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PDB: 54 件

1YGH
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HAT DOMAIN OF GCN5 FROM SACCHAROMYCES CEREVISIAE
分子名称: GLYCEROL, PROTEIN (TRANSCRIPTIONAL ACTIVATOR GCN5)
著者Trievel, R.C, Rojas, J.R, Sterner, D.E, Venkataramani, R, Wang, L, Zhou, J, Allis, C.D, Berger, S.L, Marmorstein, R.
登録日1999-05-27
公開日1999-08-02
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure and mechanism of histone acetylation of the yeast GCN5 transcriptional coactivator.
Proc.Natl.Acad.Sci.USA, 96, 1999
1MLV
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Structure and Catalytic Mechanism of a SET Domain Protein Methyltransferase
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Ribulose-1,5 biphosphate carboxylase/oxygenase large subunit N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Trievel, R.C, Beach, B.M, Dirk, L.M.A, Houtz, R.L, Hurley, J.H.
登録日2002-08-30
公開日2002-10-30
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure and catalytic mechanism of a SET domain protein methyltransferase.
Cell(Cambridge,Mass.), 111, 2002
1OZV
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Crystal structure of the SET domain of LSMT bound to Lysine and AdoHcy
分子名称: LYSINE, Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast, ...
著者Trievel, R.C, Flynn, E.M, Houtz, R.L, Hurley, J.H.
登録日2003-04-09
公開日2003-07-01
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Mechanism of multiple lysine methylation by the SET domain enzyme Rubisco LSMT
Nat.Struct.Biol., 10, 2003
1P0Y
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Crystal structure of the SET domain of LSMT bound to MeLysine and AdoHcy
分子名称: N-METHYL-LYSINE, Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast, ...
著者Trievel, R.C, Flynn, E.M, Houtz, R.L, Hurley, J.H.
登録日2003-04-11
公開日2003-07-01
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Mechanism of multiple lysine methylation by the SET domain enzyme Rubisco LSMT
Nat.Struct.Biol., 10, 2003
5WNW
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Chaperone Spy bound to Im7 6-45 ensemble
分子名称: CHLORIDE ION, Colicin-E7 immunity protein, IMIDAZOLE, ...
著者Horowitz, S, Salmon, L, Koldewey, P, Ahlstrom, L.S, Martin, R, Xu, Q, Afonine, P.V, Trievel, R.C, Brooks, C.L, Bardwell, J.C.A.
登録日2017-08-01
公開日2017-08-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Visualizing chaperone-assisted protein folding.
Nat. Struct. Mol. Biol., 23, 2016
1QST
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CRYSTAL STRUCTURE OF TETRAHYMENA GCN5
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, TGCN5 HISTONE ACETYL TRANSFERASE
著者Rojas, J.R, Trievel, R.C, Zhou, J, Mo, Y, Li, X, Berger, S.L, David Allis, C, Marmorstein, R.
登録日1999-06-23
公開日1999-09-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of Tetrahymena GCN5 bound to coenzyme A and a histone H3 peptide.
Nature, 401, 1999
1QSN
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CRYSTAL STRUCTURE OF TETRAHYMENA GCN5 WITH BOUND COENZYME A AND HISTONE H3 PEPTIDE
分子名称: COENZYME A, HISTONE H3, TGCN5 HISTONE ACETYL TRANSFERASE
著者Rojas, J.R, Trievel, R.C, Zhou, J, Mo, Y, Li, X, Berger, S.L, David Allis, C, Marmorstein, R.
登録日1999-06-22
公開日1999-09-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of Tetrahymena GCN5 bound to coenzyme A and a histone H3 peptide.
Nature, 401, 1999
5EG2
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SET7/9 N265A in complex with AdoHcy and TAF10 peptide
分子名称: Histone-lysine N-methyltransferase SETD7, S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, ...
著者Kroner, G.M, Fick, R.J, Trievel, R.C.
登録日2015-10-26
公開日2016-01-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Sulfur-Oxygen Chalcogen Bonding Mediates AdoMet Recognition in the Lysine Methyltransferase SET7/9.
Acs Chem.Biol., 11, 2016
2F69
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Ternary complex of SET7/9 bound to AdoHcy and a TAF10 peptide
分子名称: Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Couture, J.-F, Collazo, E, Hauk, G, Trievel, R.C.
登録日2005-11-28
公開日2006-01-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural basis for the methylation site specificity of SET7/9
Nat.Struct.Mol.Biol., 13, 2006
4GJZ
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JMJD5 in complex with 2-oxoglutarate
分子名称: 2-OXOGLUTARIC ACID, BETA-MERCAPTOETHANOL, COBALT (II) ION, ...
著者Del Rizzo, P.A, Trievel, R.C.
登録日2012-08-10
公開日2012-09-05
最終更新日2012-11-14
実験手法X-RAY DIFFRACTION (1.0481 Å)
主引用文献Crystal Structure and Functional Analysis of JMJD5 Indicate an Alternate Specificity and Function.
Mol.Cell.Biol., 32, 2012
4GJY
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JMJD5 in complex with N-Oxalylglycine
分子名称: COBALT (II) ION, JmjC domain-containing protein 5, N-OXALYLGLYCINE
著者Del Rizzo, P.A, Trievel, R.C.
登録日2012-08-10
公開日2012-09-05
最終更新日2012-11-14
実験手法X-RAY DIFFRACTION (1.2492 Å)
主引用文献Crystal Structure and Functional Analysis of JMJD5 Indicate an Alternate Specificity and Function.
Mol.Cell.Biol., 32, 2012
3TY3
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Crystal structure of homoisocitrate dehydrogenase from Schizosaccharomyces pombe bound to glycyl-glycyl-glycine
分子名称: GLYCEROL, Probable homoisocitrate dehydrogenase, glycylglycylglycine
著者Bulfer, S.L, Hendershot, J.M, Trievel, R.C.
登録日2011-09-23
公開日2011-11-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of homoisocitrate dehydrogenase from Schizosaccharomyces pombe.
Proteins, 80, 2012
3TY4
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Crystal structure of homoisocitrate dehydrogenase from Schizosaccharomyces pombe
分子名称: GLYCEROL, Probable homoisocitrate dehydrogenase
著者Bulfer, S.L, Hendershot, J.M, Trievel, R.C.
登録日2011-09-23
公開日2011-11-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure of homoisocitrate dehydrogenase from Schizosaccharomyces pombe.
Proteins, 80, 2012
6M81
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Crystal structure of TylM1 Y14F bound to SAH and dTDP-phenol
分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phenoxy)phosphoryl]oxy}phosphoryl]thymidine, S-ADENOSYL-L-HOMOCYSTEINE, dTDP-3-amino-3,6-dideoxy-alpha-D-glucopyranose N,N-dimethyltransferase
著者Fick, R.J, McDole, B.G, Trievel, R.C.
登録日2018-08-21
公開日2019-03-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.782 Å)
主引用文献Structural and Functional Characterization of Sulfonium Carbon-Oxygen Hydrogen Bonding in the Deoxyamino Sugar Methyltransferase TylM1.
Biochemistry, 58, 2019
6M83
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Crystal structure of TylM1 S120A bound to SAH and dTDP-phenol
分子名称: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phenoxy)phosphoryl]oxy}phosphoryl]thymidine, CHLORIDE ION, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Fick, R.J, McDole, B.G, Trievel, R.C.
登録日2018-08-21
公開日2019-03-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.3685 Å)
主引用文献Structural and Functional Characterization of Sulfonium Carbon-Oxygen Hydrogen Bonding in the Deoxyamino Sugar Methyltransferase TylM1.
Biochemistry, 58, 2019
6M82
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Crystal structure of TylM1 Y14paF bound to SAH and dTDP-phenol
分子名称: 1,2-ETHANEDIOL, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phenoxy)phosphoryl]oxy}phosphoryl]thymidine, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Fick, R.J, McDole, B.G, Trievel, R.C.
登録日2018-08-21
公開日2019-03-13
最終更新日2019-11-27
実験手法X-RAY DIFFRACTION (1.3971 Å)
主引用文献Structural and Functional Characterization of Sulfonium Carbon-Oxygen Hydrogen Bonding in the Deoxyamino Sugar Methyltransferase TylM1.
Biochemistry, 58, 2019
6BDY
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Crystal Structure of the MetH Reactivation Domain bound to Sinefungin
分子名称: Methionine synthase, SINEFUNGIN
著者Fick, R.J, Vander Lee, L.P, Trievel, R.C.
登録日2017-10-24
公開日2018-05-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.512 Å)
主引用文献Water-Mediated Carbon-Oxygen Hydrogen Bonding Facilitates S-Adenosylmethionine Recognition in the Reactivation Domain of Cobalamin-Dependent Methionine Synthase.
Biochemistry, 57, 2018
6BM5
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Crystal Structure of the MetH Reactivation Domain bound to AdoMet
分子名称: Methionine synthase, S-ADENOSYLMETHIONINE
著者Fick, R.J, Vander Lee, L.P, Trievel, R.C.
登録日2017-11-13
公開日2018-05-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Water-Mediated Carbon-Oxygen Hydrogen Bonding Facilitates S-Adenosylmethionine Recognition in the Reactivation Domain of Cobalamin-Dependent Methionine Synthase.
Biochemistry, 57, 2018
6BM6
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Crystal Structure of the MetH Reactivation Domain bound to AdoHcy
分子名称: Methionine synthase, S-ADENOSYL-L-HOMOCYSTEINE
著者Fick, R.J, Vander Lee, L.P, Trievel, R.C.
登録日2017-11-13
公開日2018-05-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.504 Å)
主引用文献Water-Mediated Carbon-Oxygen Hydrogen Bonding Facilitates S-Adenosylmethionine Recognition in the Reactivation Domain of Cobalamin-Dependent Methionine Synthase.
Biochemistry, 57, 2018
1ZKK
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Crystal structure of hSET8 in ternary complex with H4 peptide (16-24) and AdoHcy
分子名称: Histone-lysine N-methyltransferase, H4 lysine-20 specific, Peptide corresponding to residues 15-24 of histone H4, ...
著者Couture, J.-F, Collazo, E, Brunzelle, J.S, Trievel, R.C.
登録日2005-05-03
公開日2005-06-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural and functional analysis of SET8, a histone H4 Lys-20 methyltransferase
Genes Dev., 19, 2005
2Q8C
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Crystal structure of JMJD2A in ternary complex with an histone H3K9me3 peptide and 2-oxoglutarate
分子名称: 2-OXOGLUTARIC ACID, HISTONE 3 PEPTIDE, JmjC domain-containing histone demethylation protein 3A, ...
著者Couture, J.-F, Collazo, E, Ortiz-Tello, P, Brunzelle, J.S, Trievel, R.C.
登録日2007-06-10
公開日2007-07-03
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.047 Å)
主引用文献Specificity and mechanism of JMJD2A, a trimethyllysine-specific histone demethylase.
Nat.Struct.Mol.Biol., 14, 2007
2Q8D
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Crystal structure of JMJ2D2A in ternary complex with histone H3-K36me2 and succinate
分子名称: HISTONE 3 peptide, JmjC domain-containing histone demethylation protein 3A, NICKEL (II) ION, ...
著者Couture, J.-F, Collazo, E, Ortiz-Tello, P, Brunzelle, J.S, Trievel, R.C.
登録日2007-06-10
公開日2007-07-03
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Specificity and mechanism of JMJD2A, a trimethyllysine-specific histone demethylase.
Nat.Struct.Mol.Biol., 14, 2007
2Q8E
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Specificity and Mechanism of JMJD2A, a Trimethyllysine-Specific Histone Demethylase
分子名称: JmjC domain-containing histone demethylation protein 3A, N-OXALYLGLYCINE, NICKEL (II) ION, ...
著者Couture, J.-F, Collazo, E, Ortiz-Tello, P, Brunzelle, J.S, Trievel, R.C.
登録日2007-06-10
公開日2007-07-03
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Specificity and mechanism of JMJD2A, a trimethyllysine-specific histone demethylase.
Nat.Struct.Mol.Biol., 14, 2007
3M55
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SET7/9 Y305F in complex with TAF10-K189me1 peptide and AdoHcy
分子名称: Histone-lysine N-methyltransferase SETD7, S-ADENOSYL-L-HOMOCYSTEINE, TAF10 peptide
著者Del Rizzo, P.A, Couture, J.-F, Roiko, M.S, Strunk, B.S, Brunzelle, J.S, Dirk, L.M, Houtz, R.L, Trievel, R.C.
登録日2010-03-12
公開日2010-07-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献SET7/9 catalytic mutants reveal the role of active site water molecules in lysine multiple methylation.
J.Biol.Chem., 285, 2010
3M53
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SET7/9 in complex with TAF10 peptide and AdoHcy
分子名称: Histone-lysine N-methyltransferase SETD7, S-ADENOSYL-L-HOMOCYSTEINE, TAF10 peptide
著者Del Rizzo, P.A, Couture, J.-F, Roiko, M.S, Strunk, B.S, Brunzelle, J.S, Dirk, L.M, Houtz, R.L, Trievel, R.C.
登録日2010-03-12
公開日2010-07-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献SET7/9 catalytic mutants reveal the role of active site water molecules in lysine multiple methylation.
J.Biol.Chem., 285, 2010

 

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