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PDB: 110 results

6C2V
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Solution structure of a phosphate-loop protein
Descriptor: phosphate-loop protein
Authors:Yang, F, Yang, W, Lin, Y.R, Romero Romero, M.L, Tawfik, D, Baker, D, Varani, G.
Deposit date:2018-01-09
Release date:2018-11-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Simple yet functional phosphate-loop proteins.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2N6W
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NMR Assignment and structure of CssA Thermometer from Neisseria meningitidis
Descriptor: RNA (68-MER)
Authors:Barnwal, R, Godin, K, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2015-08-28
Release date:2016-08-03
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure and mechanism of a molecular rheostat, an RNA thermometer that modulates immune evasion by Neisseria meningitidis.
Nucleic Acids Res., 44, 2016
2N82
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solution structure of the complex of microRNA 20b pre-element with Rbfox RRM
Descriptor: RNA (5'-R(*GP*GP*UP*AP*GP*UP*UP*UP*UP*GP*GP*CP*AP*UP*GP*AP*CP*UP*CP*UP*AP*CP*C)-3'), RNA binding protein fox-1 homolog 1
Authors:Yang, F, Chen, Y, Varani, G.
Deposit date:2015-09-30
Release date:2016-04-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Rbfox proteins regulate microRNA biogenesis by sequence-specific binding to their precursors and target downstream Dicer.
Nucleic Acids Res., 44, 2016
2OSR
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NMR Structure of RRM-2 of Yeast NPL3 Protein
Descriptor: Nucleolar protein 3
Authors:Deka, P, Bucheli, M, Skrisovska, L, Allain, F.H, Moore, C, Buratowski, S, Varani, G.
Deposit date:2007-02-06
Release date:2007-12-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of the yeast SR protein Npl3 and Interaction with mRNA 3'-end processing signals.
J.Mol.Biol., 375, 2008
2OSQ
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NMR Structure of RRM-1 of Yeast NPL3 Protein
Descriptor: Nucleolar protein 3
Authors:Deka, P, Bucheli, M, Skrisovska, L, Allain, F.H, Moore, C, Buratowski, S, Varani, G.
Deposit date:2007-02-06
Release date:2007-12-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of the yeast SR protein Npl3 and Interaction with mRNA 3'-end processing signals.
J.Mol.Biol., 375, 2008
2LWK
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Solution structure of small molecule-influenza RNA complex
Descriptor: 6,7-dimethoxy-2-(piperazin-1-yl)quinazolin-4-amine, RNA (32-MER)
Authors:Lee, M.-K, Varani, G, Choi, B.-S, Pellecchia, M, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2012-08-01
Release date:2012-08-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A novel small-molecule binds to the influenza A virus RNA promoter and inhibits viral replication.
Chem.Commun.(Camb.), 50, 2014
2N6T
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NMR Assignment and NMR Structure of CssA3 (top stem) of CssA thermometer
Descriptor: RNA (42-MER)
Authors:Barnwal, R, Godin, K, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2015-08-28
Release date:2016-08-03
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure and mechanism of a molecular rheostat, an RNA thermometer that modulates immune evasion by Neisseria meningitidis.
Nucleic Acids Res., 44, 2016
2N6X
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NMR Assignment and structure of CssA5 (middle region) of CssA thermometer from Neisseria meningitidis
Descriptor: RNA (43-MER)
Authors:Barnwal, R, Godin, K, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2015-08-31
Release date:2016-08-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and mechanism of a molecular rheostat, an RNA thermometer that modulates immune evasion by Neisseria meningitidis.
Nucleic Acids Res., 44, 2016
2N6S
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Structure of CssA4 (bottom stem) of CssA thermometer
Descriptor: RNA (36-MER)
Authors:Barnwal, R, Godin, K, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2015-08-28
Release date:2016-08-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and mechanism of a molecular rheostat, an RNA thermometer that modulates immune evasion by Neisseria meningitidis.
Nucleic Acids Res., 44, 2016
2KDQ
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Simultaneous recognition of HIV-1 TAR RNA bulge and loop sequences by cyclic peptide mimic of Tat protein
Descriptor: HIV-1 TAR RNA, L-22 CYCLIC PEPTIDE
Authors:Davidson, A, Leeper, T.C, Varani, G.
Deposit date:2009-01-14
Release date:2009-06-23
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Simultaneous recognition of HIV-1 TAR RNA bulge and loop sequences by cyclic peptide mimics of Tat protein
Proc.Natl.Acad.Sci.USA, 106, 2009
2KX5
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Recognition of HIV TAR RNA by peptide mimetic of Tat protein
Descriptor: Cyclic peptide mimetic of Tat protein, HIV TAR RNA
Authors:Davidson, A, Patora-Komisarska, K, Robinson, J, Varani, G.
Deposit date:2010-04-26
Release date:2010-07-07
Last modified:2024-11-20
Method:SOLUTION NMR
Cite:Essential structural requirements for specific recognition of HIV TAR RNA by peptide mimetics of Tat protein.
Nucleic Acids Res., 39, 2011
2KLX
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Solution structure of glutaredoxin from Bartonella henselae str. Houston
Descriptor: Glutaredoxin
Authors:Leeper, T.C, Varani, G, Zheng, S, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2009-07-10
Release date:2009-07-28
Last modified:2024-11-20
Method:SOLUTION NMR
Cite:Comparative analysis of glutaredoxin domains from bacterial opportunistic pathogens.
Acta Crystallogr.,Sect.F, 67, 2011
2KWL
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Solution Structure of acyl carrier protein from Borrelia burgdorferi
Descriptor: Acyl carrier protein
Authors:Barnwal, R, Vittal, V, Moody, J, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2010-04-12
Release date:2010-04-28
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR structure of an acyl-carrier protein from Borrelia burgdorferi.
Acta Crystallogr.,Sect.F, 67, 2011
2KO7
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Solution structure of peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei complexed with Cycloheximide-N-ethylethanoate
Descriptor: Peptidyl-prolyl cis-trans isomerase, ethyl (4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}-2,6-dioxopiperidin-1-yl)acetate
Authors:Zheng, S, Leeper, T, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2009-09-11
Release date:2009-09-29
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The structure of a Burkholderia pseudomallei immunophilin-inhibitor complex reveals new approaches to antimicrobial development.
Biochem.J., 437, 2011
2LJU
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BU of 2lju by Molmil
Solution structure of putative oxidoreductase from Ehrlichia chaffeensis, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Descriptor: Putative oxidoreductase
Authors:Yang, F, Barnwal, R, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2011-09-29
Release date:2011-10-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of putative oxidoreductase from Ehrlichia chaffeensis
To be Published
2MJ3
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BU of 2mj3 by Molmil
Backbone 1H, 13C, and 15N Chemical Shift Assignments and structure of Iron-sulfur cluster binding protein from Ehrlichia chaffeensis
Descriptor: Iron-sulfur cluster binding protein
Authors:Barnwal, R, Varani, G, Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2013-12-23
Release date:2014-01-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Backbone 1H, 13C, and 15N Chemical Shift Assignments and structure of Iron-sulfur cluster binding protein from Ehrlichia chaffeensis
To be Published
2MCQ
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NMR structure of a BolA-like hypothetical protein RP812 from Rickettsia prowazekii, Seattle structural genomics center for infectious disease (SSGCID)
Descriptor: Uncharacterized protein RP812
Authors:Chen, Y, Barnwal, R, Yang, F, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2013-08-22
Release date:2013-10-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR structure of a BolA-like hypothetical protein RP812 from Rickettsia prowazekii, Seattle structural genomics center for infectious disease (SSGCID)
To be Published
2MRL
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Backbone 1H, 13C, and 15N Chemical Shift Assignments and NMR structure for potential drug target from Burkholderia thailandensis E264
Descriptor: Uncharacterized protein BTH I2711
Authors:Barnwal, R, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2014-07-09
Release date:2014-07-30
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR structure for potential drug target from Burkholderia thailandensis E264
To be Published
2N7X
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Solution structure of microRNA 20b pre-element
Descriptor: RNA (5'-R(*GP*GP*UP*AP*GP*UP*UP*UP*UP*GP*GP*CP*AP*UP*GP*AP*CP*UP*CP*UP*AP*CP*C)-3')
Authors:Yang, F, Chen, Y, Varani, G.
Deposit date:2015-09-25
Release date:2016-04-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Rbfox proteins regulate microRNA biogenesis by sequence-specific binding to their precursors and target downstream Dicer.
Nucleic Acids Res., 44, 2016
2N57
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NMR structure of Acyl carrier protein from Brucella melitensis
Descriptor: Acyl carrier protein
Authors:Barnwal, R, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2015-07-08
Release date:2015-07-22
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR structure of Acyl carrier protein from Brucella melitensis.
To be Published
2N3S
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BU of 2n3s by Molmil
NMR Assignments and structure of Translation initiation factor IF-1 from Burkholderia thailandensis E264.
Descriptor: Translation initiation factor IF-1
Authors:Barnwal, R, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2015-06-09
Release date:2015-06-24
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR Assignments and structure of Translation initiation factor IF-1 from Burkholderia thailandensis E264.
To be Published
2NAX
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Structure of CCHC zinc finger domain of Pcf11
Descriptor: Protein PCF11, ZINC ION
Authors:Yang, F, Varani, G.
Deposit date:2016-01-12
Release date:2016-11-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The C terminus of Pcf11 forms a novel zinc-finger structure that plays an essential role in mRNA 3'-end processing.
RNA, 23, 2017
2MRC
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NMR Structure and 1H, 13C and 15N Chemical Shift Assignments for High mobility group protein from Plasmodium falciparum 3D7.
Descriptor: High mobility group protein
Authors:Tang, C, Barnwal, R, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2014-07-02
Release date:2014-07-16
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR Structure and 1H, 13C and 15N Chemical Shift Assignments for High mobility group protein from Plasmodium falciparum 3D7.
To be Published
2MZY
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1H, 13C, and 15N Chemical Shift Assignments and structure of Probable Fe(2+)-trafficking protein from Burkholderia pseudomallei 1710b.
Descriptor: Probable Fe(2+)-trafficking protein
Authors:Tang, C, Yang, F, Barnwal, R, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2015-02-26
Release date:2015-03-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of Probable Fe(2+)-trafficking protein
To be Published
2L8H
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Chemical probe bound to HIV TAR RNA
Descriptor: 4-methoxynaphthalen-2-amine, ARGININE, HIV TAR RNA
Authors:Davidson, A, Begley, D, Lau, C, Varani, G.
Deposit date:2011-01-12
Release date:2011-03-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A Small-Molecule Probe Induces a Conformation in HIV TAR RNA Capable of Binding Drug-Like Fragments.
J.Mol.Biol., 410, 2011

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