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PDB: 531 件

3B1K
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BU of 3b1k by Molmil
Crystal structure of Glyceraldehyde-3-Phosphate Dehydrogenase complexed with CP12 in the absence of copper from Synechococcus elongatus
分子名称: CP12, Glyceraldehyde 3-phosphate dehydrogenase (NADP+), NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Matsumura, H, Kai, A, Inoue, T.
登録日2011-07-04
公開日2012-01-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.302 Å)
主引用文献Structure Basis for the Regulation of Glyceraldehyde-3-Phosphate Dehydrogenase Activity via the Intrinsically Disordered Protein CP12.
Structure, 19, 2011
3B1J
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Crystal structure of Glyceraldehyde-3-Phosphate Dehydrogenase complexed with CP12 in the presence of copper from Synechococcus elongatus
分子名称: COPPER (II) ION, CP12, Glyceraldehyde 3-phosphate dehydrogenase (NADP+), ...
著者Matsumura, H, Kai, A, Inoue, T.
登録日2011-07-04
公開日2012-01-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure Basis for the Regulation of Glyceraldehyde-3-Phosphate Dehydrogenase Activity via the Intrinsically Disordered Protein CP12.
Structure, 19, 2011
2ZA0
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BU of 2za0 by Molmil
Crystal structure of mouse glyoxalase I complexed with methyl-gerfelin
分子名称: Glyoxalase I, ZINC ION, methyl 4-(2,3-dihydroxy-5-methylphenoxy)-2-hydroxy-6-methylbenzoate
著者Okumura, H, Kawatani, M, Osada, H.
登録日2007-09-26
公開日2008-08-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The identification of an osteoclastogenesis inhibitor through the inhibition of glyoxalase I
Proc.Natl.Acad.Sci.Usa, 105, 2008
3VTF
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BU of 3vtf by Molmil
Structure of a UDP-glucose dehydrogenase from the hyperthermophilic archaeon Pyrobaculum islandicum
分子名称: 1,2-ETHANEDIOL, UDP-glucose 6-dehydrogenase, URIDINE-5'-DIPHOSPHATE-GLUCOSE
著者Sakuraba, H, Ohshima, T, Yoneda, K.
登録日2012-05-29
公開日2012-09-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of a UDP-glucose dehydrogenase from the hyperthermophilic archaeon Pyrobaculum islandicum.
Acta Crystallogr.,Sect.F, 68, 2012
3WRV
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BU of 3wrv by Molmil
Crystal structure of NN domain of resistance protein
分子名称: Tm-1 protein
著者Matsumura, H, Katoh, E.
登録日2014-02-27
公開日2014-08-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural basis for the recognition-evasion arms race between Tomato mosaic virus and the resistance gene Tm-1
Proc.Natl.Acad.Sci.USA, 111, 2014
3ACL
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BU of 3acl by Molmil
Crystal Structure of Human Pirin in complex with Triphenyl Compound
分子名称: FE (II) ION, N-{[4-(benzyloxy)phenyl](methyl)-lambda~4~-sulfanylidene}-4-methylbenzenesulfonamide, Pirin
著者Okumura, H, Miyazaki, I, Simizu, S, Osada, H.
登録日2010-01-05
公開日2010-08-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献A small-molecule inhibitor shows that pirin regulates migration of melanoma cells
Nat.Chem.Biol., 6, 2010
2ZHP
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BU of 2zhp by Molmil
Crystal structure of bleomycin-binding protein from Streptoalloteichus hindustanus complexed with bleomycin derivative
分子名称: Bleomycin resistance protein, CHLORIDE ION, COPPER (II) ION, ...
著者Okumura, H, Miyazaki, I, Simizu, S, Osada, H.
登録日2008-02-06
公開日2009-02-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure-Affinity Relationship Study of Bleomycins and Shble protein Using a Chemical Array
To be Published
2Z5G
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BU of 2z5g by Molmil
Crystal structure of T1 lipase F16L mutant
分子名称: CALCIUM ION, CHLORIDE ION, Thermostable lipase, ...
著者Matsumura, H, Yamamoto, T, Inoue, T, Kai, Y.
登録日2007-07-08
公開日2007-10-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Novel cation-pi interaction revealed by crystal structure of thermoalkalophilic lipase
Proteins, 70, 2007
3AW9
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BU of 3aw9 by Molmil
Structure of UDP-galactose 4-epimerase mutant
分子名称: GALACTOSE-URIDINE-5'-DIPHOSPHATE, NAD-dependent epimerase/dehydratase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Sakuraba, H, Kawai, T, Yoneda, K, Ohshima, T.
登録日2011-03-15
公開日2012-02-29
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of UDP-galactose 4-epimerase mutant
To be Published
3A74
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BU of 3a74 by Molmil
Lysyl-tRNA synthetase from Bacillus stearothermophilus complexed with Diadenosine Tetraphosphate (AP4A)
分子名称: 2,6-DIAMINO-HEXANOIC ACID AMIDE, BIS(ADENOSINE)-5'-TETRAPHOSPHATE, Lysyl-tRNA synthetase, ...
著者Sakurama, H, Takita, T, Mikami, B, Itoh, T, Yasukawa, K, Inouye, K.
登録日2009-09-13
公開日2010-09-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of Lysyl-tRNA Synthetase from Bacillus stearothermophilus in Complex with Diadenosine Tetraphosphate (AP4A): Insights into AP4A Synthesis Mechanisms and Implication for Recognition of Discriminator Base of tRNA^Lys
To be Published
2ZVR
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BU of 2zvr by Molmil
Crystal structure of a D-tagatose 3-epimerase-related protein from Thermotoga maritima
分子名称: Uncharacterized protein TM_0416
著者Sakuraba, H, Ohshima, T.
登録日2008-11-14
公開日2009-03-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of a D-tagatose 3-epimerase-related protein from the hyperthermophilic bacterium Thermotoga maritima
Acta Crystallogr.,Sect.F, 65, 2009
3A9H
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BU of 3a9h by Molmil
Crystal Structure of PQQ-dependent sugar dehydrogenase holo-form
分子名称: CALCIUM ION, PYRROLOQUINOLINE QUINONE, Putative uncharacterized protein, ...
著者Sakuraba, H, Yokono, K, Yoneda, K, Ohshima, T.
登録日2009-10-26
公開日2010-09-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Catalytic properties and crystal structure of quinoprotein aldose sugar dehydrogenase from hyperthermophilic archaeon Pyrobaculum aerophilum
Arch.Biochem.Biophys., 502, 2010
3A9G
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BU of 3a9g by Molmil
Crystal Structure of PQQ-dependent sugar dehydrogenase apo-form
分子名称: CALCIUM ION, Putative uncharacterized protein, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
著者Sakuraba, H, Yokono, K, Yoneda, K, Ohshima, T.
登録日2009-10-26
公開日2010-09-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Catalytic properties and crystal structure of quinoprotein aldose sugar dehydrogenase from hyperthermophilic archaeon Pyrobaculum aerophilum
Arch.Biochem.Biophys., 502, 2010
3AW5
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BU of 3aw5 by Molmil
Structure of a multicopper oxidase from the hyperthermophilic archaeon Pyrobaculum aerophilum
分子名称: ACETATE ION, COPPER (II) ION, CU-O-CU LINKAGE, ...
著者Sakuraba, H, Ohshima, T, Yoneda, K.
登録日2011-03-10
公開日2011-06-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of a multicopper oxidase from the hyperthermophilic archaeon Pyrobaculum aerophilum
Acta Crystallogr.,Sect.F, 67, 2011
1GIR
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BU of 1gir by Molmil
CRYSTAL STRUCTURE OF THE ENZYMATIC COMPONET OF IOTA-TOXIN FROM CLOSTRIDIUM PERFRINGENS WITH NADPH
分子名称: IOTA TOXIN COMPONENT IA, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Tsuge, H, Nagahama, M, Nishimura, H, Hisatsune, J, Sakaguchi, Y, Itogawa, Y, Katunuma, N, Sakurai, J.
登録日2001-03-12
公開日2003-01-14
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure and Site-directed Mutagenesis of Enzymatic Components from Clostridium perfringens Iota-toxin
J.MOL.BIOL., 325, 2003
2E2G
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BU of 2e2g by Molmil
Crystal structure of archaeal peroxiredoxin, thioredoxin peroxidase from Aeropyrum pernix K1 (pre-oxidation form)
分子名称: Probable peroxiredoxin
著者Nakamura, T, Yamamoto, T, Abe, M, Matsumura, H, Hagihara, Y, Goto, T, Yamaguchi, T, Inoue, T.
登録日2006-11-13
公開日2007-11-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate
Proc.Natl.Acad.Sci.Usa, 105, 2008
6L98
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BU of 6l98 by Molmil
Crystalline cast nephropathy-causing Bence-Jones protein AK: An entire immunoglobulin lambda light chain dimer
分子名称: Bence-Jones protein lambda light chain AK
著者Nakagaki, T, Noguchi, K, Yohda, M, Odaka, M, Wakui, H, Matsumura, H.
登録日2019-11-08
公開日2020-09-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Multiple Myeloma-Associated Ig Light Chain Crystalline Cast Nephropathy.
Kidney Int Rep, 5, 2020
2E2M
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BU of 2e2m by Molmil
Crystal structure of archaeal peroxiredoxin, thioredoxin peroxidase from Aeropyrum pernix K1 (sulfinic acid form)
分子名称: Probable peroxiredoxin
著者Nakamura, T, Yamamoto, T, Abe, M, Matsumura, H, Hagihara, Y, Goto, T, Yamaguchi, T, Inoue, T.
登録日2006-11-14
公開日2007-11-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Oxidation of archaeal peroxiredoxin involves a hypervalent sulfur intermediate
Proc.Natl.Acad.Sci.Usa, 105, 2008
4ELD
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BU of 4eld by Molmil
Crystal Structure of an Activated Variant of Small Heat Shock Protein Hsp16.5
分子名称: Small heat shock protein HSP16.5
著者Spiller, B.W, Mchaourab, H.S, Lin, Y.-L.
登録日2012-04-10
公開日2012-06-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.701 Å)
主引用文献Crystal structure of an activated variant of small heat shock protein hsp16.5.
Biochemistry, 51, 2012
4Z34
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BU of 4z34 by Molmil
Crystal Structure of Human Lysophosphatidic Acid Receptor 1 in complex with ONO9780307
分子名称: (2S)-2,3-dihydroxypropyl (7Z)-tetradec-7-enoate, Lysophosphatidic acid receptor 1, Soluble cytochrome b562, ...
著者Chrencik, J.E, Roth, C.B, Terakado, M, Kurata, H, Omi, R, Kihara, Y, Warshaviak, D, Nakade, S, Asmar-Rovira, G, Mileni, M, Mizuno, H, Griffith, M.T, Rodgers, C, Han, G.W, Velasquez, J, Chun, J, Stevens, R.C, Hanson, M.A, GPCR Network (GPCR)
登録日2015-03-30
公開日2015-06-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal Structure of Antagonist Bound Human Lysophosphatidic Acid Receptor 1.
Cell, 161, 2015
5HPL
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BU of 5hpl by Molmil
System-wide modulation of HECT E3 ligases with selective ubiquitin variant probes: Rsp5 and UbV R5.4
分子名称: Rsp5, Ubiquitin variant R5.4
著者Wu, K.-P, Kamadurai, H.B, Schulman, B.A.
登録日2016-01-20
公開日2016-03-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献System-Wide Modulation of HECT E3 Ligases with Selective Ubiquitin Variant Probes.
Mol.Cell, 62, 2016
1V9L
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BU of 1v9l by Molmil
L-glutamate dehydrogenase from Pyrobaculum islandicum complexed with NAD
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, glutamate dehydrogenase
著者Bhuiya, M.W, Sakuraba, H, Ohshima, T, Imagawa, T, Katunuma, N, Tsuge, H.
登録日2004-01-26
公開日2004-12-14
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The First Crystal Structure of Hyperthermostable NAD-dependent Glutamate Dehydrogenase from Pyrobaculum islandicum
J.Mol.Biol., 345, 2005
4ZXO
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BU of 4zxo by Molmil
The structure of a GH26 beta-mannanase from Bacteroides ovatus, BoMan26A.
分子名称: Glycosyl hydrolase family 26, PHOSPHATE ION, POTASSIUM ION
著者Bagenholm, V, Aurelius, O, Logan, D.T, Bouraoui, H, Stalbrand, H.
登録日2015-05-20
公開日2016-06-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Galactomannan Catabolism Conferred by a Polysaccharide Utilization Locus of Bacteroides ovatus: ENZYME SYNERGY AND CRYSTAL STRUCTURE OF A beta-MANNANASE.
J. Biol. Chem., 292, 2017
6M4E
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BU of 6m4e by Molmil
Crystal structure of a GH1 beta-glucosidase from Hamamotoa singularis
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Uehara, R, Iwamoto, R, Aoki, S, Yoshizawa, T, Takano, K, Matsumura, H, Tanaka, S.-i.
登録日2020-03-06
公開日2020-09-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of a GH1 beta-glucosidase from Hamamotoa singularis.
Protein Sci., 29, 2020
6M55
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Crystal structure of the E496A mutant of HsBglA in complex with 4-galactosyllactose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-galactosidase-like enzyme, ...
著者Uehara, R, Iwamoto, R, Aoki, S, Yoshizawa, T, Takano, K, Matsumura, H, Tanaka, S.-i.
登録日2020-03-10
公開日2020-09-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of a GH1 beta-glucosidase from Hamamotoa singularis.
Protein Sci., 29, 2020

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