Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 211 件

1J4P
DownloadVisualize
BU of 1j4p by Molmil
NMR STRUCTURE OF THE FHA1 DOMAIN OF RAD53 IN COMPLEX WITH A RAD9-DERIVED PHOSPHOTHREONINE (AT T155) PEPTIDE
分子名称: DNA REPAIR PROTEIN RAD9, PROTEIN KINASE SPK1
著者Yuan, C, Yongkiettrakul, S, Byeon, I.-J.L, Zhou, S, Tsai, M.-D.
登録日2001-10-22
公開日2001-12-05
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structures of two FHA1-phosphothreonine peptide complexes provide insight into the structural basis of the ligand specificity of FHA1 from yeast Rad53.
J.Mol.Biol., 314, 2001
6LYB
DownloadVisualize
BU of 6lyb by Molmil
PylRS C-terminus domain mutant in complex with 3-Benzothienyl-D-alanine and AMPNP
分子名称: (2R)-2-azanyl-3-(1-benzothiophen-3-yl)propanoic acid, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Weng, J.H, Tsai, M.D, Wang, Y.S.
登録日2020-02-13
公開日2020-07-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.90366471 Å)
主引用文献Probing the Active Site of Deubiquitinase USP30 with Noncanonical Tryptophan Analogues.
Biochemistry, 59, 2020
2M2U
DownloadVisualize
BU of 2m2u by Molmil
Binary complex of African Swine Fever Virus Pol X with MgdGTP
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Repair DNA polymerase X
著者Wu, W, Su, M, Tsai, M.
登録日2013-01-03
公開日2014-04-02
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献How a low-fidelity DNA polymerase chooses non-Watson-Crick from Watson-Crick incorporation.
J.Am.Chem.Soc., 136, 2014
2M2W
DownloadVisualize
BU of 2m2w by Molmil
Ternary complex of ASFV Pol X with DNA and MgdGTP
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(P*GP*GP*CP*GP*AP*AP*GP*CP*CP*GP*GP*GP*TP*GP*CP*GP*AP*AP*GP*CP*AP*CP*(DOC))-3', MAGNESIUM ION, ...
著者Wu, W, Su, M, Tsai, M.
登録日2013-01-03
公開日2014-04-02
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献How a low-fidelity DNA polymerase chooses non-Watson-Crick from Watson-Crick incorporation.
J.Am.Chem.Soc., 136, 2014
6LY7
DownloadVisualize
BU of 6ly7 by Molmil
PylRS C-terminus domain mutant bound with 1-Formyl-L-tryptophan and AMPNP
分子名称: MAGNESIUM ION, N1-FORMYL-TRYPTOPHAN, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Weng, J.H, Tsai, M.D, Wang, Y.S.
登録日2020-02-13
公開日2020-07-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.09447265 Å)
主引用文献Probing the Active Site of Deubiquitinase USP30 with Noncanonical Tryptophan Analogues.
Biochemistry, 59, 2020
2M2T
DownloadVisualize
BU of 2m2t by Molmil
ASFV Pol X structure
分子名称: Repair DNA polymerase X
著者Wu, W, Su, M, Tsai, M.
登録日2013-01-03
公開日2014-04-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献How a low-fidelity DNA polymerase chooses non-Watson-Crick from Watson-Crick incorporation.
J.Am.Chem.Soc., 136, 2014
1K3Q
DownloadVisualize
BU of 1k3q by Molmil
NMR structure of the FHA1 Domain of Rad53 in Complex with a Rad9-derived Phosphothreonine (at T192) Peptide
分子名称: DNA repair protein Rad9, Protein Kinase SPK1
著者Yuan, C, Yongkiettrakul, S, Byeon, I.-J.L, Zhou, S, Tsai, M.-D.
登録日2001-10-03
公開日2001-12-05
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution structures of two FHA1-phosphothreonine peptide complexes provide insight into the structural basis of the ligand specificity of FHA1 from yeast Rad53.
J.Mol.Biol., 314, 2001
7F8T
DownloadVisualize
BU of 7f8t by Molmil
Re-refinement of the 2XRY X-ray structure of archaeal class II CPD photolyase from Methanosarcina mazei
分子名称: Deoxyribodipyrimidine photolyase, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
著者Maestre-Reyna, M, Yang, C.-H, Huang, W.C, Nango, E, Gusti-Ngurah-Putu, E.-P, Franz-Badur, S, Wu, W.-J, Wu, H.-Y, Wang, P.-H, Liao, J.-H, Lee, C.-C, Huang, K.-F, Chang, Y.-K, Weng, J.-H, Sugahara, M, Owada, S, Joti, Y, Tanaka, R, Tono, K, Kiontke, S, Yamamoto, J, Iwata, S, Essen, L.-O, Bessho, Y, Tsai, M.-D.
登録日2021-07-02
公開日2022-03-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Serial crystallography captures dynamic control of sequential electron and proton transfer events in a flavoenzyme.
Nat.Chem., 14, 2022
1K3N
DownloadVisualize
BU of 1k3n by Molmil
NMR Structure of the FHA1 Domain of Rad53 in Complex with a Rad9-derived Phosphothreonine (at T155) Peptide
分子名称: DNA repair protein Rad9, Protein Kinase SPK1
著者Yuan, C, Yongkiettrakul, S, Byeon, I.-J.L, Zhou, S, Tsai, M.-D.
登録日2001-10-03
公開日2001-12-05
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution structures of two FHA1-phosphothreonine peptide complexes provide insight into the structural basis of the ligand specificity of FHA1 from yeast Rad53.
J.Mol.Biol., 314, 2001
3H42
DownloadVisualize
BU of 3h42 by Molmil
Crystal structure of PCSK9 in complex with Fab from LDLR competitive antibody
分子名称: Fab from LDLR competitive antibody: Heavy chain, Fab from LDLR competitive antibody: Light chain, Proprotein convertase subtilisin/kexin type 9, ...
著者Piper, D.E, Walker, N.P.C, Romanow, W.G, Thibault, S.T, Tsai, M.M, Yang, E.
登録日2009-04-17
公開日2009-05-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献From the Cover: A proprotein convertase subtilisin/kexin type 9 neutralizing antibody reduces serum cholesterol in mice and nonhuman primates.
Proc.Natl.Acad.Sci.USA, 106, 2009
6ISF
DownloadVisualize
BU of 6isf by Molmil
Structure of 9N-I DNA polymerase incorporation with dT in the active site
分子名称: CALCIUM ION, DNA (5'-D(*AP*CP*AP*GP*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3'), DNA (5'-D(P*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*CP*CP*T)-3'), ...
著者Linwu, S.W, Maestre-Reyna, M, Tsai, M.D, Tu, Y.H, Chang, W.H.
登録日2018-11-16
公開日2019-08-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Thermococcus sp. 9°N DNA polymerase exhibits 3'-esterase activity that can be harnessed for DNA sequencing.
Commun Biol, 2, 2019
2AFF
DownloadVisualize
BU of 2aff by Molmil
The solution structure of the Ki67FHA/hNIFK(226-269)3P complex
分子名称: Antigen KI-67, MKI67 FHA domain interacting nucleolar phosphoprotein
著者Byeon, I.-J.L, Li, H, Song, H, Gronenborn, A.M, Tsai, M.D.
登録日2005-07-25
公開日2005-10-25
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Sequential phosphorylation and multisite interactions characterize specific target recognition by the FHA domain of Ki67.
Nat.Struct.Mol.Biol., 12, 2005
2M2V
DownloadVisualize
BU of 2m2v by Molmil
African Swine Fever Virus Pol X in the ternary complex with MgdGTP and DNA
分子名称: Repair DNA polymerase X
著者Wu, W, Su, M, Tsai, M.
登録日2013-01-03
公開日2014-04-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献How a low-fidelity DNA polymerase chooses non-Watson-Crick from Watson-Crick incorporation.
J.Am.Chem.Soc., 136, 2014
6ISI
DownloadVisualize
BU of 6isi by Molmil
Structure of 9N-I DNA polymerase incorporation with 3'-CL in the active site
分子名称: 3-[2-[2-(2-azanylethoxy)ethoxy]ethoxy]propanoic acid, CALCIUM ION, DNA (5'-D(P*AP*CP*GP*GP*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3'), ...
著者Linwu, S.W, Maestre-Reyna, M, Tsai, M.D, Tu, Y.H, Chang, W.H.
登録日2018-11-16
公開日2019-08-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Thermococcus sp. 9°N DNA polymerase exhibits 3'-esterase activity that can be harnessed for DNA sequencing.
Commun Biol, 2, 2019
6ISH
DownloadVisualize
BU of 6ish by Molmil
Structure of 9N-I DNA polymerase incorporation with 3'-AL in the active site
分子名称: CALCIUM ION, DNA (5'-D(*AP*CP*TP*GP*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*C)-3'), DNA (5'-D(P*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*CP*CP*(DAL))-3'), ...
著者Linwu, S.W, Maestre-Reyna, M, Tsai, M.D, Tu, Y.H, Chang, W.H.
登録日2018-11-16
公開日2019-08-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Thermococcus sp. 9°N DNA polymerase exhibits 3'-esterase activity that can be harnessed for DNA sequencing.
Commun Biol, 2, 2019
1HUO
DownloadVisualize
BU of 1huo by Molmil
CRYSTAL STRUCTURE OF DNA POLYMERASE BETA COMPLEXED WITH DNA AND CR-TMPPCP
分子名称: 5'-D(*AP*AP*TP*AP*GP*GP*CP*GP*TP*CP*G)-3', 5'-D(P*CP*GP*AP*CP*GP*CP*C)-3', CHROMIUM ION, ...
著者Arndt, J.W, Gong, W, Zhong, X, Showalter, A.K, Liu, J, Lin, Z, Paxson, C, Tsai, M.-D, Chan, M.K.
登録日2001-01-04
公開日2001-04-23
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Insight into the catalytic mechanism of DNA polymerase beta: structures of intermediate complexes.
Biochemistry, 40, 2001
1C74
DownloadVisualize
BU of 1c74 by Molmil
Structure of the double mutant (K53,56M) of phospholipase A2
分子名称: CALCIUM ION, PHOSPHOLIPASE A2
著者Sekar, K, Tsai, M.D, Jain, M.K, Ramakumar, S.
登録日2000-01-22
公開日2000-07-22
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis of the anionic interface preference and k*cat activation of pancreatic phospholipase A2.
Biochemistry, 39, 2000
1HUZ
DownloadVisualize
BU of 1huz by Molmil
CRYSTAL STRUCTURE OF DNA POLYMERASE COMPLEXED WITH DNA AND CR-PCP
分子名称: 5'-D(*AP*AP*TP*AP*GP*GP*CP*GP*TP*CP*G)-3', 5'-D(P*CP*GP*AP*CP*GP*CP*CP*T)-3', CHROMIUM ION, ...
著者Arndt, J.W, Gong, W, Zhong, X, Showalter, A.K, Liu, J, Lin, Z, Paxson, C, Tsai, M.-D, Chan, M.K.
登録日2001-01-04
公開日2001-04-23
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Insight into the catalytic mechanism of DNA polymerase beta: structures of intermediate complexes.
Biochemistry, 40, 2001
6ISG
DownloadVisualize
BU of 6isg by Molmil
Structure of 9N-I DNA polymerase incorporation with dG in the active site
分子名称: CALCIUM ION, DNA (5'-D(*GP*AP*CP*GP*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*G)-3'), DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*CP*CP*G)-3'), ...
著者Linwu, S.W, Maestre-Reyna, M, Tsai, M.D, Tu, Y.H, Chang, W.H.
登録日2018-11-16
公開日2019-08-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.401 Å)
主引用文献Thermococcus sp. 9°N DNA polymerase exhibits 3'-esterase activity that can be harnessed for DNA sequencing.
Commun Biol, 2, 2019
1O2E
DownloadVisualize
BU of 1o2e by Molmil
Structure of the triple mutant (K53,56,120M) + Anisic acid complex of phospholipase A2
分子名称: 4-METHOXYBENZOIC ACID, CALCIUM ION, Phospholipase A2
著者Sekar, K, Velmurugan, D, Tsai, M.D.
登録日2003-03-05
公開日2003-09-09
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structures of the free and anisic acid bound triple mutant of phospholipase A2.
J.Mol.Biol., 333, 2003
1DMZ
DownloadVisualize
BU of 1dmz by Molmil
A REFINED NMR STRUCTURE OF A NEW PHOPHOPEPTIDE-BINDING DOMAIN CONTAINING THE FHA2 OF RAD53
分子名称: PROTEIN (PROTEIN KINASE SPK1)
著者Byeon, I.-J.L, Liao, H, Tsai, M.-D.
登録日1999-12-15
公開日2000-01-06
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure and Function of a New Phosphopeptide-Binding Domain Containing the Fha2 of Rad53
J.Mol.Biol., 294, 1999
8KE2
DownloadVisualize
BU of 8ke2 by Molmil
PylRS C-terminus domain mutant bound with L-3-trifluoromethylphenylalanine and AMPNP
分子名称: (2S)-2-azanyl-3-[3-(trifluoromethyl)phenyl]propanoic acid, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Weng, J.H, Tsai, M.D, Wang, Y.S.
登録日2023-08-11
公開日2023-11-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.19639969 Å)
主引用文献Rational design of the genetic code expansion toolkit for in vivo encoding of D-amino acids.
Front Genet, 14, 2023
8KE3
DownloadVisualize
BU of 8ke3 by Molmil
PylRS C-terminus domain mutant bound with D-3-trifluoromethylphenylalanine and AMPNP
分子名称: (2R)-2-azanyl-3-[3-(trifluoromethyl)phenyl]propanoic acid, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Weng, J.H, Tsai, M.D, Wang, Y.S.
登録日2023-08-11
公開日2023-11-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.89980984 Å)
主引用文献Rational design of the genetic code expansion toolkit for in vivo encoding of D-amino acids.
Front Genet, 14, 2023
8KE5
DownloadVisualize
BU of 8ke5 by Molmil
PylRS C-terminus domain mutant bound with D-3-chlorophenylalanine and AMPNP
分子名称: (2R)-2-azanyl-3-(3-chlorophenyl)propanoic acid, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Weng, J.H, Tsai, M.D, Wang, Y.S.
登録日2023-08-11
公開日2023-11-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.900073 Å)
主引用文献Rational design of the genetic code expansion toolkit for in vivo encoding of D-amino acids.
Front Genet, 14, 2023
8KE6
DownloadVisualize
BU of 8ke6 by Molmil
PylRS C-terminus domain mutant bound with L-3-chlorophenylalanine and AMPNP
分子名称: 3-CHLORO-L-PHENYLALANINE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Weng, J.H, Tsai, M.D, Wang, Y.S.
登録日2023-08-11
公開日2023-11-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.89570856 Å)
主引用文献Rational design of the genetic code expansion toolkit for in vivo encoding of D-amino acids.
Front Genet, 14, 2023

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon