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PDB: 61 results

1B96
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BU of 1b96 by Molmil
ANALYSIS OF A MUTATIONAL HOT-SPOT IN THE ECORV RESTRICTION ENDONUCLEASE: A CATALYTIC ROLE FOR A MAIN CHAIN CARBONYL GROUP
Descriptor: DNA (5'-D(*AP*AP*AP*GP*AP*TP*AP*TP*CP*TP*T)-3'), RESTRICTION ENDONUCLEASE ECORV
Authors:Thomas, M.P, Halford, S.E, Brady, R.L.
Deposit date:1999-02-19
Release date:1999-02-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural analysis of a mutational hot-spot in the EcoRV restriction endonuclease: a catalytic role for a main chain carbonyl group.
Nucleic Acids Res., 27, 1999
1B95
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BU of 1b95 by Molmil
ANALYSIS OF A MUTATIONAL HOT-SPOT IN THE ECORV RESTRICTION ENDONUCLEASE: A CATALYTIC ROLE FOR A MAIN CHAIN CARBONYL GROUP
Descriptor: DNA (5'-D(*AP*AP*AP*GP*AP*TP*AP*TP*CP*TP*T)-3'), RESTRICTION ENDONUCLEASE ECORV
Authors:Thomas, M.P, Halford, S.E, Brady, R.L.
Deposit date:1999-02-19
Release date:1999-02-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural analysis of a mutational hot-spot in the EcoRV restriction endonuclease: a catalytic role for a main chain carbonyl group.
Nucleic Acids Res., 27, 1999
1B94
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BU of 1b94 by Molmil
RESTRICTION ENDONUCLEASE ECORV WITH CALCIUM
Descriptor: CALCIUM ION, DNA (5'-D(*AP*AP*AP*GP*AP*TP*AP*TP*CP*TP*T)-3'), RESTRICTION ENDONUCLEASE ECORV
Authors:Thomas, M.P, Halford, S.E, Brady, R.L.
Deposit date:1999-02-19
Release date:1999-02-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural analysis of a mutational hot-spot in the EcoRV restriction endonuclease: a catalytic role for a main chain carbonyl group.
Nucleic Acids Res., 27, 1999
1B97
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BU of 1b97 by Molmil
ANALYSIS OF A MUTATIONAL HOT-SPOT IN THE ECORV RESTRICTION ENDONUCLEASE: A CATALYTIC ROLE FOR A MAIN CHAIN CARBONYL GROUP
Descriptor: DNA (5'-D(*AP*AP*AP*GP*AP*TP*AP*TP*CP*TP*T)-3'), RESTRICTION ENDONUCLEASE ECORV
Authors:Thomas, M.P, Halford, S.E, Brady, R.L.
Deposit date:1999-02-19
Release date:1999-02-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural analysis of a mutational hot-spot in the EcoRV restriction endonuclease: a catalytic role for a main chain carbonyl group.
Nucleic Acids Res., 27, 1999
6BG0
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BU of 6bg0 by Molmil
Caspase-3 Mutant - D9A,D28A,S150D
Descriptor: AC-ASP-GLU-VAL-ASP-CMK, AZIDE ION, Caspase-3, ...
Authors:Thomas, M.E, Grinshpon, R, Swartz, P.D, Clark, A.C.
Deposit date:2017-10-27
Release date:2018-02-21
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (2.125 Å)
Cite:Modifications to a common phosphorylation network provide individualized control in caspases.
J. Biol. Chem., 293, 2018
6BFO
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BU of 6bfo by Molmil
Caspase-3 Mutant- T245D
Descriptor: AC-ASP-GLU-VAL-ASP-CMK, AZIDE ION, Caspase-3, ...
Authors:Thomas, M.E, Grinshpon, R, Swartz, P.D, Clark, A.C.
Deposit date:2017-10-26
Release date:2018-02-21
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Modifications to a common phosphorylation network provide individualized control in caspases.
J. Biol. Chem., 293, 2018
6BG4
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BU of 6bg4 by Molmil
Caspase-3 Mutant- T152D
Descriptor: AC-ASP-GLU-VAL-ASP-CMK, AZIDE ION, CHLORIDE ION, ...
Authors:Thomas, M.E, Grinshpon, R, Swartz, P.D, Clark, A.C.
Deposit date:2017-10-27
Release date:2018-02-21
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Modifications to a common phosphorylation network provide individualized control in caspases.
J. Biol. Chem., 293, 2018
6BFK
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BU of 6bfk by Molmil
Caspase-3 Mutant- T245A
Descriptor: AC-ASP-GLU-VAL-ASP-CMK, Caspase-3, SODIUM ION
Authors:Thomas, M.E, Grinshpon, R, Swartz, P.D, Clark, A.C.
Deposit date:2017-10-26
Release date:2018-02-21
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (1.753 Å)
Cite:Modifications to a common phosphorylation network provide individualized control in caspases.
J. Biol. Chem., 293, 2018
6BGK
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BU of 6bgk by Molmil
Caspase-3 Mutant- D9A,D28A,T152D
Descriptor: ACE-ASP-GLU-VAL-ASP-0QE, AZIDE ION, CHLORIDE ION, ...
Authors:Thomas, M.E, Grinshpon, R, Swartz, P.D, Clark, A.C.
Deposit date:2017-10-28
Release date:2018-02-21
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Modifications to a common phosphorylation network provide individualized control in caspases.
J. Biol. Chem., 293, 2018
6BGQ
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BU of 6bgq by Molmil
Caspase-3 Mutant - S150D
Descriptor: AZIDE ION, Ac-Asp-Glu-Val-Asp-CMK, CHLORIDE ION, ...
Authors:Thomas, M.E, Grinshpon, R, Swartz, P.D, Clark, A.C.
Deposit date:2017-10-29
Release date:2018-02-21
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Modifications to a common phosphorylation network provide individualized control in caspases.
J. Biol. Chem., 293, 2018
6BH9
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BU of 6bh9 by Molmil
Caspase-3 Mutant - T152A
Descriptor: Ac-Asp-Glu-Val-Asp-CMK, CHLORIDE ION, Caspase-3, ...
Authors:Thomas, M.E, Grinshpon, R, Swartz, P.D, Clark, A.C.
Deposit date:2017-10-30
Release date:2018-02-21
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Modifications to a common phosphorylation network provide individualized control in caspases.
J. Biol. Chem., 293, 2018
6CWS
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BU of 6cws by Molmil
The NMR solution structure of CCL28
Descriptor: C-C motif chemokine 28
Authors:Thomas, M.A, Peterson, F.C, Volkman, B.F.
Deposit date:2018-03-30
Release date:2018-07-04
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The Solution Structure of CCL28 Reveals Structural Lability that Does Not Constrain Antifungal Activity.
J. Mol. Biol., 430, 2018
7ARE
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BU of 7are by Molmil
DNA origami pointer object v2
Descriptor: SCAFFOLD STRAND, STAPLE STRAND
Authors:Thomas, M, Feigl, E, Kohler, F, Kube, M, Nagel-Yuksel, B, Willner, E.M, Funke, J.J, Gerling, T, Stommer, P, Honemann, M.N, Martin, T.G, Scheres, S.H.W, Dietz, H.
Deposit date:2020-10-24
Release date:2020-11-18
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (7.4 Å)
Cite:Revealing the structures of megadalton-scale DNA complexes with nucleotide resolution.
Nat Commun, 11, 2020
6BFJ
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BU of 6bfj by Molmil
Caspase-3 Mutant - T245D,S249D
Descriptor: AZIDE ION, Ac-Asp-Glu-Val-Asp-CMK, Caspase-3
Authors:Thomas, M.E, Grinshpon, R, Swartz, P.D, Clark, A.C.
Deposit date:2017-10-26
Release date:2018-02-21
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (1.543 Å)
Cite:Modifications to a common phosphorylation network provide individualized control in caspases.
J. Biol. Chem., 293, 2018
6BFL
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BU of 6bfl by Molmil
Caspase-3 Mutant- D9A,D28A,T245D
Descriptor: AC-ASP-GLU-VAL-ASP-CMK, AZIDE ION, Caspase-3
Authors:Thomas, M.E, Grinshpon, R, Swartz, P.D, Clark, A.C.
Deposit date:2017-10-26
Release date:2018-02-21
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Modifications to a common phosphorylation network provide individualized control in caspases.
J. Biol. Chem., 293, 2018
6BDV
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BU of 6bdv by Molmil
Crystal structure of Caspase 3 S150A
Descriptor: AZIDE ION, Acetyl-Asp-Glu-Val-Asp-CMK, CHLORIDE ION, ...
Authors:Thomas, M.E, Grinshpon, R, Swartz, P.D, Clark, A.C.
Deposit date:2017-10-24
Release date:2018-02-14
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (1.938 Å)
Cite:Modifications to a common phosphorylation network provide individualized control in caspases.
J. Biol. Chem., 293, 2018
6BG1
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BU of 6bg1 by Molmil
Caspase-3 Mutant - D9A,D28A,S150E
Descriptor: AC-ASP-GLU-VAL-ASP-CMK, Caspase-3, SODIUM ION
Authors:Thomas, M.E, Grinshpon, R, Swartz, P.D, Clark, A.C.
Deposit date:2017-10-27
Release date:2018-02-21
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Modifications to a common phosphorylation network provide individualized control in caspases.
J. Biol. Chem., 293, 2018
6BGR
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BU of 6bgr by Molmil
Caspase-3 Mutant - S150E
Descriptor: AZIDE ION, Ac-Asp-Glu-Val-Asp-CMK, Caspase-3
Authors:Thomas, M.E, Grinshpon, R, Swartz, P.D, Clark, A.C.
Deposit date:2017-10-29
Release date:2018-02-21
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Modifications to a common phosphorylation network provide individualized control in caspases.
J. Biol. Chem., 293, 2018
6BHA
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BU of 6bha by Molmil
Caspase-3 Mutant - T152V
Descriptor: Ac-Asp-Glu-Val-Asp-CMK, Caspase-3
Authors:Thomas, M.E, Grinshpon, R, Swartz, P.D, Clark, A.C.
Deposit date:2017-10-30
Release date:2018-02-21
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (1.603 Å)
Cite:Modifications to a common phosphorylation network provide individualized control in caspases.
J. Biol. Chem., 293, 2018
6BGS
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BU of 6bgs by Molmil
Caspase-3 Mutant - S150Y
Descriptor: Ac-Asp-Glu-Val-Asp-CMK, Caspase-3
Authors:Thomas, M.E, Grinshpon, R, Swartz, P.D, Clark, A.C.
Deposit date:2017-10-29
Release date:2018-02-21
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Modifications to a common phosphorylation network provide individualized control in caspases.
J. Biol. Chem., 293, 2018
6G7C
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BU of 6g7c by Molmil
Nt2-CTD domains of the TssA component from the type VI secretion system of Aeromonas hydrophila.
Descriptor: ImpA-related domain protein
Authors:Dix, S.D, Owen, H.J, Sun, R, Ahmad, A, Shastri, S, Spiewak, H.L, Mosby, D.J, Harris, M.J, Batters, S.L, Tzokov, S.B, Sedelnikova, S.E, Baker, P.J, Bullough, P.A, Rice, D.W, Thomas, M.S.
Deposit date:2018-04-05
Release date:2018-11-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.13 Å)
Cite:Structural insights into the function of type VI secretion system TssA subunits.
Nat Commun, 9, 2018
5CQF
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BU of 5cqf by Molmil
Crystal structure of L-lysine 6-monooxygenase from Pseudomonas syringae
Descriptor: IODIDE ION, L-lysine 6-monooxygenase
Authors:Michalska, K, Bigelow, L, Jedrzejczak, R, Weerth, R.S, Cao, H, Yennamalli, R, Phillips Jr, G.N, Thomas, M.G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-07-21
Release date:2015-09-30
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Crystal structure of L-lysine 6-monooxygenase from Pseudomonas syringae
To Be Published
6XVB
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BU of 6xvb by Molmil
Crystal structure of the kinase domain of human c-KIT with a cyclic imidate inhibitor covalently bound to Cys788
Descriptor: Mast/stem cell growth factor receptor Kit,Mast/stem cell growth factor receptor Kit, ~{N}-(4,4-dimethyl-2-propyl-3,1-benzoxazin-6-yl)-2-[3-methoxy-5-(7-methoxyquinolin-4-yl)oxy-pyridin-2-yl]ethanamide
Authors:Schimpl, M, McAuley, K, Hoyt, E.A, Thomas, M, Bodnarchuk, M.S, Lewis, H.J, Barratt, D, Deery, M.J, Ogg, D.J, Bernardes, G.J.L, Ward, R.A, Kettle, J.G, Waring, M.J.
Deposit date:2020-01-21
Release date:2020-05-27
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Alkynyl Benzoxazines and Dihydroquinazolines as Cysteine Targeting Covalent Warheads and Their Application in Identification of Selective Irreversible Kinase Inhibitors.
J.Am.Chem.Soc., 142, 2020
6XVK
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BU of 6xvk by Molmil
Crystal structure of the KDR (VEGFR2) kinase domain in complex with a type-II inhibitor bearing an acrylamide
Descriptor: Vascular endothelial growth factor receptor 2, ~{N}-(4,4-dimethyl-2-prop-1-ynyl-3,1-benzoxazin-6-yl)-2-[3-methoxy-5-(7-methoxyquinolin-4-yl)oxy-pyridin-2-yl]ethanamide
Authors:Schimpl, M, McAuley, K, Hoyt, E.A, Thomas, M, Bodnarchuk, M.S, Lewis, H.J, Barratt, D, Deery, M.J, Ogg, D.J, Bernardes, G.J.L, Ward, R.A, Kettle, J.G, Waring, M.J.
Deposit date:2020-01-22
Release date:2020-05-27
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Alkynyl Benzoxazines and Dihydroquinazolines as Cysteine Targeting Covalent Warheads and Their Application in Identification of Selective Irreversible Kinase Inhibitors.
J.Am.Chem.Soc., 142, 2020
6XV9
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BU of 6xv9 by Molmil
Crystal structure of the kinase domain of human c-KIT in complex with a type-II inhibitor
Descriptor: Mast/stem cell growth factor receptor Kit,Mast/stem cell growth factor receptor Kit, ~{N}-[3-[(dimethylamino)methyl]-5-methyl-phenyl]-2-[3-methoxy-5-(7-methoxyquinolin-4-yl)oxy-pyridin-2-yl]ethanamide
Authors:Ogg, D.J, Howard, T, McAuley, K, Hoyt, E.A, Thomas, M, Bodnarchuk, M.S, Lewis, H.J, Barratt, D, Deery, M.J, Bernardes, G.J.L, Ward, R.A, Kettle, J.G, Waring, M.J.
Deposit date:2020-01-21
Release date:2020-05-27
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.38 Å)
Cite:Alkynyl Benzoxazines and Dihydroquinazolines as Cysteine Targeting Covalent Warheads and Their Application in Identification of Selective Irreversible Kinase Inhibitors.
J.Am.Chem.Soc., 142, 2020

 

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