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PDB: 22 results
6WEY
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BU of 6wey by Molmil
High-resolution structure of the SARS-CoV-2 NSP3 Macro X domain
Descriptor: Non-structural protein 3
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2020-04-03
Release date:2020-04-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Molecular Basis for ADP-Ribose Binding to the Mac1 Domain of SARS-CoV-2 nsp3.
Biochemistry, 59, 2020
5BKA
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BU of 5bka by Molmil
2.1 Angstrom structure of ActVI-ORFA from Streptomyces Coelicolor
Descriptor: Hydroxylacyl-CoA dehydrogenase
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2019-06-02
Release date:2020-06-03
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Structural characterization of three noncanonical NTF2-like superfamily proteins: implications for polyketide biosynthesis.
Acta Crystallogr.,Sect.F, 76, 2020
6VW4
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BU of 6vw4 by Molmil
2.35 Angstrom structure of Caci_6494 from Catenulispora Acidiphila in complex with S-DNPA
Descriptor: Aromatic-ring-hydroxylating dioxygenase beta subunit, [(3S)-9-hydroxy-1-methyl-10-oxo-4,10-dihydro-3H-benzo[g]isochromen-3-yl]acetic acid
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2020-02-18
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural characterization of three noncanonical NTF2-like superfamily proteins: implications for polyketide biosynthesis.
Acta Crystallogr.,Sect.F, 76, 2020
8E37
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BU of 8e37 by Molmil
Structure of Campylobacter concisus wild-type SeMet PglC
Descriptor: N,N'-diacetylbacilliosaminyl-1-phosphate transferase
Authors:Vuksanovic, N, Ray, L.C, Imperiali, B, Allen, K.N.
Deposit date:2022-08-16
Release date:2023-09-06
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Synergistic computational and experimental studies of a phosphoglycosyl transferase membrane/ligand ensemble.
J.Biol.Chem., 299, 2023
8DVW
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BU of 8dvw by Molmil
Structure of the Campylobacter concisus glycosyltransferase PglA R203Q
Descriptor: N, N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase, URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE
Authors:Vuksanovic, N, Clasman, J.R, Bernstein, H.M, Imperiali, B, Allen, K.N.
Deposit date:2022-07-30
Release date:2024-01-17
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Specificity determinants revealed by the structure of glycosyltransferase Campylobacter concisus PglA.
Protein Sci., 33, 2024
8DVZ
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BU of 8dvz by Molmil
Structure of the Campylobacter concisus glycosyltransferase PglA R282V variant
Descriptor: N, N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase, URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE
Authors:Vuksanovic, N, Clasman, J.R, Bernstein, H.M, Imperiali, B, Allen, K.N.
Deposit date:2022-07-30
Release date:2024-01-17
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Specificity determinants revealed by the structure of glycosyltransferase Campylobacter concisus PglA.
Protein Sci., 33, 2024
8DQD
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BU of 8dqd by Molmil
Structure of the Campylobacter concisus glycosyltransferase PglA
Descriptor: N, N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase, URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE
Authors:Vuksanovic, N, Clasman, J.R, Bernstein, H.M, Imperiali, B, Allen, K.N.
Deposit date:2022-07-18
Release date:2024-01-17
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Specificity determinants revealed by the structure of glycosyltransferase Campylobacter concisus PglA.
Protein Sci., 33, 2024
6XCT
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BU of 6xct by Molmil
Porcine pepsin in complex with amprenavir
Descriptor: Pepsin A, {3-[(4-AMINO-BENZENESULFONYL)-ISOBUTYL-AMINO]-1-BENZYL-2-HYDROXY-PROPYL}-CARBAMIC ACID TETRAHYDRO-FURAN-3-YL ESTER
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2020-06-09
Release date:2021-06-16
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Porcine pepsin in complex with amprenavir
To Be Published
6XCZ
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BU of 6xcz by Molmil
Porcine pepsin in complex with saquinavir
Descriptor: (2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide, Pepsin A
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2020-06-09
Release date:2021-06-16
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Porcine pepsin in complex with saquinavir
To Be Published
6XCY
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BU of 6xcy by Molmil
Porcine pepsin in complex with ritonavir
Descriptor: Pepsin A, RITONAVIR
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2020-06-09
Release date:2021-06-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Porcine pepsin in complex with ritonavir
To Be Published
6XD2
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BU of 6xd2 by Molmil
Porcine pepsin in complex with darunavir
Descriptor: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, Pepsin A
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2020-06-09
Release date:2021-06-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Porcine pepsin in complex with darunavir
To Be Published
6P35
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BU of 6p35 by Molmil
2.5 Angstrom structure of wild type Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with 2-keto arginine and NADP
Descriptor: 5-[(diaminomethylidene)amino]-2-oxopentanoic acid, GLYCEROL, Glyoxylate/hydroxypyruvate reductase A, ...
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2019-05-22
Release date:2020-05-27
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.495 Å)
Cite:2.1 Angstrom structure of wild type Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with glyoxylate and NADP
To Be Published
6P77
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BU of 6p77 by Molmil
2.5 Angstrom structure of Caci_6494 from Catenulispora Acidiphila
Descriptor: Aromatic-ring-hydroxylating dioxygenase beta subunit, GLYCEROL, TETRAETHYLENE GLYCOL, ...
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2019-06-05
Release date:2020-06-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Structural characterization of three noncanonical NTF2-like superfamily proteins: implications for polyketide biosynthesis.
Acta Crystallogr.,Sect.F, 76, 2020
6P7L
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BU of 6p7l by Molmil
1.8 Angstrom structure of Aln2 from Streptomyces sp. CM020
Descriptor: Aln2, GLYCEROL
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2019-06-06
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural characterization of three noncanonical NTF2-like superfamily proteins: implications for polyketide biosynthesis.
Acta Crystallogr.,Sect.F, 76, 2020
6OVL
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BU of 6ovl by Molmil
2.1 Angstrom structure of wild type Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with glyoxylate and NADP
Descriptor: GLYCEROL, GLYOXYLIC ACID, Glyoxylate/hydroxypyruvate reductase A, ...
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2019-05-08
Release date:2020-05-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:2.1 Angstrom structure of wild type Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with glyoxylate and NADP
To Be Published
7JQI
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BU of 7jqi by Molmil
Structure of wild type Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with alpha-ketoglutarate and NADP+
Descriptor: 2-OXOGLUTARIC ACID, Glyoxylate/hydroxypyruvate reductase A, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2020-08-11
Release date:2021-09-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of wild type Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with alpha-ketoglutarate and NADP+
To Be Published
7JQH
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BU of 7jqh by Molmil
Structure of wild type Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with phosphate and NADP+
Descriptor: GLYCEROL, Glyoxylate/hydroxypyruvate reductase A, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2020-08-11
Release date:2021-09-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of wild type Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with phosphate and NADP+
To Be Published
7JQJ
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BU of 7jqj by Molmil
Structure of W45F Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with NADP+
Descriptor: Glyoxylate/hydroxypyruvate reductase A, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2020-08-11
Release date:2021-09-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of W45F Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with NADP+
To Be Published
6OXN
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BU of 6oxn by Molmil
2.6 Angstrom structure of W45F/H46S Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with glyoxylate and NADP
Descriptor: GLYCEROL, GLYOXYLIC ACID, Glyoxylate/hydroxypyruvate reductase A, ...
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2019-05-13
Release date:2020-05-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:2.1 Angstrom structure of wild type Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with glyoxylate and NADP
To Be Published
7JME
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BU of 7jme by Molmil
Structure of the SARS-CoV-2 NSP3 Macro X domain in complex with cyclic AMP
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Non-structural protein 3
Authors:Vuksanovic, N, Melkonian, T.R, Silvaggi, N.R.
Deposit date:2020-07-31
Release date:2020-09-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Discovery of Drug-Like Ligands for the Mac1 Domain of SARS-CoV-2 Nsp3.
Slas Discov, 25, 2020
8TN3
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BU of 8tn3 by Molmil
Structure of S. hygroscopicus aminotransferase MppQ complexed with pyridoxamine 5'-phosphate (PMP)
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, PLP-dependent aminotransferase MppQ
Authors:Silvaggi, N.R, Vuksanovic, N.
Deposit date:2023-08-01
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structural and Biochemical Characterization of MppQ, an L-Enduracididine Biosynthetic Enzyme from Streptomyces hygroscopicus.
Biochemistry, 62, 2023
8TN2
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BU of 8tn2 by Molmil
Structure of S. hygroscopicus aminotransferase MppQ complexed with pyridoxal-5'-phosphate (PLP)
Descriptor: PLP-dependent aminotransferase MppQ
Authors:Silvaggi, N.R, Vuksanovic, N.
Deposit date:2023-08-01
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and Biochemical Characterization of MppQ, an L-Enduracididine Biosynthetic Enzyme from Streptomyces hygroscopicus.
Biochemistry, 62, 2023

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