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PDB: 34447 results

8W7O
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BU of 8w7o by Molmil
Fe-O nanocluster of form-V in the 4-fold channel of Ureaplasma diversum ferritin
Descriptor: FE (III) ION, Ferritin, MAGNESIUM ION
Authors:Wang, W.M, Xi, H.F, Gong, W.J, Ma, D.Y, Wang, H.F.
Deposit date:2023-08-31
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.399 Å)
Cite:Growth Process of Fe-O Nanoclusters with Different Sizes Biosynthesized by Protein Nanocages.
J.Am.Chem.Soc., 146, 2024
8WAS
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BU of 8was by Molmil
Structure of transcribing complex 9 (TC9), the initially transcribing complex with Pol II positioned 9nt downstream of TSS.
Descriptor: Alpha-amanitin, CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, ...
Authors:Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y.
Deposit date:2023-09-08
Release date:2023-12-06
Last modified:2024-01-03
Method:ELECTRON MICROSCOPY (6.13 Å)
Cite:Structural visualization of transcription initiation in action.
Science, 382, 2023
8V4X
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BU of 8v4x by Molmil
Structure of MALT1 in complex with an allosteric inhibitor
Descriptor: Inhibitor peptide, Mucosa-associated lymphoid tissue lymphoma translocation protein 1, N-{7-[(1S)-1-methoxyethyl]-2-methyl[1,3]thiazolo[5,4-b]pyridin-6-yl}-N'-[6-(2H-1,2,3-triazol-2-yl)-5-(trifluoromethyl)pyridin-3-yl]urea
Authors:Judge, R.A, Pappano, W.N.
Deposit date:2023-11-29
Release date:2024-05-01
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.486 Å)
Cite:Inhibition of MALT1 and BCL2 Induces Synergistic Antitumor Activity in Models of B-Cell Lymphoma.
Mol.Cancer Ther., 23, 2024
8WAP
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BU of 8wap by Molmil
Structure of transcribing complex 6 (TC6), the initially transcribing complex with Pol II positioned 6nt downstream of TSS.
Descriptor: Alpha-amanitin, CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, ...
Authors:Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y.
Deposit date:2023-09-08
Release date:2023-12-06
Last modified:2024-01-03
Method:ELECTRON MICROSCOPY (5.85 Å)
Cite:Structural visualization of transcription initiation in action.
Science, 382, 2023
8WAV
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BU of 8wav by Molmil
De novo transcribing complex 12 (TC12), the early elongation complex with Pol II positioned 12nt downstream of TSS
Descriptor: Alpha-amanitin, DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ...
Authors:Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y.
Deposit date:2023-09-08
Release date:2023-12-06
Last modified:2024-01-03
Method:ELECTRON MICROSCOPY (2.72 Å)
Cite:Structural visualization of transcription initiation in action.
Science, 382, 2023
8TWZ
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BU of 8twz by Molmil
ELIC with Propylamine in spNW15 nanodiscs with 2:1:1 POPC:POPE:POPG
Descriptor: 3-AMINOPROPANE, Erwinia chrysanthemi ligand-gated ion channel
Authors:Dalal, V, Arcario, M.J, Petroff II, J.T, Deitzen, N.M, Tan, B.K, Brannigan, G, Cheng, W.W.L.
Deposit date:2023-08-21
Release date:2024-03-27
Method:ELECTRON MICROSCOPY (3.17 Å)
Cite:Lipid nanodisc scaffold and size alter the structure of a pentameric ligand-gated ion channel.
Nat Commun, 15, 2024
8WAN
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BU of 8wan by Molmil
Structure of transcribing complex 4 (TC4), the initially transcribing complex with Pol II positioned 4nt downstream of TSS.
Descriptor: Alpha-amanitin, CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, ...
Authors:Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y.
Deposit date:2023-09-07
Release date:2023-12-06
Last modified:2024-01-03
Method:ELECTRON MICROSCOPY (6.07 Å)
Cite:Structural visualization of transcription initiation in action.
Science, 382, 2023
8W6Q
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BU of 8w6q by Molmil
ferritin from Ureaplasma diversum soaking in Fe2+ solution for 0 min
Descriptor: CHLORIDE ION, FE (III) ION, Ferritin, ...
Authors:Wang, W.M, Xi, H.F, Gong, W.J, Ma, D.Y, Wang, H.F.
Deposit date:2023-08-29
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Growth Process of Fe-O Nanoclusters with Different Sizes Biosynthesized by Protein Nanocages.
J.Am.Chem.Soc., 146, 2024
8WAL
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BU of 8wal by Molmil
Structure of transcribing complex 3 (TC3), the initially transcribing complex with Pol II positioned 3nt downstream of TSS.
Descriptor: Alpha-amanitin, CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, ...
Authors:Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y.
Deposit date:2023-09-07
Release date:2023-12-06
Last modified:2024-01-03
Method:ELECTRON MICROSCOPY (8.52 Å)
Cite:Structural visualization of transcription initiation in action.
Science, 382, 2023
8W6M
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BU of 8w6m by Molmil
Native strucutre of ferritin from Ureaplasma diversum
Descriptor: CHLORIDE ION, FE (III) ION, Ferritin, ...
Authors:Wang, W.M, Xi, H.F, Gong, W.J, Ma, D.Y, Wang, H.F.
Deposit date:2023-08-29
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Growth Process of Fe-O Nanoclusters with Different Sizes Biosynthesized by Protein Nanocages.
J.Am.Chem.Soc., 146, 2024
8W6S
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BU of 8w6s by Molmil
Ferritin from Ureaplasma diversum soaking in Fe2+ solution for 2 min
Descriptor: CHLORIDE ION, FE (III) ION, Ferritin, ...
Authors:Wang, W.M, Xi, H.F, Gong, W.J, Ma, D.Y, Wang, H.F.
Deposit date:2023-08-29
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:Growth Process of Fe-O Nanoclusters with Different Sizes Biosynthesized by Protein Nanocages.
J.Am.Chem.Soc., 146, 2024
8W6U
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BU of 8w6u by Molmil
Ferritin from Ureaplasma diversum soaking in Fe2+ solution for 5 min
Descriptor: CHLORIDE ION, FE (III) ION, Ferritin, ...
Authors:Wang, W.M, Xi, H.F, Gong, W.J, Ma, D.Y, Wang, H.F.
Deposit date:2023-08-29
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:Growth Process of Fe-O Nanoclusters with Different Sizes Biosynthesized by Protein Nanocages.
J.Am.Chem.Soc., 146, 2024
8W73
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BU of 8w73 by Molmil
Fe-O nanocluster of form-I in the 4-fold channel of Ureaplasma diversum ferritin
Descriptor: CHLORIDE ION, FE (III) ION, Ferritin, ...
Authors:Wang, W.M, Xi, H.F, Gong, W.J, Ma, D.Y, Wang, H.F.
Deposit date:2023-08-30
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Growth Process of Fe-O Nanoclusters with Different Sizes Biosynthesized by Protein Nanocages.
J.Am.Chem.Soc., 146, 2024
8WAZ
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BU of 8waz by Molmil
De novo transcribing complex 16 (TC16), the early elongation complex with Pol II positioned 16nt downstream of TSS
Descriptor: Alpha-amanitin, DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ...
Authors:Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y.
Deposit date:2023-09-08
Release date:2023-12-06
Last modified:2024-01-03
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Structural visualization of transcription initiation in action.
Science, 382, 2023
8W79
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BU of 8w79 by Molmil
Fe-O nanocluster of form-III in the 4-fold channel of Ureaplasma diversum ferritin
Descriptor: FE (III) ION, Ferritin
Authors:Wang, W.M, Xi, H.F, Gong, W.J, Ma, D.Y, Wang, H.F.
Deposit date:2023-08-30
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.697 Å)
Cite:Growth Process of Fe-O Nanoclusters with Different Sizes Biosynthesized by Protein Nanocages.
J.Am.Chem.Soc., 146, 2024
8W7B
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BU of 8w7b by Molmil
Fe-O nanocluster of form-IV in the 4-fold channel of Ureaplasma diversum ferritin
Descriptor: FE (III) ION, Ferritin
Authors:Wang, W.M, Xi, H.F, Gong, W.J, Ma, D.Y, Wang, H.F.
Deposit date:2023-08-30
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Growth Process of Fe-O Nanoclusters with Different Sizes Biosynthesized by Protein Nanocages.
J.Am.Chem.Soc., 146, 2024
8WAO
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BU of 8wao by Molmil
Structure of transcribing complex 5 (TC5), the initially transcribing complex with Pol II positioned 5nt downstream of TSS.
Descriptor: Alpha-amanitin, CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, ...
Authors:Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y.
Deposit date:2023-09-07
Release date:2023-12-06
Last modified:2024-01-03
Method:ELECTRON MICROSCOPY (6.4 Å)
Cite:Structural visualization of transcription initiation in action.
Science, 382, 2023
8W7T
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BU of 8w7t by Molmil
Fe-O nanocluster of form-VII in the 4-fold channel of Ureaplasma diversum ferritin
Descriptor: CHLORIDE ION, FE (III) ION, Ferritin, ...
Authors:Wang, W.M, Xi, H.F, Gong, W.J, Ma, D.Y, Wang, H.F.
Deposit date:2023-08-31
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.499 Å)
Cite:Growth Process of Fe-O Nanoclusters with Different Sizes Biosynthesized by Protein Nanocages.
J.Am.Chem.Soc., 146, 2024
8W7U
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BU of 8w7u by Molmil
Mutant of ferritin from Ureaplasma diversum (Udif-E164A-E168A) without soaking
Descriptor: FE (III) ION, Ferritin, MAGNESIUM ION
Authors:Wang, W.M, Xi, H.F, Gong, W.J, Ma, D.Y, Wang, H.F.
Deposit date:2023-08-31
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:Growth Process of Fe-O Nanoclusters with Different Sizes Biosynthesized by Protein Nanocages.
J.Am.Chem.Soc., 146, 2024
8W6Y
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BU of 8w6y by Molmil
Ferritin from Ureaplasma diversum soaking in Fe2+ solution for 10 min
Descriptor: FE (III) ION, Ferritin
Authors:Wang, W.M, Xi, H.F, Gong, W.J, Ma, D.Y, Wang, H.F.
Deposit date:2023-08-30
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:Growth Process of Fe-O Nanoclusters with Different Sizes Biosynthesized by Protein Nanocages.
J.Am.Chem.Soc., 146, 2024
8W7Q
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BU of 8w7q by Molmil
Fe-O nanocluster of form-VI in the 4-fold channel of Ureaplasma diversum ferritin
Descriptor: CHLORIDE ION, FE (III) ION, Ferritin, ...
Authors:Wang, W.M, Xi, H.F, Gong, W.J, Ma, D.Y, Wang, H.F.
Deposit date:2023-08-31
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Growth Process of Fe-O Nanoclusters with Different Sizes Biosynthesized by Protein Nanocages.
J.Am.Chem.Soc., 146, 2024
8WAX
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BU of 8wax by Molmil
De novo transcribing complex 14 (TC14), the early elongation complex with Pol II positioned 14nt downstream of TSS
Descriptor: Alpha-amanitin, DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ...
Authors:Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y.
Deposit date:2023-09-08
Release date:2023-12-06
Last modified:2024-01-03
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:Structural visualization of transcription initiation in action.
Science, 382, 2023
8W7V
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BU of 8w7v by Molmil
Udif-E164A-E168A soaking in Fe2+ solution for 50 minutes
Descriptor: FE (III) ION, Ferritin
Authors:Wang, W.M, Xi, H.F, Gong, W.J, Ma, D.Y, Wang, H.F.
Deposit date:2023-08-31
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.805 Å)
Cite:Growth Process of Fe-O Nanoclusters with Different Sizes Biosynthesized by Protein Nanocages.
J.Am.Chem.Soc., 146, 2024
9AVG
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BU of 9avg by Molmil
Structure of human calcium-sensing receptor in complex with chimeric Gs (miniGis) protein in nanodiscs
Descriptor: (19R,22S,25R)-22,25,26-trihydroxy-16,22-dioxo-17,21,23-trioxa-22lambda~5~-phosphahexacosan-19-yl (9Z)-octadec-9-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zuo, H, Park, J, Frangaj, A, Ye, J, Lu, G, Manning, J.J, Asher, W.B, Lu, Z, Hu, G, Wang, L, Mendez, J, Eng, E, Zhang, Z, Lin, X, Grasucci, R, Hendrickson, W.A, Clarke, O.B, Javitch, J.A, Conigrave, A.D, Fan, Q.R.
Deposit date:2024-03-02
Release date:2024-04-17
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Promiscuous G-protein activation by the calcium-sensing receptor.
Nature, 629, 2024
8WAQ
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BU of 8waq by Molmil
Structure of transcribing complex 7 (TC7), the initially transcribing complex with Pol II positioned 7nt downstream of TSS.
Descriptor: Alpha-amanitin, CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, ...
Authors:Chen, X, Liu, W, Wang, Q, Wang, X, Ren, Y, Qu, X, Li, W, Xu, Y.
Deposit date:2023-09-08
Release date:2023-12-06
Last modified:2024-01-03
Method:ELECTRON MICROSCOPY (6.29 Å)
Cite:Structural visualization of transcription initiation in action.
Science, 382, 2023

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PDB entries from 2024-07-17

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