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PDB: 86 results

5CHB
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BU of 5chb by Molmil
Crystal structure of nvPizza2-S16H58 coordinating a CdCl2 nanocrystal
Descriptor: CADMIUM ION, CHLORIDE ION, SULFATE ION, ...
Authors:Voet, A.R.D, Noguchi, H, Addy, C, Zhang, K.Y.J, Tame, J.R.H.
Deposit date:2015-07-10
Release date:2015-07-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Biomineralization of a Cadmium Chloride Nanocrystal by a Designed Symmetrical Protein
Angew.Chem.Int.Ed.Engl., 54, 2015
5F53
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BU of 5f53 by Molmil
Nano-ring of cadmium ions coordinated by nvPizza2-S16S58
Descriptor: CADMIUM ION, CHLORIDE ION, NVPIZZA2-S16S58
Authors:Voet, A.R.D, Tame, J.R.H.
Deposit date:2015-12-04
Release date:2016-12-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A cadmium chloride ring created by a designed symmetrical protein
To Be Published
4ZCN
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BU of 4zcn by Molmil
Crystal structure of nvPizza2-S16S58
Descriptor: IODIDE ION, SULFATE ION, nvPizza2-S16S58
Authors:Voet, A.R.D, Noguchi, H, Addy, C, Zhang, K.Y.J, Tame, J.R.H.
Deposit date:2015-04-16
Release date:2015-07-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of nvPizza2-S16S58
To Be Published
3WW9
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BU of 3ww9 by Molmil
Crystal structure of the computationally designed Pizza6 protein
Descriptor: GLYCEROL, SULFATE ION, pizza6 protein
Authors:Voet, A.R.D, Noguchi, H, Addy, C, Simoncini, D, Terada, D, Unzai, S, Park, S.Y, Zhang, K.Y.J, Tame, J.R.H.
Deposit date:2014-06-17
Release date:2014-10-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Computational design of a self-assembling symmetrical beta-propeller protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
3WW8
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BU of 3ww8 by Molmil
Crystal structure of the computationally designed Pizza3 protein
Descriptor: GLYCEROL, Pizza3 protein, SULFATE ION
Authors:Voet, A.R.D, Noguchi, H, Addy, C, Simoncini, D, Terada, D, Unzai, S, Park, S.Y, Zhang, K.Y.J, Tame, J.R.H.
Deposit date:2014-06-17
Release date:2014-10-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.402 Å)
Cite:Computational design of a self-assembling symmetrical beta-propeller protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
3WWF
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BU of 3wwf by Molmil
Crystal structure of the computationally designed Pizza2-SR protein
Descriptor: pizza2sr-pb protein
Authors:Voet, A.R.D, Noguchi, H, Addy, C, Simoncini, D, Terada, D, Unzai, S, Park, S.Y, Zhang, K.Y.J, Tame, J.R.H.
Deposit date:2014-06-17
Release date:2014-10-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Computational design of a self-assembling symmetrical beta-propeller protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
3WWB
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BU of 3wwb by Molmil
Crystal structure of the computationally designed Pizza2-SR protein
Descriptor: Pizza2-SR protein
Authors:Voet, A.R.D, Noguchi, H, Addy, C, Simoncini, D, Terada, D, Unzai, S, Park, S.Y, Zhang, K.Y.J, Tame, J.R.H.
Deposit date:2014-06-17
Release date:2014-10-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Computational design of a self-assembling symmetrical beta-propeller protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
3WWA
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BU of 3wwa by Molmil
Crystal structure of the computationally designed Pizza7 protein after heat treatment
Descriptor: ISOPROPYL ALCOHOL, Pizza7H protein
Authors:Voet, A.R.D, Noguchi, H, Addy, C, Simoncini, D, Terada, D, Unzai, S, Park, S.Y, Zhang, K.Y.J, Tame, J.R.H.
Deposit date:2014-06-17
Release date:2014-10-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.988 Å)
Cite:Computational design of a self-assembling symmetrical beta-propeller protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
3WW7
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BU of 3ww7 by Molmil
Crystal structure of the computationally designed Pizza2 protein
Descriptor: GLYCEROL, Pizza2 protein
Authors:Voet, A.R.D, Noguchi, H, Addy, C, Simoncini, D, Terada, D, Unzai, S, Park, S.Y, Zhang, K.Y.J, Tame, J.R.H.
Deposit date:2014-06-17
Release date:2014-10-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.697 Å)
Cite:Computational design of a self-assembling symmetrical beta-propeller protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
6G6O
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BU of 6g6o by Molmil
Crystal structure of the computationally designed Ika8 protein: crystal packing No.1 in P63
Descriptor: GLYCEROL, Ika8
Authors:Noguchi, H, Addy, C, Simoncini, D, Van Meervelt, L, Schiex, T, Zhang, K.Y.J, Tame, J.R.H, Voet, A.R.D.
Deposit date:2018-04-01
Release date:2018-11-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Computational design of symmetrical eight-bladed beta-propeller proteins.
IUCrJ, 6, 2019
3LPU
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BU of 3lpu by Molmil
HIV integrase
Descriptor: (2S)-2-(6-chloro-2-methyl-4-phenylquinolin-3-yl)pentanoic acid, 2-[3-[3-(2-hydroxyethoxy)propoxy]propoxy]ethanol, CALCIUM ION, ...
Authors:Nicolet, S, Christ, F, Voet, A, Marchand, A, Strelkov, S.V, de Maeyer, M, Chaltin, P, Debyzer, Z.
Deposit date:2010-02-06
Release date:2010-05-12
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Rational design of small-molecule inhibitors of the LEDGF/p75-integrase interaction and HIV replication.
Nat.Chem.Biol., 6, 2010
3LPT
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BU of 3lpt by Molmil
HIV integrase
Descriptor: (6-chloro-2-oxo-4-phenyl-1,2-dihydroquinolin-3-yl)acetic acid, 2-[3-[3-(2-hydroxyethoxy)propoxy]propoxy]ethanol, CALCIUM ION, ...
Authors:Nicolet, S, Christ, F, Voet, A, Marchand, A, Strelkov, S.V, de Maeyer, M, Chaltin, P, Debyzer, Z.
Deposit date:2010-02-05
Release date:2010-05-12
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Rational design of small-molecule inhibitors of the LEDGF/p75-integrase interaction and HIV replication.
Nat.Chem.Biol., 6, 2010
6TJG
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BU of 6tjg by Molmil
Crystal structure of the computationally designed Cake8 protein
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Cake8
Authors:Laier, I, Mylemans, B, Noguchi, H, Voet, A.R.D.
Deposit date:2019-11-26
Release date:2020-05-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural plasticity of a designer protein sheds light on beta-propeller protein evolution.
Febs J., 288, 2021
6TJC
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BU of 6tjc by Molmil
Crystal structure of the computationally designed Cake3 protein
Descriptor: Cake3, GLYCEROL, PHOSPHATE ION
Authors:Laier, I, Mylemans, B, Voet, A.R.D, Noguchi, H.
Deposit date:2019-11-26
Release date:2020-05-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural plasticity of a designer protein sheds light on beta-propeller protein evolution.
Febs J., 288, 2021
5NSD
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BU of 5nsd by Molmil
Co-crystal structure of NAMPT dimer with KPT-9274
Descriptor: (~{E})-3-(6-azanylpyridin-3-yl)-~{N}-[[5-[4-[4,4-bis(fluoranyl)piperidin-1-yl]carbonylphenyl]-7-(4-fluorophenyl)-1-benzofuran-2-yl]methyl]prop-2-enamide, GLYCEROL, Nicotinamide phosphoribosyltransferase, ...
Authors:Neggers, J.E, Kwanten, B, Dierckx, T, Noguchi, H, Voet, A, Vercruysse, T, Baloglu, E, Senapedis, W, Jacquemyn, M, Daelemans, D.
Deposit date:2017-04-26
Release date:2018-02-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.046 Å)
Cite:Target identification of small molecules using large-scale CRISPR-Cas mutagenesis scanning of essential genes.
Nat Commun, 9, 2018
8RM6
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BU of 8rm6 by Molmil
Crystal Structure of Human Androgen Receptor DNA Binding Domain Bound to its Response Element: C3(1)ARE
Descriptor: C3(1)ARE_Chain C, C3(1)ARE_Chain D, Isoform 2 of Androgen receptor, ...
Authors:Lee, X.Y, Helsen, C, Van Eynde, W, Voet, A, Claessens, F.
Deposit date:2024-01-05
Release date:2024-04-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural mechanism underlying variations in DNA binding by the androgen receptor.
J.Steroid Biochem.Mol.Biol., 241, 2024
8RM7
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BU of 8rm7 by Molmil
Crystal Structure of Human Androgen Receptor DNA Binding Domain Bound to its Response Element: MMTV-177 GRE/ARE
Descriptor: Isoform 2 of Androgen receptor, MMTV-177 GRE/ARE Chain C, MMTV-177 GRE/ARE, ...
Authors:Lee, X.Y, Helsen, C, Van Eynde, W, Voet, A, Claessens, F.
Deposit date:2024-01-05
Release date:2024-04-24
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural mechanism underlying variations in DNA binding by the androgen receptor.
J.Steroid Biochem.Mol.Biol., 241, 2024
5XG5
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BU of 5xg5 by Molmil
Crystal structure of Mitsuba-1 with bound NAcGal
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, MITSUBA-1
Authors:Terada, D, Voet, A.R.D, Kamata, K, Zhang, K.Y.J, Tame, J.R.H.
Deposit date:2017-04-12
Release date:2017-07-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Computational design of a symmetrical beta-trefoil lectin with cancer cell binding activity.
Sci Rep, 7, 2017
5I1Z
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BU of 5i1z by Molmil
Structure of nvPizza2-H16S58
Descriptor: SULFATE ION, nvPizza2-H16S58
Authors:Tame, J.R.H, Voet, A.R.D.
Deposit date:2016-02-07
Release date:2017-02-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Broken Symmetry: Partial domain swapping in an artificial trimeric protein
To Be Published
6Y7O
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BU of 6y7o by Molmil
The complex between the eight-bladed symmetrical designer protein Tako8 and the silicotungstic acid Keggin (STA)
Descriptor: Keggin (STA), Tako8
Authors:Vandebroek, L, Noguchi, H, Parac-Vogt, T.N, Van Meervelt, L, Voet, A.R.D.
Deposit date:2020-03-02
Release date:2020-12-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Shape and Size Complementarity-Induced Formation of Supramolecular Protein Assemblies with Metal-Oxo Clusters
Cryst.Growth Des., 2021
6Y7P
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BU of 6y7p by Molmil
The complex between the eight-bladed symmetrical designer protein Tako8 and 1:2 zirconium(IV) Wells-Dawson (ZrWD)
Descriptor: Tako8, W-Zr-cluster
Authors:Vandebroek, L, Noguchi, H, Parac-Vogt, T.N, Van Meervelt, L, Voet, A.R.D.
Deposit date:2020-03-02
Release date:2020-12-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Shape and Size Complementarity-Induced Formation of Supramolecular Protein Assemblies with Metal-Oxo Clusters
Cryst.Growth Des., 2021
7ZCJ
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BU of 7zcj by Molmil
Crystal structure of Pizza6-TNH-TSH with Silicotungstic Acid (STA) polyoxometalate
Descriptor: Keggin (STA), Pizza6-TNH-TSH
Authors:Wouters, S.M.L, Kamata, K, Takahashi, K, Vandebroek, L, Parac-Vogt, T.N, Tame, J.R.H, Voet, A.R.D.
Deposit date:2022-03-28
Release date:2023-04-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Mutational study of a symmetry matched protein-polyoxometalate interface
To be published
7ZPZ
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BU of 7zpz by Molmil
Crystal structure of Pizza6-TSR-TSH with Silicotungstic Acid (STA) polyoxometalate
Descriptor: Keggin (STA), Pizza6-TSR-TSH
Authors:Wouters, S.M.L, Kamata, K, Takahashi, K, Vandebroek, L, Parac-Vogt, T.N, Tame, J.R.H, Voet, A.R.D.
Deposit date:2022-04-29
Release date:2023-05-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Mutational study of a symmetry matched protein-polyoxometalate interface
To be published
7ZQ2
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BU of 7zq2 by Molmil
Crystal structure of Pizza6-RSH-TSH with Silicotungstic Acid (STA) polyoxometalate
Descriptor: Keggin (STA), Pizza6-RSH-TSH
Authors:Wouters, S.M.L, Kamata, K, Takahashi, K, Vandebroek, L, Parac-Vogt, T.N, Tame, J.R.H, Voet, A.R.D.
Deposit date:2022-04-29
Release date:2023-05-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Mutational study of a symmetry matched protein-polyoxometalate interface
To be published
7ZQG
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BU of 7zqg by Molmil
Crystal structure of Pizza6-KSH-TSH with Silicotungstic Acid (STA) polyoxometalate
Descriptor: Keggin (STA), Pizza6-KSH-TSH
Authors:Wouters, S.M.L, Kamata, K, Takahashi, K, Vandebroek, L, Parac-Vogt, T.N, Tame, J.R.H, Voet, A.R.D.
Deposit date:2022-04-29
Release date:2023-05-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mutational study of a symmetry matched protein-polyoxometalate interface
To be published

 

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