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PDB: 53 results

7P8D
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Crystal structure of the Receiver domain of A. thaliana cytokinin receptor AtCRE1 in complex with Mg2+
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, MAGNESIUM ION, ...
Authors:Tran, L.H, Urbanowicz, A, Jasinski, M, Jaskolski, M, Ruszkowski, M.
Deposit date:2021-07-21
Release date:2021-10-20
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:3D Domain Swapping Dimerization of the Receiver Domain of Cytokinin Receptor CRE1 From Arabidopsis thaliana and Medicago truncatula .
Front Plant Sci, 12, 2021
7P8E
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Crystal structure of the Receiver domain of M. truncatula cytokinin receptor MtCRE1
Descriptor: CALCIUM ION, Receiver domain of histidine kinase
Authors:Tran, L.H, Urbanowicz, A, Jasinski, M, Jaskolski, M, Ruszkowski, M.
Deposit date:2021-07-21
Release date:2021-10-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:3D Domain Swapping Dimerization of the Receiver Domain of Cytokinin Receptor CRE1 From Arabidopsis thaliana and Medicago truncatula .
Front Plant Sci, 12, 2021
7P8C
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BU of 7p8c by Molmil
Crystal structure of the Receiver domain of A. thaliana cytokinin receptor AtCRE1 in complex with K+
Descriptor: POTASSIUM ION, Receiver domain of histidine kinase 4
Authors:Tran, L.H, Urbanowicz, A, Jasinski, M, Jaskolski, M, Ruszkowski, M.
Deposit date:2021-07-21
Release date:2021-10-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:3D Domain Swapping Dimerization of the Receiver Domain of Cytokinin Receptor CRE1 From Arabidopsis thaliana and Medicago truncatula .
Front Plant Sci, 12, 2021
8AQL
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BU of 8aql by Molmil
High-resolution crystal structure of human SHMT2
Descriptor: 1,2-ETHANEDIOL, N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE], Serine hydroxymethyltransferase, ...
Authors:Tran, L.H, Ruszkowski, M.
Deposit date:2022-08-12
Release date:2022-10-05
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:High-resolution crystal structure of human SHMT2
To Be Published
8DFU
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BU of 8dfu by Molmil
Cryo-EM structure of conjugation pili from Aeropyrum pernix
Descriptor: (2S)-3-{[(3R,7S,11S,15S)-3,7,11,15,19-pentamethylicosyl]oxy}-2-{[(2R,6S,10S,14R)-2,6,10,14,18-pentamethylnonadecyl]oxy}propyl dihydrogen phosphate, Pilin protein
Authors:Beltran, L.C, Egelman, E.H.
Deposit date:2022-06-22
Release date:2023-03-22
Last modified:2024-09-25
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Archaeal DNA-import apparatus is homologous to bacterial conjugation machinery.
Nat Commun, 14, 2023
8EXH
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BU of 8exh by Molmil
Agrobacterium tumefaciens Tpilus
Descriptor: (14S,17R)-20-amino-17-hydroxy-11,17-dioxo-12,16,18-trioxa-17lambda~5~-phosphaicosan-14-yl tetradecanoate, Protein virB2
Authors:Beltran, L.C, Egelman, E.H.
Deposit date:2022-10-25
Release date:2023-03-22
Last modified:2024-09-25
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Archaeal DNA-import apparatus is homologous to bacterial conjugation machinery
Nat Commun, 14, 2023
7SZZ
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BU of 7szz by Molmil
Structure of the smaller diameter PSMalpha3 nanotubes
Descriptor: Phenol-soluble modulin PSM-alpha-3
Authors:Beltran, L.C, Kreutzberger, M.A, Wang, S, Egelman, E.H, Conticello, V.P.
Deposit date:2021-11-29
Release date:2022-05-18
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Phenol-soluble modulins PSM alpha 3 and PSM beta 2 form nanotubes that are cross-alpha amyloids.
Proc.Natl.Acad.Sci.USA, 119, 2022
7SZI
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BU of 7szi by Molmil
Cryo-EM structure of OmpK36-TraN mating pair stabilization proteins from carbapenem-resistant Klebsiella pneumoniae
Descriptor: OmpK36, TraN
Authors:Beltran, L.C, Seddon, C, Beis, K, Frankel, G, Egelman, E.H.
Deposit date:2021-11-27
Release date:2022-06-08
Last modified:2022-07-13
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Mating pair stabilization mediates bacterial conjugation species specificity.
Nat Microbiol, 7, 2022
8DFT
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BU of 8dft by Molmil
Cryo-EM structure of conjugative pili from Pyrobaculum calidifontis
Descriptor: Pilin protein, [(2~{S},7~{S},11~{S},15~{S},19~{R},22~{R},26~{S},30~{R},34~{R},38~{S},43~{S},47~{S},51~{S},55~{R},58~{R},62~{S},66~{R},70~{R})-38-(hydroxymethyl)-7,11,15,19,22,26,30,34,43,47,51,55,58,62,66,70-hexadecamethyl-1,4,37,40-tetraoxacyclodoheptacont-2-yl]methanol
Authors:Beltran, L.C, Egelman, E.H.
Deposit date:2022-06-22
Release date:2023-03-22
Last modified:2024-09-25
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Archaeal DNA-import apparatus is homologous to bacterial conjugation machinery.
Nat Commun, 14, 2023
1RQF
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BU of 1rqf by Molmil
Structure of CK2 beta subunit crystallized in the presence of a p21WAF1 peptide
Descriptor: Casein kinase II beta chain, Disordered segment of Cyclin-dependent kinase inhibitor 1, UNKNOWN, ...
Authors:Bertrand, L, Sayed, M.F, Pei, X.-Y, Parisini, E, Dhanaraj, V, Bolanos-Garcia, V.M, Allende, J.E, Blundell, T.L.
Deposit date:2003-12-05
Release date:2004-10-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structure of the regulatory subunit of CK2 in the presence of a p21WAF1 peptide demonstrates flexibility of the acidic loop.
Acta Crystallogr.,Sect.D, 60, 2004
7EVI
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Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 79% GTP, 21% GDP, Na+, Mg2+
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Robinson, R.C, Akil, C, Tran, L.T.
Deposit date:2021-05-21
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure and dynamics of Odinarchaeota tubulin and the implications for eukaryotic microtubule evolution.
Sci Adv, 8, 2022
7EVH
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BU of 7evh by Molmil
Odinarchaeota tubulin H393D mutant, in a psuedo protofilament arrangement, bound to 59% GDP, 41% phosphate
Descriptor: GUANOSINE-5'-DIPHOSPHATE, PHOSPHATE ION, Tubulin-like protein
Authors:Robinson, R.C, Akil, C, Tran, L.T.
Deposit date:2021-05-21
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure and dynamics of Odinarchaeota tubulin and the implications for eukaryotic microtubule evolution.
Sci Adv, 8, 2022
7F1A
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BU of 7f1a by Molmil
Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound 78% GTP/22% GDP 1 K+, 1 Mg2+
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Robinson, R.C, Akil, C, Tran, L.T.
Deposit date:2021-06-08
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and dynamics of Odinarchaeota tubulin and the implications for eukaryotic microtubule evolution.
Sci Adv, 8, 2022
7EVG
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BU of 7evg by Molmil
Apo Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a psuedo-protofilament arrangement
Descriptor: PHOSPHATE ION, Tubulin-like protein
Authors:Robinson, R.C, Akil, C, Tran, L.T.
Deposit date:2021-05-21
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Structure and dynamics of Odinarchaeota tubulin and the implications for eukaryotic microtubule evolution.
Sci Adv, 8, 2022
7EVE
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BU of 7eve by Molmil
Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 100% GDP and 2 Na+
Descriptor: GUANOSINE-5'-DIPHOSPHATE, SODIUM ION, Tubulin-like protein
Authors:Robinson, R.C, Akil, C, Tran, L.T.
Deposit date:2021-05-21
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and dynamics of Odinarchaeota tubulin and the implications for eukaryotic microtubule evolution.
Sci Adv, 8, 2022
7EVC
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BU of 7evc by Molmil
Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 60% GTP/40% GDP and 2 Na+
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, SODIUM ION, ...
Authors:Robinson, R.C, Akil, C, Tran, L.T.
Deposit date:2021-05-21
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structure and dynamics of Odinarchaeota tubulin and the implications for eukaryotic microtubule evolution.
Sci Adv, 8, 2022
7EVL
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BU of 7evl by Molmil
Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 64% GTP/36% GDP and 2 Na+ in a small unit cell
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, SODIUM ION, ...
Authors:Robinson, R.C, Akil, C, Tran, L.T.
Deposit date:2021-05-21
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure and dynamics of Odinarchaeota tubulin and the implications for eukaryotic microtubule evolution.
Sci Adv, 8, 2022
7EVD
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BU of 7evd by Molmil
Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 53% GTP/47% and 2 Na+
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, SODIUM ION, ...
Authors:Robinson, R.C, Akil, C, Tran, L.T.
Deposit date:2021-05-21
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure and dynamics of Odinarchaeota tubulin and the implications for eukaryotic microtubule evolution.
Sci Adv, 8, 2022
7EVK
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BU of 7evk by Molmil
Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 78% GTP, 22% GDP, Na+
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, SODIUM ION, ...
Authors:Robinson, R.C, Akil, C, Tran, L.T.
Deposit date:2021-05-21
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure and dynamics of Odinarchaeota tubulin and the implications for eukaryotic microtubule evolution.
Sci Adv, 8, 2022
7F1B
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BU of 7f1b by Molmil
Odinarchaeota tubulin H393D mutant, in a pseudo protofilament arrangement, after GTP hydrolysis and phosphate release
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Tubulin-like protein
Authors:Robinson, R.C, Akil, C, Tran, L.T.
Deposit date:2021-06-08
Release date:2022-03-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and dynamics of Odinarchaeota tubulin and the implications for eukaryotic microtubule evolution.
Sci Adv, 8, 2022
7F8M
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BU of 7f8m by Molmil
Roadblock from Thorarchaeota SMTZ1-45
Descriptor: Robl_LC7 domain-containing protein
Authors:Robinson, R.C, Tran, L.T.
Deposit date:2021-07-02
Release date:2022-07-13
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Roadblock from Thorarchaeota SMTZ1-45
To Be Published
7EZE
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BU of 7eze by Molmil
Thorarchaeota Rab GTP-gamma-S/Mg2+ (soak)
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, Thorarchaeota Rab
Authors:Robinson, R.C, Tran, L.T.
Deposit date:2021-06-01
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of Thor-Rab
To Be Published
7EZB
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BU of 7ezb by Molmil
Thorarchaeota Rab bound to GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Thorarchaeota Rab
Authors:Robinson, R.C, Tran, L.T.
Deposit date:2021-06-01
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of Thor-Rab
To Be Published
7EZD
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BU of 7ezd by Molmil
Thorarchaeota Rab co-crystallized with GTP gamma-S
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, Chains: A,B, GUANOSINE-5'-DIPHOSPHATE
Authors:Robinson, R.C, Tran, L.T.
Deposit date:2021-06-01
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structure of Thor-Rab
To Be Published
8QI7
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BU of 8qi7 by Molmil
Cryo-EM Structure of Human Serine Hydroxymethyltransferase, isoform 2 (SHMT2)
Descriptor: Serine hydroxymethyltransferase, mitochondrial
Authors:Rutkiewicz, M, Tran, L.H, Ruszkowski, M.
Deposit date:2023-09-11
Release date:2023-09-20
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:New Structural Models of SHMT2
To Be Published

 

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