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PDB: 537 件

5XDU
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Staphylococcus aureus FtsZ 12-316 complexed with TXA6101
分子名称: 3-[[5-bromanyl-4-[4-(trifluoromethyl)phenyl]-1,3-oxazol-2-yl]methoxy]-2,6-bis(fluoranyl)benzamide, CALCIUM ION, Cell division protein FtsZ, ...
著者Fujita, J, Maeda, Y, Mizohata, E, Inoue, T, Kaul, M, Parhi, A.K, LaVoie, E.J, Pilch, D.S, Matsumura, H.
登録日2017-03-30
公開日2017-08-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Flexibility of an Inhibitor Overcomes Drug Resistance Mutations in Staphylococcus aureus FtsZ
ACS Chem. Biol., 12, 2017
5XDT
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Staphylococcus aureus FtsZ 12-316 complexed with TXA707
分子名称: 1-methylpyrrolidin-2-one, 2,6-bis(fluoranyl)-3-[[6-(trifluoromethyl)-[1,3]thiazolo[5,4-b]pyridin-2-yl]methoxy]benzamide, CALCIUM ION, ...
著者Fujita, J, Maeda, Y, Mizohata, E, Inoue, T, Kaul, M, Parhi, A.K, LaVoie, E.J, Pilch, D.S, Matsumura, H.
登録日2017-03-30
公開日2017-08-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural Flexibility of an Inhibitor Overcomes Drug Resistance Mutations in Staphylococcus aureus FtsZ
ACS Chem. Biol., 12, 2017
5XDV
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Staphylococcus aureus FtsZ 12-316 G196S complexed with TXA6101
分子名称: 3-[[5-bromanyl-4-[4-(trifluoromethyl)phenyl]-1,3-oxazol-2-yl]methoxy]-2,6-bis(fluoranyl)benzamide, CALCIUM ION, Cell division protein FtsZ, ...
著者Fujita, J, Maeda, Y, Mizohata, E, Inoue, T, Kaul, M, Parhi, A.K, LaVoie, E.J, Pilch, D.S, Matsumura, H.
登録日2017-03-30
公開日2017-08-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural Flexibility of an Inhibitor Overcomes Drug Resistance Mutations in Staphylococcus aureus FtsZ
ACS Chem. Biol., 12, 2017
5XDW
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Staphylococcus aureus FtsZ 12-316 G196S
分子名称: CALCIUM ION, Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
著者Fujita, J, Maeda, Y, Mizohata, E, Inoue, T, Kaul, M, Parhi, A.K, LaVoie, E.J, Pilch, D.S, Matsumura, H.
登録日2017-03-30
公開日2017-08-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Flexibility of an Inhibitor Overcomes Drug Resistance Mutations in Staphylococcus aureus FtsZ
ACS Chem. Biol., 12, 2017
2D4A
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BU of 2d4a by Molmil
Structure of the malate dehydrogenase from Aeropyrum pernix
分子名称: Malate dehydrogenase
著者Kawakami, R, Sakuraba, H, Tsuge, H, Ohshima, T.
登録日2005-10-12
公開日2006-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献Refolding, characterization and crystal structure of (S)-malate dehydrogenase from the hyperthermophilic archaeon Aeropyrum pernix.
Biochim.Biophys.Acta, 1794, 2009
2DC1
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BU of 2dc1 by Molmil
Crystal Structure Of L-Aspartate Dehydrogenase From Hyperthermophilic Archaeon Archaeoglobus fulgidus
分子名称: CITRIC ACID, L-aspartate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Yoneda, K, Sakuraba, H, Tsuge, H, Ohshima, T.
登録日2005-12-19
公開日2006-12-26
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of archaeal highly thermostable L-aspartate dehydrogenase/NAD/citrate ternary complex.
Febs J., 274, 2007
5YCH
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Ancestral myoglobin aMbWb of Basilosaurus relative (monophyly)
分子名称: Ancestral myoglobin aMbWb of Basilosaurus relative (monophyly), PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
著者Isogai, Y, Imamura, H, Nakae, S, Sumi, T, Takahashi, K, Nakagawa, T, Tsuneshige, A, Shirai, T.
登録日2017-09-07
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.354 Å)
主引用文献Tracing whale myoglobin evolution by resurrecting ancient proteins.
Sci Rep, 8, 2018
5YCG
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Ancestral myoglobin aMbWp of Pakicetus relative
分子名称: Ancestral myoglobin aMbWp of Pakicetus relative, PROTOPORPHYRIN IX CONTAINING FE
著者Isogai, Y, Imamura, H, Nakae, S, Sumi, T, Takahashi, K, Nakagawa, T, Tsuneshige, A, Shirai, T.
登録日2017-09-07
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Tracing whale myoglobin evolution by resurrecting ancient proteins.
Sci Rep, 8, 2018
2DF5
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Crystal Structure of Pf-PCP(1-204)-C
分子名称: Pyrrolidone-carboxylate peptidase
著者Katagiri, Y, Takano, K, Chon, H, Matsumura, H, Koga, Y, Kanaya, S.
登録日2006-02-24
公開日2007-03-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Conformational contagion in a protein: structural properties of a chameleon sequence
Proteins, 68, 2007
5YCI
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Ancestral myoglobin aMbWb' of Basilosaurus relative (polyphyly)
分子名称: Ancestral myoglobin aMbWb' of Basilosaurus relative (polyphyly), PROTOPORPHYRIN IX CONTAINING FE
著者Isogai, Y, Imamura, H, Nakae, S, Sumi, T, Takahashi, K, Nakagawa, T, Tsuneshige, A, Shirai, T.
登録日2017-09-07
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Tracing whale myoglobin evolution by resurrecting ancient proteins.
Sci Rep, 8, 2018
5YCE
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BU of 5yce by Molmil
Sperm whale myoglobin swMb
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
著者Isogai, Y, Imamura, H, Nakae, S, Sumi, T, Takahashi, K, Nakagawa, T, Tsuneshige, A, Shirai, T.
登録日2017-09-07
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.77 Å)
主引用文献Tracing whale myoglobin evolution by resurrecting ancient proteins.
Sci Rep, 8, 2018
1L2L
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BU of 1l2l by Molmil
Crystal structure of ADP-dependent glucokinase from a Pyrococcus Horikoshii
分子名称: ADP-dependent Glucokinase
著者Tsuge, H, Sakuraba, H, Katunuma, N, Ohshima, T.
登録日2002-02-22
公開日2002-12-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the ADP-dependent glucokinase from Pyrococcus horikoshii at 2.0-A resolution: a large conformational change in ADP-dependent glucokinase
PROTEIN SCI., 11, 2002
1RCK
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BU of 1rck by Molmil
THE THREE DIMENSIONAL STRUCTURE OF GUANINE-SPECIFIC RIBONUCLEASE F1 IN SOLUTION DETERMINED BY NMR SPECTROSCOPY AND DISTANCE GEOMETRY
分子名称: RIBONUCLEASE F1
著者Nakai, T, Yoshikawa, W, Nakamura, H, Yoshida, H.
登録日1994-08-08
公開日1994-11-30
最終更新日2019-12-25
実験手法SOLUTION NMR
主引用文献The three-dimensional structure of guanine-specific ribonuclease F1 in solution determined by NMR spectroscopy and distance geometry.
Eur.J.Biochem., 208, 1992
1R5Z
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BU of 1r5z by Molmil
Crystal Structure of Subunit C of V-ATPase
分子名称: V-type ATP synthase subunit C
著者Iwata, M, Imamura, H, Stambouli, E, Ikeda, C, Tamakoshi, M, Nagata, K, Makyio, H, Hankamer, B, Barber, J, Yoshida, M, Yokoyama, K, Iwata, S.
登録日2003-10-14
公開日2004-01-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of a central stalk subunit C and reversible association/dissociation of vacuole-type ATPase.
Proc.Natl.Acad.Sci.Usa, 101, 2004
1RCL
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THE THREE DIMENSIONAL STRUCTURE OF GUANINE-SPECIFIC RIBONUCLEASE F1 IN SOLUTION DETERMINED BY NMR SPECTROSCOPY AND DISTANCE GEOMETRY
分子名称: RIBONUCLEASE F1
著者Nakai, T, Yoshikawa, W, Nakamura, H, Yoshida, H.
登録日1994-08-08
公開日1994-11-30
最終更新日2019-12-25
実験手法SOLUTION NMR
主引用文献The three-dimensional structure of guanine-specific ribonuclease F1 in solution determined by NMR spectroscopy and distance geometry.
Eur.J.Biochem., 208, 1992
2ZF5
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BU of 2zf5 by Molmil
Crystal Structure of highly thermostable glycerol kinase from a hyperthermophilic archaeon
分子名称: Glycerol kinase
著者Koga, Y, Katsumi, R, You, D.-J, Matsumura, H, Takano, K, Kanaya, S.
登録日2007-12-20
公開日2008-05-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of highly thermostable glycerol kinase from a hyperthermophilic archaeon in a dimeric form
Febs J., 275, 2008
5XVH
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BU of 5xvh by Molmil
Crystal structure of the NADP+ and tartrate-bound complex of L-serine 3-dehydrogenase from the hyperthermophilic archaeon Pyrobaculum calidifontis
分子名称: 6-phosphogluconate dehydrogenase, NAD-binding protein, ACETIC ACID, ...
著者Yoneda, K, Sakuraba, H, Ohshima, T.
登録日2017-06-28
公開日2018-02-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Crystal structure of the NADP+and tartrate-bound complex of L-serine 3-dehydrogenase from the hyperthermophilic archaeon Pyrobaculum calidifontis.
Extremophiles, 22, 2018
2E1P
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BU of 2e1p by Molmil
Crystal structure of pro-Tk-subtilisin
分子名称: CALCIUM ION, Tk-subtilisin
著者Tanaka, S, Saito, K, Chon, H, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
登録日2006-10-27
公開日2007-01-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of unautoprocessed precursor of subtilisin from a hyperthermophilic archaeon: evidence for Ca2+-induced folding
J.Biol.Chem., 282, 2007
1IWO
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BU of 1iwo by Molmil
Crystal structure of the SR Ca2+-ATPase in the absence of Ca2+
分子名称: OCTANOIC ACID [3S-[3ALPHA, 3ABETA, 4ALPHA, ...
著者Toyoshima, C, Nomura, H.
登録日2002-05-26
公開日2002-08-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural changes in the calcium pump accompanying the dissociation of calcium
Nature, 418, 2002
2D00
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Subunit F of V-type ATPase/synthase
分子名称: CALCIUM ION, V-type ATP synthase subunit F
著者Makyio, H, Iino, R, Ikeda, C, Imamura, H, Tamakoshi, M, Iwata, M, Stock, D, Bernal, R.A, Carpenter, E.P, Yoshida, M, Yokoyama, K, Iwata, S.
登録日2005-07-21
公開日2005-12-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of a central stalk subunit F of prokaryotic V-type ATPase/synthase from Thermus thermophilus
Embo J., 24, 2005
2CWF
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BU of 2cwf by Molmil
Crystal Structure of delta1-piperideine-2-carboxylate reductase from Pseudomonas syringae complexed with NADPH
分子名称: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, delta1-piperideine-2-carboxylate reductase
著者Goto, M, Muramatsu, H, Mihara, H, Kurihara, T, Esaki, N, Omi, R, Miyahara, I, Hirotsu, K.
登録日2005-06-20
公開日2005-10-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of Delta1-piperideine-2-carboxylate/Delta1-pyrroline-2-carboxylate reductase belonging to a new family of NAD(P)H-dependent oxidoreductases: conformational change, substrate recognition, and stereochemistry of the reaction
J.Biol.Chem., 280, 2005
2DFI
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Crystal structure of Pf-MAP(1-292)-C
分子名称: COBALT (II) ION, Methionine aminopeptidase
著者Katagiri, Y, Takano, K, Chon, H, Matsumura, H, Koga, Y, Kanaya, S.
登録日2006-03-01
公開日2007-03-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Conformational contagion in a protein: Structural properties of a chameleon sequence
Proteins, 68, 2007
2E5V
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Crystal structure of L-Aspartate Oxidase from hyperthermophilic archaeon Sulfolobus tokodaii
分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, L-aspartate oxidase
著者Yoneda, K, Sakuraba, H, Asai, I, Tsuge, H, Katunuma, N, Ohshima, T.
登録日2006-12-25
公開日2008-01-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Structure of l-aspartate oxidase from the hyperthermophilic archaeon Sulfolobus tokodaii
Biochim.Biophys.Acta, 1784, 2008
2DFH
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Crystal structure of Tk-RNase HII(1-212)-C
分子名称: Ribonuclease HII
著者Katagiri, Y, Takano, K, Chon, H, Matsumura, H, Koga, Y, Kanaya, S.
登録日2006-03-01
公開日2007-03-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Conformational contagion in a protein: Structural properties of a chameleon sequence
Proteins, 68, 2007
1UCQ
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Crystal structure of the L intermediate of bacteriorhodopsin
分子名称: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, RETINAL, ...
著者Kouyama, T, Nishikawa, T, Tokuhisa, T, Okumura, H.
登録日2003-04-17
公開日2003-12-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of the L Intermediate of Bacteriorhodopsin: Evidence for Vertical Translocation of a Water Molecule during the Proton Pumping Cycle.
J.Mol.Biol., 335, 2004

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件を2024-09-04に公開中

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