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PDB: 98 件

1MQT
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Swine Vesicular Disease Virus coat protein
分子名称: OCTANOIC ACID (2-HYDROXY-1-HYDROXYMETHYL-HEPTADEC-3-ENYL)-AMIDE, Polyprotein, Polyprotein Capsid Protein
著者Verdaguer, N, Jimenez-Clavero, M.A, Fita, I, Ley, V.
登録日2002-09-17
公開日2004-03-02
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献STRUCTURE OF SWINE VESICULAR DISEASE VIRUS: MAPPING OF CHANGES OCCURRING DURING ADAPTATION OF HUMAN COXSACKIE B5 VIRUS TO INFECT SWINE
J.Virol., 77, 2003
5JXS
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BU of 5jxs by Molmil
Mutant GC216/7AA of 3D polymerase from Foot-and-Mouth Disease Virus
分子名称: MAGNESIUM ION, RNA Primer, RNA Template, ...
著者Verdaguer, N, Ferrer-Orta, C.
登録日2016-05-13
公開日2016-06-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Both cis and trans Activities of Foot-and-Mouth Disease Virus 3D Polymerase Are Essential for Viral RNA Replication.
J.Virol., 90, 2016
6GVV
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BU of 6gvv by Molmil
Mutant M16A of RNA dependent RNA polymerase 3D from Foot-and-Mouth disease Virus
分子名称: GLYCEROL, RNA polymerase 3D
著者Verdaguer, N, Ferrer Orta, C.
登録日2018-06-21
公開日2018-08-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Contribution of a Multifunctional Polymerase Region of Foot-and-Mouth Disease Virus to Lethal Mutagenesis.
J.Virol., 92, 2018
6GVY
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Mutant M16A of RNA dependent RNA polymerase 3D from Foot-and-Mouth disease Virus complexed with an template -primer RNA
分子名称: GLYCEROL, Genome polyprotein, RNA (5'-R(P*CP*CP*GP*GP*G)-3'), ...
著者Verdaguer, N, Ferrer-Orta, C.
登録日2018-06-21
公開日2018-08-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Contribution of a Multifunctional Polymerase Region of Foot-and-Mouth Disease Virus to Lethal Mutagenesis.
J. Virol., 92, 2018
1V9U
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Human Rhinovirus 2 bound to a fragment of its cellular receptor protein
分子名称: CALCIUM ION, Coat protein VP1, Coat protein VP2, ...
著者Verdaguer, N, Fita, I, Reithmayer, M, Moser, R, Blaas, D.
登録日2004-02-03
公開日2004-05-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献X-ray structure of a minor group human rhinovirus bound to a fragment of its cellular receptor protein
NAT.STRUCT.MOL.BIOL., 11, 2004
1FPN
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BU of 1fpn by Molmil
HUMAN RHINOVIRUS SEROTYPE 2 (HRV2)
分子名称: COAT PROTEIN VP1, COAT PROTEIN VP2, COAT PROTEIN VP3, ...
著者Verdaguer, N, Blaas, D, Fita, I.
登録日2000-08-31
公開日2000-09-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of human rhinovirus serotype 2 (HRV2).
J.Mol.Biol., 300, 2000
6S2L
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BU of 6s2l by Molmil
FMDV 3D polymerase crystallized in presence of (F)uridylylated VPg peptide
分子名称: GLYCEROL, Genome polyprotein
著者Verdaguer, N, Ferrer-Orta, C.
登録日2019-06-21
公開日2019-07-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献(F)uridylylated Peptides Linked to VPg1 of Foot-and- Mouth Disease Virus (FMDV): Design, Synthesis and X-Ray Crystallography of the Complexes with FMDV RNA-Dependent RNA Polymerase.
Molecules, 24, 2019
1DSY
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BU of 1dsy by Molmil
C2 DOMAIN FROM PROTEIN KINASE C (ALPHA) COMPLEXED WITH CA2+ AND PHOSPHATIDYLSERINE
分子名称: 1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE, CALCIUM ION, PHOSPHATE ION, ...
著者Verdaguer, N, Corbalan-Garcia, S, Ochoa, W.F, Fita, I, Gomez-Fernandez, J.C.
登録日2000-01-10
公開日2000-01-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Ca(2+) bridges the C2 membrane-binding domain of protein kinase Calpha directly to phosphatidylserine.
EMBO J., 18, 1999
4LT7
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BU of 4lt7 by Molmil
Crystal structure of the c2a domain of rabphilin-3a in complex with a calcium
分子名称: CALCIUM ION, Rabphilin-3A
著者Verdaguer, N, Ferrer-Orta, C, Buxaderas, M, Corbalan-Garcia, S, Perez-Sanchez, D, Guerrero-Valero, M, Luengo, G, Pous, J, Guerra, P, Gomez-Fernandez, J.C, Guillen, J.
登録日2013-07-23
公開日2013-12-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural insights into the Ca2+ and PI(4,5)P2 binding modes of the C2 domains of rabphilin 3A and synaptotagmin 1.
Proc.Natl.Acad.Sci.USA, 110, 2013
5LOW
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BU of 5low by Molmil
Structure of the Ca2+-bound Rabphilin 3A C2B domain SNAP25 complex (P21 space group)
分子名称: CALCIUM ION, GLYCEROL, Rabphilin-3A, ...
著者Verdaguer, N, Ferrer-Orta, C.
登録日2016-08-10
公開日2017-06-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural characterization of the Rabphilin-3A-SNAP25 interaction.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4WZQ
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Mutant K20E of RNA dependent RNA polymerase 3D from Foot-and-Mouth disease Virus complexed with RNA
分子名称: MANGANESE (II) ION, RNA dependent-RNA polymerase 3D, RNA template, ...
著者Verdaguer, N, Ferrer-Orta, C.
登録日2014-11-20
公開日2015-05-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Multifunctionality of a picornavirus polymerase domain: nuclear localization signal and nucleotide recognition.
J.Virol., 89, 2015
4Y3C
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BU of 4y3c by Molmil
I304V 3D polymerase mutant of EMCV
分子名称: 3D polymerase, CHLORIDE ION, GLYCEROL
著者Verdaguer, N, Ferrer-Orta, C, Vives-Adrian, L.
登録日2015-02-10
公開日2015-04-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The RNA Template Channel of the RNA-Dependent RNA Polymerase as a Target for Development of Antiviral Therapy of Multiple Genera within a Virus Family.
Plos Pathog., 11, 2015
4Y2C
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M300V 3D polymerase mutant of EMCV
分子名称: GLYCEROL, Genome polyprotein
著者Verdaguer, N, Ferrer-Orta, C, Vives-Adrian, L.
登録日2015-02-09
公開日2015-04-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The RNA Template Channel of the RNA-Dependent RNA Polymerase as a Target for Development of Antiviral Therapy of Multiple Genera within a Virus Family.
Plos Pathog., 11, 2015
4WZM
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BU of 4wzm by Molmil
Mutant K18E of RNA dependent RNA polymerase from Foot-and-Mouth Disease Virus complexed with RNA
分子名称: ACETATE ION, GLYCEROL, MANGANESE (II) ION, ...
著者Verdaguer, N, Ferrer-Orta, C, de la Higuera, N.
登録日2014-11-20
公開日2015-05-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Multifunctionality of a picornavirus polymerase domain: nuclear localization signal and nucleotide recognition.
J.Virol., 89, 2015
4X2B
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BU of 4x2b by Molmil
K20A RNA dependent RNA polymerase mutant from Foot-and-Mouth disease Virus complexed with an RNA
分子名称: MAGNESIUM ION, RNA dependent RNA polymerase, RNA primer, ...
著者Verdaguer, N, Ferrer-Orta, C.
登録日2014-11-26
公開日2015-05-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Multifunctionality of a picornavirus polymerase domain: nuclear localization signal and nucleotide recognition.
J.Virol., 89, 2015
2D47
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BU of 2d47 by Molmil
MOLECULAR STRUCTURE OF A COMPLETE TURN OF A-DNA
分子名称: DNA (5'-D(*CP*CP*CP*CP*CP*GP*CP*GP*GP*GP*GP*G)-3'), SPERMINE
著者Verdaguer, N, Aymami, J, Fernandez-Forner, D, Fita, I, Coll, M, Huynh-Dinh, T, Igolen, J, Subirana, J.A.
登録日1991-10-02
公開日1991-10-02
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular structure of a complete turn of A-DNA.
J.Mol.Biol., 221, 1991
2R72
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BU of 2r72 by Molmil
Crystal structure of infectious bursal disease virus VP1 polymerase, incubated with Mg2+ ion.
分子名称: INFECTIOUS BURSAL DISEASE VIRUS VP1 POLYMERASE, MAGNESIUM ION
著者Garriga, D, Navarro, A, Querol-Audi, J, Abaitua, F, Rodriguez, J.F, Verdaguer, N.
登録日2007-09-07
公開日2007-11-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Activation mechanism of a noncanonical RNA-dependent RNA polymerase.
Proc.Natl.Acad.Sci.Usa, 104, 2007
4PDW
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BU of 4pdw by Molmil
A benzonitrile analogue inhibits rhinovirus replication
分子名称: 4-[(4,5-dimethoxy-2-nitrophenyl)acetyl]benzonitrile, Capsid protein VP4/VP2, GLYCEROL, ...
著者Querol-Audi, J, Guerra, P, Lacroix, C, Roche, M, Franco, D, Froeyen, M, Terme, T, Vanelle, P, Neyts, J, Leyssen, P, Verdaguer, N.
登録日2014-04-22
公開日2014-07-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献A novel benzonitrile analogue inhibits rhinovirus replication.
J.Antimicrob.Chemother., 69, 2014
3ZUE
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BU of 3zue by Molmil
Rabbit Hemorrhagic Disease Virus (RHDV)capsid protein
分子名称: CAPSID STRUCTURAL PROTEIN VP60
著者Luque, D, Gonzalez, J.M, Gomez-Blanco, J, Marabini, R, Chichon, J, Mena, I, Angulo, I, Carrascosa, J.L, Verdaguer, N, Trus, B.L, Barcena, J, Caston, J.R.
登録日2011-07-18
公開日2012-05-23
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (10.3 Å)
主引用文献Epitope Insertion at the N-Terminal Molecular Switch of the Rabbit Hemorrhagic Disease Virus T=3 Capsid Protein Leads to Larger T=4 Capsids.
J.Virol., 86, 2012
6YDR
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BU of 6ydr by Molmil
Crystal structure of Mengla Virus VP30 C-terminal domain
分子名称: GLYCEROL, Minor nucleoprotein VP30, SULFATE ION
著者Tomas Gilabert, O, Ferrero, D.S, Verdaguer, N.
登録日2020-03-20
公開日2020-04-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Crystal structure of Mengla Virus VP30 C-terminal domain
To Be Published
1WNE
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Foot and Mouth Disease Virus RNA-dependent RNA polymerase in complex with a template-primer RNA
分子名称: 5'-R(*CP*AP*UP*GP*GP*GP*CP*C)-3', 5'-R(*GP*GP*CP*CP*C)-3', MAGNESIUM ION, ...
著者Ferrer-Orta, C, Arias, A, Perez-Luque, R, Escarmis, C, Domingo, E, Verdaguer, N.
登録日2004-07-31
公開日2004-08-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of Foot-and-Mouth Disease Virus RNA-dependent RNA Polymerase and Its Complex with a Template-Primer RNA
J.Biol.Chem., 279, 2004
7PKR
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Vault structure in primmed conformation
分子名称: Major vault protein
著者Guerra, P, Gonzalez-Alamos, M, Llauro, A, Casanas, A, Querol-Audi, J, de Pablo, P, Verdaguer, N.
登録日2021-08-26
公開日2022-03-16
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Symmetry disruption commits vault particles to disassembly.
Sci Adv, 8, 2022
7PKY
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Half-vault structure
分子名称: Major vault protein
著者Guerra, P, Gonzalez-Alamos, M, Llauro, A, Casanas, A, Querol-Audi, J, de Pablo, P, Verdaguer, N.
登録日2021-08-27
公開日2022-03-23
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (7.9 Å)
主引用文献Symmetry disruption commits vault particles to disassembly.
Sci Adv, 8, 2022
3TN9
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BU of 3tn9 by Molmil
X-ray structure of the HRV2 empty capsid (B-particle)
分子名称: Protein VP1, Protein VP2, Protein VP3
著者Garriga, D, Pickl-Herk, A, Luque, D, Wruss, J, Caston, J.R, Blaas, D, Verdaguer, N.
登録日2011-09-01
公開日2012-03-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Insights into minor group rhinovirus uncoating: the X-ray structure of the HRV2 empty capsid.
Plos Pathog., 8, 2012
2GSY
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BU of 2gsy by Molmil
The 2.6A structure of Infectious Bursal Virus Derived T=1 Particles
分子名称: CALCIUM ION, polyprotein
著者Garriga, D, Querol-Audi, J, Abaitua, F, Saugar, I, Pous, J, Verdaguer, N, Caston, J.R, Rodriguez, J.F.
登録日2006-04-27
公開日2006-07-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The 2.6-angstrom structure of infectious bursal disease virus-derived t=1 particles reveals new stabilizing elements of the virus capsid.
J.Virol., 80, 2006

 

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