})-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propan-2-yl] icosa-5,8,11,14-tetraenoate
著者Wang, H, Dong, J.Q, Wang, J, Wu, J.W.
登録日2018-04-01
公開日2019-01-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献ORP2 Delivers Cholesterol to the Plasma Membrane in Exchange for Phosphatidylinositol 4, 5-Bisphosphate (PI(4,5)P2).
Mol. Cell, 73, 2019
7E31
DownloadVisualize
BU of 7e31 by Molmil
Crystal structure of a novel alpha/beta hydrolase mutant in apo form
分子名称: TRIETHYLENE GLYCOL, alpha/beta hydrolase
著者Gao, J, Han, X, Zheng, Y.Y, Liu, W.D.
登録日2021-02-07
公開日2022-02-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Multiple Substrate Binding Mode-Guided Engineering of a Thermophilic PET Hydrolase.
Acs Catalysis, 12, 2022
7LXU
DownloadVisualize
BU of 7lxu by Molmil
Structure of Plasmodium falciparum 20S proteasome with bound MPI-5
分子名称: 20S proteasome alpha-1 subunit, 20S proteasome alpha-2 subunit, 20S proteasome alpha-3 subunit, ...
著者Metcalfe, R.D, Morton, C.J, Xie, S.C, Liu, B, Hanssen, E, Leis, A.P, Tilley, L, Griffin, M.D.W.
登録日2021-03-05
公開日2021-09-22
最終更新日2022-04-13
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Design of proteasome inhibitors with oral efficacy in vivo against Plasmodium falciparum and selectivity over the human proteasome.
Proc.Natl.Acad.Sci.USA, 118, 2021
8UEU
DownloadVisualize
BU of 8ueu by Molmil
In-situ complex I, Deactive class03
分子名称: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ...
著者Zheng, W, Zhu, J, Zhang, K.
登録日2023-10-02
公開日2024-06-19
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 631, 2024
2X6G
DownloadVisualize
BU of 2x6g by Molmil
X-ray Structure of Macrophage Inflammatory Protein-1 alpha (D27A)
分子名称: C-C MOTIF CHEMOKINE 3
著者Guo, Q, Ren, M, Tang, W.
登録日2010-02-17
公開日2010-11-03
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Polymerization of Mip-1 Chemokine (Ccl3 and Ccl4) and Clearance of Mip-1 by Insulin-Degrading Enzyme.
Embo J., 29, 2010
8UGE
DownloadVisualize
BU of 8uge by Molmil
In-situ complex III, state II
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CARDIOLIPIN, ...
著者Zheng, W, Zhang, K, Zhu, J.
登録日2023-10-05
公開日2024-06-19
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 631, 2024
4DQQ
DownloadVisualize
BU of 4dqq by Molmil
Ternary complex of Bacillus DNA Polymerase I Large Fragment E658A, DNA duplex, and rCTP (paired with dG of template) in presence of Mg2+
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CYTIDINE-5'-TRIPHOSPHATE, ...
著者Wang, W, Beese, L.S.
登録日2012-02-16
公開日2012-06-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.595 Å)
主引用文献Structural factors that determine selectivity of a high fidelity DNA polymerase for deoxy-, dideoxy-, and ribonucleotides.
J.Biol.Chem., 287, 2012
2X7A
DownloadVisualize
BU of 2x7a by Molmil
Structural basis of HIV-1 tethering to membranes by the Bst2-tetherin ectodomain
分子名称: BONE MARROW STROMAL ANTIGEN 2, CHLORIDE ION, GLYCEROL, ...
著者Natrajan, G, McCarthy, A.A, Weissenhorn, W.
登録日2010-02-25
公開日2010-04-28
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Structural Basis of HIV-1 Tethering to Membranes by the Bst-2/Tetherin Ectodomain.
Cell Host Microbe, 7, 2010
8UAS
DownloadVisualize
BU of 8uas by Molmil
Rhodococcus ruber Alcohol Dehydrogenase NADH Biomimetic Complex - Compound 1a
分子名称: 1-[3-[~{tert}-butyl(dimethyl)silyl]oxypropyl]pyridine-3-carboxamide, CITRIC ACID, ISOPROPYL ALCOHOL, ...
著者Wilson, L.A, Guddat, L.W, Schenk, G, Scott, C.
登録日2023-09-22
公開日2024-07-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Characterization of Enzymatic Interactions with Functional Nicotinamide Cofactor Biomimetics
Catalysts, 14, 2024
7LXV
DownloadVisualize
BU of 7lxv by Molmil
Structure of human 20S proteasome with bound MPI-5
分子名称: N-[(1R)-2-([1,1'-biphenyl]-4-yl)-1-boronoethyl]-1-methyl-L-prolinamide, Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, ...
著者Metcalfe, R.D, Morton, C.J, Liu, B, Xie, S.C, Hanssen, E, Leis, A.P, Tilley, L, Griffin, M.D.W.
登録日2021-03-05
公開日2021-09-22
最終更新日2022-04-13
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Design of proteasome inhibitors with oral efficacy in vivo against Plasmodium falciparum and selectivity over the human proteasome.
Proc.Natl.Acad.Sci.USA, 118, 2021

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon