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PDB: 109 件
1ANR
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BU of 1anr by Molmil
CIS-ACTING RNA REGULATORY ELEMENT (HIV-1 TAR), NMR, 20 STRUCTURES
分子名称: RNA REGULATORY ELEMENT TAR
著者Aboul-Ela, F, Varani, G, Karn, J.
登録日1996-07-06
公開日1997-01-11
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of HIV-1 TAR RNA in the absence of ligands reveals a novel conformation of the trinucleotide bulge.
Nucleic Acids Res., 24, 1996
1T4O
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BU of 1t4o by Molmil
Crystal structure of rnt1p dsRBD
分子名称: Ribonuclease III
著者Leulliot, N, Quevillon-Cheruel, S, Graille, M, van Tilbeurgh, H, Leeper, T.C, Godin, K.S, Edwards, T.E, Sigurdsson, S.T, Rozenkrants, N, Nagel, R.J, Ares Jr, M, Varani, G.
登録日2004-04-30
公開日2004-06-22
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A new alpha-helical extension promotes RNA binding by the dsRBD of Rnt1p RNAse III
Embo J., 23, 2004
1T4N
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BU of 1t4n by Molmil
Solution structure of Rnt1p dsRBD
分子名称: Ribonuclease III
著者Leulliot, N, Quevillon-Cheruel, S, Graille, M, van Tilbeurgh, H, Leeper, T.C, Godin, K.S, Edwards, T.E, Sigurdsson, S.T, Rozenkrants, N, Nagel, R.J, Ares, M, Varani, G.
登録日2004-04-30
公開日2004-07-13
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献A new alpha-helical extension promotes RNA binding by the dsRBD of Rnt1p RNAse III
Embo J., 23, 2004
6BE7
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BU of 6be7 by Molmil
Solution structure of de novo macrocycle Design8.1
分子名称: DDPT(DPR)(DAR)Q(DGN)
著者Shortridge, M.D, Hosseinzadeh, P, Pardo-Avila, F, Varani, G, Baker, D.
登録日2017-10-24
公開日2018-01-03
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Comprehensive computational design of ordered peptide macrocycles.
Science, 358, 2017
6BEQ
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BU of 6beq by Molmil
Solution structure of de novo macrocycle design10.1
分子名称: AAR(DVA)(DPR)R(DLE)(DTH)PE
著者Shortridge, M.D, Hosseinzadeh, P, Pardo-Avila, F, Varani, G, Baker, D.
登録日2017-10-25
公開日2018-01-10
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Comprehensive computational design of ordered peptide macrocycles.
Science, 358, 2017
6BF5
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BU of 6bf5 by Molmil
Solution structure of de novo macrocycle design7.3a
分子名称: QDP(DPR)K(DTH)(DAS)
著者Shortridge, M.D, Hosseinzadeh, P, Pardo-Avila, F, Varani, G, Baker, D.
登録日2017-10-25
公開日2018-01-10
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Comprehensive computational design of ordered peptide macrocycles.
Science, 358, 2017
6BEN
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BU of 6ben by Molmil
Solution structure of de novo macrocycle design8.2
分子名称: (DAR)Q(DPR)(DGN)R(DGL)PQ
著者Shortridge, M.D, Hosseinzadeh, P, Pardo-Avila, F, Varani, G, Baker, B.
登録日2017-10-25
公開日2017-12-27
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Comprehensive computational design of ordered peptide macrocycles.
Science, 358, 2017
6BF3
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BU of 6bf3 by Molmil
Solution structure of de novo macrocycle design7.3a
分子名称: QDP(DPR)K(2TL)(DAS)
著者Shortridge, M.D, Hosseinzadeh, P, Pardo-Avila, F, Varani, G, Baker, D.
登録日2017-10-25
公開日2018-01-10
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Comprehensive computational design of ordered peptide macrocycles.
Science, 358, 2017
6BEU
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BU of 6beu by Molmil
Solution structure of de novo macrocycle design14_ss
分子名称: (DCY)N(DVA)(DPR)DVYC(DPR)(DSG)KY(DVA)(DPR)
著者Shortridge, M.D, Hosseinzadeh, P, Pardo-Avila, F, Varani, G, Baker, D.
登録日2017-10-25
公開日2017-12-27
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Comprehensive computational design of ordered peptide macrocycles.
Science, 358, 2017
6BEW
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BU of 6bew by Molmil
Solution structure of de novo macrocycle design7.2
分子名称: (DHI)P(DAS)(DGN)(DSN)(DGL)P
著者Shortridge, M.D, Hosseinzadeh, P, Pardo-Avila, F, Varani, G, Baker, D.
登録日2017-10-25
公開日2017-12-27
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Comprehensive computational design of ordered peptide macrocycles.
Science, 358, 2017
6BES
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BU of 6bes by Molmil
Solution structure of de novo macrocycle design11_ss
分子名称: (DAL)Q(DPR)(DCY)(DLY)DS(DTY)(DCY)P(DSN)
著者Shortridge, M.D, Hosseinzadeh, P, Pardo-Avila, F, Varani, G, Baker, D.
登録日2017-10-25
公開日2017-12-27
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Comprehensive computational design of ordered peptide macrocycles.
Science, 358, 2017
6BE9
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BU of 6be9 by Molmil
Solution structure of de novo macrocycle design7.1
分子名称: T(DLY)NDT(DSG)(DPR)
著者Shortridge, M.D, Hosseinzadeh, P, Pardo-Avila, F, Varani, G, Baker, B.
登録日2017-10-24
公開日2017-12-27
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Comprehensive computational design of ordered peptide macrocycles.
Science, 358, 2017
6BET
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BU of 6bet by Molmil
Solution structure of de novo macrocycle design12_ss
分子名称: H(DPR)(DVA)CIP(DPR)E(DLY)VC(DGL)
著者Shortridge, M.D, Hosseinzadeh, P, Pardo-Avila, F, Varani, G, Baker, D.
登録日2017-10-25
公開日2017-12-27
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Comprehensive computational design of ordered peptide macrocycles.
Science, 358, 2017
6BER
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BU of 6ber by Molmil
Solution structure of de novo macrocycle design10.2
分子名称: E(DVA)DP(DGL)(DHI)(DPR)N(DAL)(DPR)
著者Shortridge, M.D, Hosseinzadeh, P, Pardo-Avila, F, Varani, G, Baker, D.
登録日2017-10-25
公開日2017-12-27
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Comprehensive computational design of ordered peptide macrocycles.
Science, 358, 2017
6BEO
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BU of 6beo by Molmil
Solution structure of de novo macrocycle design9.1
分子名称: (DPR)PY(DHI)PKDL(DGN)
著者Shortridge, M.D, Hosseinzadeh, P, Pardo-Avila, F, Varani, G, Baker, D.
登録日2017-10-25
公開日2017-12-27
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Comprehensive computational design of ordered peptide macrocycles.
Science, 358, 2017
1ARJ
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BU of 1arj by Molmil
ARG-BOUND TAR RNA, NMR
分子名称: ARGININE, TAR RNA
著者Aboul-Ela, F, Varani, G, Karn, J.
登録日1995-08-30
公開日1996-11-08
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The structure of the human immunodeficiency virus type-1 TAR RNA reveals principles of RNA recognition by Tat protein.
J.Mol.Biol., 253, 1995
1EKZ
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BU of 1ekz by Molmil
NMR STRUCTURE OF THE COMPLEX BETWEEN THE THIRD DSRBD FROM DROSOPHILA STAUFEN AND A RNA HAIRPIN
分子名称: MATERNAL EFFECT PROTEIN (STAUFEN), STAUFEN DOUBLE-STRANDED RNA BINDING DOMAIN
著者Ramos, A, Grunert, S, Bycroft, M, St Johnston, D, Varani, G.
登録日2000-03-11
公開日2000-08-21
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献RNA recognition by a Staufen double-stranded RNA-binding domain.
EMBO J., 19, 2000
6B3X
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BU of 6b3x by Molmil
Crystal structure of CstF-50 in complex with CstF-77
分子名称: Cleavage stimulation factor subunit 1, Cleavage stimulation factor subunit 3
著者Yang, W, Hsu, P, Yang, F, Song, J.E, Varani, G.
登録日2017-09-25
公開日2017-11-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Reconstitution of the CstF complex unveils a regulatory role for CstF-50 in recognition of 3'-end processing signals.
Nucleic Acids Res., 46, 2018
6C2V
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BU of 6c2v by Molmil
Solution structure of a phosphate-loop protein
分子名称: phosphate-loop protein
著者Yang, F, Yang, W, Lin, Y.R, Romero Romero, M.L, Tawfik, D, Baker, D, Varani, G.
登録日2018-01-09
公開日2018-11-21
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Simple yet functional phosphate-loop proteins.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6C2U
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BU of 6c2u by Molmil
Solution structure of a phosphate-loop protein
分子名称: phosphate-loop protein
著者Yang, F, Yang, W, Lin, Y.R, Romero Romero, M.L, Tawfik, D, Baker, D, Varani, G.
登録日2018-01-09
公開日2018-11-21
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Simple yet functional phosphate-loop proteins.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6D2U
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BU of 6d2u by Molmil
Solution structure of a ultra-high affinity macrocycle bound to HIV-1 TAR RNA
分子名称: DAB-VAL-ARG-THR-ARG-LYS-GLY-ARG-ARG-ILE-NOR-ILE-DPR-PRO, RNA (29-MER)
著者Shortridge, M.D, Varani, G.
登録日2018-04-13
公開日2018-12-12
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献An ultra-high affinity ligand of HIV-1 TAR reveals the RNA structure recognized by P-TEFb.
Nucleic Acids Res., 47, 2019
2J8P
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BU of 2j8p by Molmil
NMR structure of C-terminal domain of human CstF-64
分子名称: CLEAVAGE STIMULATION FACTOR 64 KDA SUBUNIT
著者Qu, X, Perez-Canadillas, J.M, Agrawal, S, De Baecke, J, Cheng, H, Varani, G, Moore, C.
登録日2006-10-27
公開日2006-11-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The C-Terminal Domains of Vertebrate Cstf-64 and its Yeast Orthologue RNA15 Form a New Structure Critical for Mrna 3'-End Processing.
J.Biol.Chem., 282, 2007
2KM4
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BU of 2km4 by Molmil
Solution structure of Rtt103 CTD interacting domain
分子名称: Regulator of Ty1 transposition protein 103
著者Lunde, B.M, Reichow, S, Kim, M, Leeper, T.C, Becker, R, Buratowski, S, Meinhart, A, Varani, G.
登録日2009-07-20
公開日2010-09-08
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Cooperative interaction of transcription termination factors with the RNA polymerase II C-terminal domain.
Nat.Struct.Mol.Biol., 17, 2010
2K8Q
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BU of 2k8q by Molmil
NMR Structure of Shq1p N-terminal domain
分子名称: Protein SHQ1
著者Godin, K.S, Varani, G.
登録日2008-09-18
公開日2009-05-05
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The box H/ACA snoRNP assembly factor Shq1p is a chaperone protein homologous to Hsp90 cochaperones that binds to the Cbf5p enzyme
J.Mol.Biol., 390, 2009
2KE0
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BU of 2ke0 by Molmil
Solution structure of peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei
分子名称: Peptidyl-prolyl cis-trans isomerase
著者Zheng, S, Leeper, T, Napuli, A, Nakazawa, S.H, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2009-01-21
公開日2009-03-03
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The structure of a Burkholderia pseudomallei immunophilin-inhibitor complex reveals new approaches to antimicrobial development.
Biochem.J., 437, 2011

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