3STL
| KcsA potassium channel mutant Y82C with Cadmium bound | Descriptor: | CADMIUM ION, POTASSIUM ION, Voltage-gated potassium channel, ... | Authors: | Raghuraman, H, Cordero-Morales, J, Jogini, V, Perozo, E. | Deposit date: | 2011-07-11 | Release date: | 2012-04-18 | Last modified: | 2012-10-03 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Mechanism of Cd(2+) Coordination during Slow Inactivation in Potassium Channels. Structure, 20, 2012
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8KAQ
| Glycoside hydrolase family 1 beta-glucosidase (E318G mutant) from Streptomyces griseus (sophorose complex) | Descriptor: | CHLORIDE ION, Putative beta-glucosidase, TRIETHYLENE GLYCOL, ... | Authors: | Kumakura, H, Motouchi, S, Nakai, H, Nakajima, M. | Deposit date: | 2023-08-03 | Release date: | 2024-08-07 | Method: | X-RAY DIFFRACTION (2.13 Å) | Cite: | Identification of beta-1,2-glucan-associated glycoside hydrolase family 1 beta-glucosidase from Streptomyces griseus To Be Published
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8KAP
| Glycoside hydrolase family 1 beta-glucosidase from Streptomyces griseus (ligand-free) | Descriptor: | 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, ... | Authors: | Kumakura, H, Motouchi, S, Nakai, H, Nakajima, M. | Deposit date: | 2023-08-03 | Release date: | 2024-08-07 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Identification of beta-1,2-glucan-associated glycoside hydrolase family 1 beta-glucosidase from Streptomyces griseus To Be Published
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4LCD
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8HYE
| Structure of amino acid dehydrogenase-2752 with ligand | Descriptor: | 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Alanine dehydrogenase, ... | Authors: | Sakuraba, H, Ohshima, T. | Deposit date: | 2023-01-06 | Release date: | 2023-04-05 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Two different alanine dehydrogenases from Geobacillus kaustophilus: Their biochemical characteristics and differential expression in vegetative cells and spores. Biochim Biophys Acta Proteins Proteom, 1871, 2023
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8J1C
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8J1G
| Structure of amino acid dehydrogenase in complex with NADPH | Descriptor: | 1,2-ETHANEDIOL, ARGININE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... | Authors: | Sakuraba, H, Ohshima, T. | Deposit date: | 2023-04-12 | Release date: | 2023-08-16 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | First crystal structure of an NADP + -dependent l-arginine dehydrogenase belonging to the mu-crystallin family. Int.J.Biol.Macromol., 249, 2023
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3AXB
| Structure of a dye-linked L-proline dehydrogenase from the aerobic hyperthermophilic archaeon, Aeropyrum pernix | Descriptor: | 1,2-ETHANEDIOL, FLAVIN-ADENINE DINUCLEOTIDE, PROLINE, ... | Authors: | Sakuraba, H, Ohshima, T, Satomura, T, Yoneda, K, Hara, Y. | Deposit date: | 2011-04-01 | Release date: | 2012-04-04 | Last modified: | 2017-10-11 | Method: | X-RAY DIFFRACTION (1.92 Å) | Cite: | Crystal Structure of Novel Dye-linked L-Proline Dehydrogenase from Hyperthermophilic Archaeon Aeropyrum pernix J.Biol.Chem., 287, 2012
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8KAR
| Glutamate dehydrogenase-AKG | Descriptor: | 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, Glutamate dehydrogenase, ... | Authors: | Sakuraba, H, Ohshima, T. | Deposit date: | 2023-08-03 | Release date: | 2024-08-07 | Method: | X-RAY DIFFRACTION (1.73 Å) | Cite: | Structure of glutamate dehydrogenase-AKG To be published
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8KAO
| Glutamate dehydrogenase-69O | Descriptor: | 2-oxopentanoic acid, Glutamate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE | Authors: | Sakuraba, H, Ohshima, T. | Deposit date: | 2023-08-03 | Release date: | 2024-08-07 | Method: | X-RAY DIFFRACTION (2.55 Å) | Cite: | Structure of glutamate dehydrogenase-69O To be published
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2OXO
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3E9I
| Lysyl-tRNA synthetase from Bacillus stearothermophilus complexed with L-Lysine hydroxamate-AMP | Descriptor: | 5'-O-{(R)-hydroxy[(L-lysylamino)oxy]phosphoryl}adenosine, Lysyl-tRNA synthetase, MAGNESIUM ION, ... | Authors: | Sakurama, H, Takita, T, Mikami, B, Itoh, T, Yasukawa, K, Inouye, K. | Deposit date: | 2008-08-22 | Release date: | 2009-07-14 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Two crystal structures of lysyl-tRNA synthetase from Bacillus stearothermophilus in complex with lysyladenylate-like compounds: insights into the irreversible formation of the enzyme-bound adenylate of L-lysine hydroxamate J.Biochem., 145, 2009
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3E9H
| Lysyl-tRNA synthetase from Bacillus stearothermophilus complexed with L-Lysylsulfamoyl adenosine | Descriptor: | 5'-O-[(L-LYSYLAMINO)SULFONYL]ADENOSINE, Lysyl-tRNA synthetase, MAGNESIUM ION | Authors: | Sakurama, H, Takita, T, Mikami, B, Itoh, T, Yasukawa, K, Inouye, K. | Deposit date: | 2008-08-22 | Release date: | 2009-07-14 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Two crystal structures of lysyl-tRNA synthetase from Bacillus stearothermophilus in complex with lysyladenylate-like compounds: insights into the irreversible formation of the enzyme-bound adenylate of L-lysine hydroxamate J.Biochem., 145, 2009
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5YAE
| Ferulic acid esterase from Streptomyces cinnamoneus at 2.4 A resolution | Descriptor: | ACETATE ION, Esterase, SULFATE ION | Authors: | Tamura, H, Uraji, M, Mizohata, E, Ogawa, K, Inoue, T, Hatanaka, T. | Deposit date: | 2017-08-31 | Release date: | 2017-12-06 | Last modified: | 2018-01-31 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Loop of Streptomyces Feruloyl Esterase Plays an Important Role in the Enzyme's Catalyzing the Release of Ferulic Acid from Biomass. Appl. Environ. Microbiol., 84, 2018
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5YAL
| Ferulic acid esterase from Streptomyces cinnamoneus at 1.5 A resolution | Descriptor: | ACETATE ION, Esterase, GLYCEROL, ... | Authors: | Tamura, H, Uraji, M, Mizohata, E, Ogawa, K, Inoue, T, Hatanaka, T. | Deposit date: | 2017-09-01 | Release date: | 2017-12-06 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Loop of Streptomyces Feruloyl Esterase Plays an Important Role in the Enzyme's Catalyzing the Release of Ferulic Acid from Biomass. Appl. Environ. Microbiol., 84, 2018
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5Z6B
| Crystal structure of sugar-binding protein YesO in complex with rhamnogalacturonan trisaccharide | Descriptor: | 2,6-anhydro-3-deoxy-L-threo-hex-2-enonic acid-(1-2)-[beta-D-galactopyranose-(1-4)]alpha-L-rhamnopyranose, Putative ABC transporter substrate-binding protein YesO | Authors: | Sugiura, H, Oiki, S, Mikami, B, Murata, K, Hashimoto, W. | Deposit date: | 2018-01-22 | Release date: | 2019-01-23 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.582 Å) | Cite: | Crystal structure of sugar-binding protein YesO in complex with rhamnogalacturonan trisaccharide To Be Published
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5Z6C
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2ZC0
| Crystal structure of an archaeal alanine:glyoxylate aminotransferase | Descriptor: | 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Alanine glyoxylate transaminase, IMIDAZOLE, ... | Authors: | Sakuraba, H, Yoneda, K, Tsuge, H, Ohshima, T. | Deposit date: | 2007-10-31 | Release date: | 2008-06-17 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Structure of an archaeal alanine:glyoxylate aminotransferase Acta Crystallogr.,Sect.D, 64, 2008
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2ZA0
| Crystal structure of mouse glyoxalase I complexed with methyl-gerfelin | Descriptor: | Glyoxalase I, ZINC ION, methyl 4-(2,3-dihydroxy-5-methylphenoxy)-2-hydroxy-6-methylbenzoate | Authors: | Okumura, H, Kawatani, M, Osada, H. | Deposit date: | 2007-09-26 | Release date: | 2008-08-12 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | The identification of an osteoclastogenesis inhibitor through the inhibition of glyoxalase I Proc.Natl.Acad.Sci.Usa, 105, 2008
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8HYH
| Structure of amino acid dehydrogenase3448 | Descriptor: | 1,2-ETHANEDIOL, Alanine dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... | Authors: | Sakuraba, H, Ohshima, T. | Deposit date: | 2023-01-06 | Release date: | 2023-04-05 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (2.39 Å) | Cite: | Two different alanine dehydrogenases from Geobacillus kaustophilus: Their biochemical characteristics and differential expression in vegetative cells and spores. Biochim Biophys Acta Proteins Proteom, 1871, 2023
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3B1J
| Crystal structure of Glyceraldehyde-3-Phosphate Dehydrogenase complexed with CP12 in the presence of copper from Synechococcus elongatus | Descriptor: | COPPER (II) ION, CP12, Glyceraldehyde 3-phosphate dehydrogenase (NADP+), ... | Authors: | Matsumura, H, Kai, A, Inoue, T. | Deposit date: | 2011-07-04 | Release date: | 2012-01-11 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Structure Basis for the Regulation of Glyceraldehyde-3-Phosphate Dehydrogenase Activity via the Intrinsically Disordered Protein CP12. Structure, 19, 2011
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2ZHP
| Crystal structure of bleomycin-binding protein from Streptoalloteichus hindustanus complexed with bleomycin derivative | Descriptor: | Bleomycin resistance protein, CHLORIDE ION, COPPER (II) ION, ... | Authors: | Okumura, H, Miyazaki, I, Simizu, S, Osada, H. | Deposit date: | 2008-02-06 | Release date: | 2009-02-17 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Structure-Affinity Relationship Study of Bleomycins and Shble protein Using a Chemical Array To be Published
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3B20
| Crystal structure of Glyceraldehyde-3-Phosphate Dehydrogenase complexed with NADfrom Synechococcus elongatus" | Descriptor: | Glyceraldehyde 3-phosphate dehydrogenase (NADP+), NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION | Authors: | Matsumura, H, Kai, A, Maeda, T, Inoue, T. | Deposit date: | 2011-07-17 | Release date: | 2012-01-11 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.398 Å) | Cite: | Structure Basis for the Regulation of Glyceraldehyde-3-Phosphate Dehydrogenase Activity via the Intrinsically Disordered Protein CP12. Structure, 19, 2011
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3AXM
| Structure of rice Rubisco in complex with 6PG | Descriptor: | 6-PHOSPHOGLUCONIC ACID, MAGNESIUM ION, Ribulose bisphosphate carboxylase large chain, ... | Authors: | Matsumura, H, Mizohata, E, Ishida, H, Kogami, A, Ueno, T, Makino, A, Inoue, T, Yokota, A, Mae, T, Kai, Y. | Deposit date: | 2011-04-11 | Release date: | 2012-04-11 | Last modified: | 2013-06-05 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Crystal structure of rice Rubisco and implications for activation induced by positive effectors NADPH and 6-phosphogluconate J.Mol.Biol., 422, 2012
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3AXK
| Structure of rice Rubisco in complex with NADP(H) | Descriptor: | GLYCEROL, MAGNESIUM ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... | Authors: | Matsumura, H, Mizohata, E, Ishida, H, Kogami, A, Ueno, T, Makino, A, Inoue, T, Yokota, A, Mae, T, Kai, Y. | Deposit date: | 2011-04-11 | Release date: | 2012-04-11 | Last modified: | 2013-06-05 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Crystal structure of rice Rubisco and implications for activation induced by positive effectors NADPH and 6-phosphogluconate J.Mol.Biol., 422, 2012
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