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PDB: 139 results

8JAE
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BU of 8jae by Molmil
Crystal structure of E33A mutant human galectin-10 produced by cell-free protein synthesis in complex with melezitose
Descriptor: Galectin-10, alpha-D-glucopyranose-(1-2)-[alpha-D-glucopyranose-(1-3)]beta-D-fructofuranose
Authors:Kojima, M, Ueno, T, Abe, S, Hirata, K.
Deposit date:2023-05-05
Release date:2024-05-08
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Cell-free protein crystallization for rapid structure determination of multiple substrates
To Be Published
7VIU
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BU of 7viu by Molmil
Crystal structure of Au(200EQ)-apo-R168C/L169C-rHLFr
Descriptor: CADMIUM ION, CHLORIDE ION, Ferritin light chain, ...
Authors:Lu, C, Peng, X, Maity, B, Ito, N, Abe, S, Ueno, T, Lu, D.
Deposit date:2021-09-27
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Design of a gold clustering site in an engineered apo-ferritin cage.
Commun Chem, 5, 2022
5GU1
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BU of 5gu1 by Molmil
Crystal structure of Au(L).CL-apo-E45C/R52C-rHLFr
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, Ferritin light chain, ...
Authors:Maity, B, Abe, S, Ueno, T.
Deposit date:2016-08-24
Release date:2017-03-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Observation of gold sub-nanocluster nucleation within a crystalline protein cage
Nat Commun, 8, 2017
5GU2
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BU of 5gu2 by Molmil
Crystal structure of Au(M).CL-apo-E45C/R52C-rHLFr
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, Ferritin light chain, ...
Authors:Maity, B, Abe, S, Ueno, T.
Deposit date:2016-08-24
Release date:2017-03-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Observation of gold sub-nanocluster nucleation within a crystalline protein cage
Nat Commun, 8, 2017
7E3E
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BU of 7e3e by Molmil
Crystal structure of Trypanosoma brucei cathepsin B R91C/T223C mutant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cysteine peptidase C (CPC), beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Abe, S, Pham, T.T, Negishi, H, Yamashita, K, Hirata, K, Ueno, T.
Deposit date:2021-02-08
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Design of an In-Cell Protein Crystal for the Environmentally Responsive Construction of a Supramolecular Filament.
Angew.Chem.Int.Ed.Engl., 60, 2021
7E3F
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BU of 7e3f by Molmil
Crystal structure of Trypanosoma brucei cathepsin B Y217C/S275C mutant
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cysteine peptidase C (CPC), beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Abe, S, Pham, T.T, Negishi, H, Yamashita, K, Hirata, K, Ueno, T.
Deposit date:2021-02-08
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Design of an In-Cell Protein Crystal for the Environmentally Responsive Construction of a Supramolecular Filament.
Angew.Chem.Int.Ed.Engl., 60, 2021
7E3G
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BU of 7e3g by Molmil
Crystal structure of Trypanosoma brucei cathepsin B R91C/T223C mutant in the living cell
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cysteine peptidase C (CPC), beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Abe, S, Pham, T.T, Negishi, H, Yamashita, K, Hirata, K, Ueno, T.
Deposit date:2021-02-08
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.86 Å)
Cite:Design of an In-Cell Protein Crystal for the Environmentally Responsive Construction of a Supramolecular Filament.
Angew.Chem.Int.Ed.Engl., 60, 2021
6LEE
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BU of 6lee by Molmil
Crystal structure of Cypovirus Polyhedra mutant with deletion of Ala67-Ala104
Descriptor: Polyhedrin
Authors:Abe, S, Kasamatsu, M, Hirata, K, Yamashita, K, Ueno, T.
Deposit date:2019-11-25
Release date:2020-12-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:In-Cell Engineering of Protein Crystals with Nanoporous Structures for Promoting Cascade Reactions
ACS Appl Nano Mater, 4, 2021
7VIQ
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BU of 7viq by Molmil
Crystal structure of Au(50EQ)-apo-R168H/L169C-rHLFr
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, Ferritin light chain, ...
Authors:Lu, C, Peng, X, Maity, B, Ito, N, Abe, S, Ueno, T, Lu, D.
Deposit date:2021-09-27
Release date:2022-06-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Design of a gold clustering site in an engineered apo-ferritin cage.
Commun Chem, 5, 2022
3W6A
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BU of 3w6a by Molmil
Crystal structure of cross-linked tetragonal hen egg white lysozyme soaked wiht 5mM [Ru(benzene)Cl2]2
Descriptor: ACETATE ION, Benzeneruthenium(II) chloride, CHLORIDE ION, ...
Authors:Tabe, H, Abe, S, Hikage, T, Kitagawa, S, Ueno, T.
Deposit date:2013-02-13
Release date:2014-02-19
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Solid Artificial Metalloenzymes: Post-Engineering of Porous Protein Crystals by Organometallic Complexes
To be Published
7EMM
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BU of 7emm by Molmil
Crystal structure of IrCp* immobilized apo-R52H-rHLFr
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
Authors:Taher, M, Maity, B, Nakane, T, Abe, S, Ueno, T, Mazumdar, S.
Deposit date:2021-04-14
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Controlled Uptake of an Iridium Complex inside Engineered apo-Ferritin Nanocages: Study of Structure and Catalysis.
Angew.Chem.Int.Ed.Engl., 61, 2022
7EML
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BU of 7eml by Molmil
Structure of IrCp* immobilized apo-D38H-rHLFr
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
Authors:Taher, M, Maity, B, Nakane, T, Abe, S, Ueno, T, Mazumdar, S.
Deposit date:2021-04-14
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Controlled Uptake of an Iridium Complex inside Engineered apo-Ferritin Nanocages: Study of Structure and Catalysis.
Angew.Chem.Int.Ed.Engl., 61, 2022
5E1U
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BU of 5e1u by Molmil
Crystal structure of IrCp*-apo-Fr
Descriptor: CADMIUM ION, Ferritin light chain, IRIDIUM (III) ION, ...
Authors:Maity, B, Fukumori, K, Abe, S, Ueno, T.
Deposit date:2015-09-30
Release date:2016-04-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Immobilization of two organometallic complexes into a single cage to construct protein-based microcompartments
Chem.Commun.(Camb.), 52, 2016
5E2D
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BU of 5e2d by Molmil
Crystal structure of IrCp*/Pd(allyl)-apo-Fr
Descriptor: CADMIUM ION, Ferritin light chain, IRIDIUM (III) ION, ...
Authors:Maity, B, Fukumori, K, Abe, S, Ueno, T.
Deposit date:2015-10-01
Release date:2016-04-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Immobilization of two organometallic complexes into a single cage to construct protein-based microcompartments
Chem.Commun.(Camb.), 52, 2016
5GU3
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BU of 5gu3 by Molmil
Crystal structure of Au(E).CL-apo-E45C/R52C-rHLFr
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, Ferritin light chain, ...
Authors:Maity, B, Abe, S, Ueno, T.
Deposit date:2016-08-24
Release date:2017-03-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Observation of gold sub-nanocluster nucleation within a crystalline protein cage
Nat Commun, 8, 2017
5GU0
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BU of 5gu0 by Molmil
Crystal structure of Au.CL-apo-E45C/R52C-rHLFr
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, Ferritin light chain, ...
Authors:Maity, B, Abe, S, Ueno, T.
Deposit date:2016-08-24
Release date:2017-03-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Observation of gold sub-nanocluster nucleation within a crystalline protein cage
Nat Commun, 8, 2017
5HQO
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BU of 5hqo by Molmil
Crystal structure of IrCp*/I-Pd(allyl)-apo-rHLFr
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, Ferritin light chain, ...
Authors:Maity, B, Fukumori, K, Abe, S, Ueno, T.
Deposit date:2016-01-21
Release date:2016-04-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Immobilization of two organometallic complexes into a single cage to construct protein-based microcompartments
Chem.Commun.(Camb.), 52, 2016
7VIO
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BU of 7vio by Molmil
Crystal structure of recombinant horse spleen apo-R168H/L169C-Fr
Descriptor: CADMIUM ION, Ferritin light chain, GLYCEROL, ...
Authors:Lu, C, Peng, X, Maity, B, Ito, N, Abe, S, Wu, J, Ueno, T, Lu, D.
Deposit date:2021-09-27
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Design of a gold clustering site in an engineered apo-ferritin cage.
Commun Chem, 5, 2022
7VIT
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BU of 7vit by Molmil
Crystal structure of Au(400EQ)-apo-R168H/L169C-rHLFr
Descriptor: CADMIUM ION, CHLORIDE ION, Ferritin light chain, ...
Authors:Lu, C, Peng, X, Maity, B, Ito, N, Abe, S, Ueno, T, Lu, D.
Deposit date:2021-09-27
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Design of a gold clustering site in an engineered apo-ferritin cage.
Commun Chem, 5, 2022
7VIR
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BU of 7vir by Molmil
Crystal structure of Au(100EQ)-apo-R168H/L169C-rHLFr
Descriptor: CADMIUM ION, Ferritin light chain, GOLD ION, ...
Authors:Lu, C, Peng, X, Maity, B, Ito, N, Abe, S, Ueno, T, Lu, D.
Deposit date:2021-09-27
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Design of a gold clustering site in an engineered apo-ferritin cage.
Commun Chem, 5, 2022
7VIP
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BU of 7vip by Molmil
Crystal structure of Au(10EQ)-apo-R168H/L169C-rHLFr
Descriptor: CADMIUM ION, Ferritin light chain, GLYCEROL, ...
Authors:Lu, C, Peng, X, Maity, B, Ito, N, Abe, S, Ueno, T, Lu, D.
Deposit date:2021-09-27
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Design of a gold clustering site in an engineered apo-ferritin cage.
Commun Chem, 5, 2022
7VIS
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BU of 7vis by Molmil
Crystal structure of Au(200EQ)-apo-R168H/L169C-rHLFr
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
Authors:Lu, C, Peng, X, Maity, B, Ito, N, Abe, S, Ueno, T, Lu, D.
Deposit date:2021-09-27
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Design of a gold clustering site in an engineered apo-ferritin cage.
Commun Chem, 5, 2022
2ZJD
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BU of 2zjd by Molmil
Crystal Structure of LC3-p62 complex
Descriptor: Microtubule-associated proteins 1A/1B light chain 3B precursor, undecameric peptide from Sequestosome-1
Authors:Ichimura, Y, Kumanomidou, T, Sou, Y, Mizushima, T, Ezaki, J, Ueno, T, Kominami, E, Yamane, T, Tanaka, K, Komatsu, M.
Deposit date:2008-03-05
Release date:2008-06-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Structural Basis for Sorting Mechanism of p62 in Selective Autophagy
J.Biol.Chem., 283, 2008
3A92
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BU of 3a92 by Molmil
Crystal structure of hen egg white lysozyme soaked with 10mM RhCl3
Descriptor: CHLORIDE ION, GLYCEROL, Lysozyme C, ...
Authors:Abe, S, Koshiyama, T, Ohki, T, Hikage, T, Watanabe, Y, Ueno, T.
Deposit date:2009-10-15
Release date:2010-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Elucidation of Metal-Ion Accumulation Induced by Hydrogen Bonds on Protein Surfaces by Using Porous Lysozyme Crystals Containing Rh(III) Ions as the Model Surfaces
Chemistry, 16, 2010
3A1M
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BU of 3a1m by Molmil
A fusion protein of a beta helix region of gene product 5 and the foldon region of bacteriophage T4
Descriptor: POTASSIUM ION, chimera of thrombin cleavage site, Tail-associated lysozyme, ...
Authors:Yokoi, N, Suzuki, A, Hikage, T, Koshiyama, T, Terauchi, M, Yutani, K, Kanamaru, S, Arisaka, F, Yamane, T, Watanabe, Y, Ueno, T.
Deposit date:2009-04-11
Release date:2010-04-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Construction of Robust Bio-nanotubes using the Controlled Self-Assembly of Component Proteins of Bacteriophage T4
Small, 6, 2010

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