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PDB: 80 results

5ILP
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H64Q sperm whale myoglobin with a Fe-tolyl moiety
Descriptor: GLYCEROL, Myoglobin, SULFATE ION, ...
Authors:Wang, B, Thomas, L.M, Richter-Addo, G.B.
Deposit date:2016-03-04
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Organometallic myoglobins: Formation of Fe-carbon bonds and distal pocket effects on aryl ligand conformations.
J. Inorg. Biochem., 164, 2016
5IKS
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Wild-type sperm whale myoglobin with a Fe-phenyl moiety
Descriptor: GLYCEROL, Myoglobin, SULFATE ION, ...
Authors:Wang, B, Thomas, L.M, Richter-Addo, G.B.
Deposit date:2016-03-03
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Organometallic myoglobins: Formation of Fe-carbon bonds and distal pocket effects on aryl ligand conformations.
J. Inorg. Biochem., 164, 2016
5ILM
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H64A sperm whale myoglobin with a Fe-chlorophenyl moiety
Descriptor: (4-chlorophenyl)[3,3'-(7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-diyl-kappa~4~N~21~,N~22~,N~23~,N~24~)di(propanoato)(2-)]iron, GLYCEROL, Myoglobin, ...
Authors:Wang, B, Thomas, L.M, Richter-Addo, G.B.
Deposit date:2016-03-04
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Organometallic myoglobins: Formation of Fe-carbon bonds and distal pocket effects on aryl ligand conformations.
J. Inorg. Biochem., 164, 2016
5ILR
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H64Q sperm whale myoglobin with a Fe-chlorophenyl moiety
Descriptor: (4-chlorophenyl)[3,3'-(7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-diyl-kappa~4~N~21~,N~22~,N~23~,N~24~)di(propanoato)(2-)]iron, GLYCEROL, Myoglobin, ...
Authors:Wang, B, Thomas, L.M, Richter-Addo, G.B.
Deposit date:2016-03-04
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Organometallic myoglobins: Formation of Fe-carbon bonds and distal pocket effects on aryl ligand conformations.
J. Inorg. Biochem., 164, 2016
8FDL
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Human Hemoglobin with Nitrosochloramphenicol
Descriptor: GLYCEROL, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Powell, S.M, Richter-Addo, G.B, Thomas, L.M.
Deposit date:2022-12-03
Release date:2023-07-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structural investigations of heme protein derivatives resulting from reactions of aryl- and alkylhydroxylamines with human hemoglobin.
J.Inorg.Biochem., 246, 2023
8FDJ
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Wild-Type Sperm Whale Myoglobin in Complex with Nitrosobenzene
Descriptor: Myoglobin, NITROSOBENZENE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Powell, S.M, Wang, B, Thomas, L.M, Richter-Addo, G.B.
Deposit date:2022-12-03
Release date:2023-07-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structural investigations of heme protein derivatives resulting from reactions of aryl- and alkylhydroxylamines with human hemoglobin.
J.Inorg.Biochem., 246, 2023
8FDK
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Phenylhydroxylamine in Reaction with Human Hemoglobin
Descriptor: GLYCEROL, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Powell, S.M, Thomas, L.M, Richter-Addo, G.B.
Deposit date:2022-12-03
Release date:2023-07-12
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal structural investigations of heme protein derivatives resulting from reactions of aryl- and alkylhydroxylamines with human hemoglobin.
J.Inorg.Biochem., 246, 2023
8FDN
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Human Hemoglobin with N-tertbutylhydroxylamine
Descriptor: GLYCEROL, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Powell, S.M, Richter-Addo, G.B, Thomas, L.M.
Deposit date:2022-12-03
Release date:2023-07-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structural investigations of heme protein derivatives resulting from reactions of aryl- and alkylhydroxylamines with human hemoglobin.
J.Inorg.Biochem., 246, 2023
8FDM
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Human Hemoglobin in Complex with Nitrosomethane
Descriptor: GLYCEROL, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Powell, S.M, Richter-Addo, G.B, Thomas, L.M.
Deposit date:2022-12-03
Release date:2023-07-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal structural investigations of heme protein derivatives resulting from reactions of aryl- and alkylhydroxylamines with human hemoglobin.
J.Inorg.Biochem., 246, 2023
4M4B
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Human Hemoglobin Nitroethane Modified
Descriptor: GLYCEROL, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Yi, J, Thomas, L.M, Richter-Addo, G.B.
Deposit date:2013-08-06
Release date:2014-07-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Degradation of human hemoglobin by organic C-nitroso compounds.
Chem.Commun.(Camb.), 49, 2013
4M4A
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Human Hemoglobin Nitromethane Modified
Descriptor: GLYCEROL, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Yi, J, Guan, Y, Thomas, L.M, Richter-Addo, G.B.
Deposit date:2013-08-06
Release date:2014-07-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Degradation of human hemoglobin by organic C-nitroso compounds.
Chem.Commun.(Camb.), 49, 2013
3V2V
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Nitrite Bound Chlorin Substituted Myoglobin- Method 1
Descriptor: Fe(III) pyropheophorbide-a methyl ester, Myoglobin, NITRITE ION, ...
Authors:Yi, J, Thomas, L.M, Ricther-Addo, G.B.
Deposit date:2011-12-12
Release date:2012-11-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Distal pocket control of nitrite binding in myoglobin
Angew.Chem.Int.Ed.Engl., 51, 2012
1P7Q
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BU of 1p7q by Molmil
Crystal Structure of HLA-A2 Bound to LIR-1, a Host and Viral MHC Receptor
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-2 alpha chain, ...
Authors:Willcox, B.E, Thomas, L.M, Bjorkman, P.J.
Deposit date:2003-05-05
Release date:2003-10-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal structure of HLA-A2 bound to LIR-1, a host and viral major histocompatibility complex receptor.
Nat.Immunol., 4, 2003
3V2Z
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BU of 3v2z by Molmil
Nitrite Bound Chlorin Substituted Myoglobin- Method 2
Descriptor: Fe(III) pyropheophorbide-a methyl ester, Myoglobin, NITRITE ION, ...
Authors:Yi, J, Thomas, L.M, Ricther-Addo, G.B.
Deposit date:2011-12-12
Release date:2012-11-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Distal pocket control of nitrite binding in myoglobin
Angew.Chem.Int.Ed.Engl., 51, 2012
3UH1
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Crystal Structure of Saccharopine Dehydrogenase from Saccharomyces cerevisiae with bound saccharopine and NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, GLYCEROL, N-(5-AMINO-5-CARBOXYPENTYL)GLUTAMIC ACID, ...
Authors:Kumar, V.P, Thomas, L.M, Bobyk, K.D, Andi, B, West, A.H, Cook, P.F.
Deposit date:2011-11-03
Release date:2012-02-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Evidence in Support of Lysine 77 and Histidine 96 as Acid-Base Catalytic Residues in Saccharopine Dehydrogenase from Saccharomyces cerevisiae.
Biochemistry, 51, 2012
3UGK
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Crystal Structure of C205S mutant and Saccharopine Dehydrogenase from Saccharomyces cerevisiae.
Descriptor: Saccharopine dehydrogenase [NAD+, L-lysine-forming]
Authors:Cook, P.F, Kumar, V.P, Thomas, L.M, West, A.H, Bobyk, K.D.
Deposit date:2011-11-02
Release date:2012-02-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Evidence in Support of Lysine 77 and Histidine 96 as Acid-Base Catalytic Residues in Saccharopine Dehydrogenase from Saccharomyces cerevisiae.
Biochemistry, 51, 2012
1NM9
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BU of 1nm9 by Molmil
Crystal structure of recombinant human salivary amylase mutant W58A
Descriptor: 4-amino-4,6-dideoxy-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, 5-HYDROXYMETHYL-CHONDURITOL, Alpha-amylase, ...
Authors:Ramasubbu, N, Ragunath, C, Mishra, P.J, Thomas, L.M.
Deposit date:2003-01-09
Release date:2004-01-20
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Human salivary alpha-amylase Trp58 situated at subsite -2 is critical for enzyme activity.
Eur.J.Biochem., 271, 2004
3UHA
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BU of 3uha by Molmil
Crystal Structure of Saccharopine Dehydrogenase from Saccharomyces cervisiae complexed with NAD.
Descriptor: CHLORIDE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Saccharopine dehydrogenase [NAD+, ...
Authors:Cook, P.F, Kumar, V.P, Thomas, L.M, West, A.H, Bobyk, K.D.
Deposit date:2011-11-03
Release date:2012-02-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Evidence in Support of Lysine 77 and Histidine 96 as Acid-Base Catalytic Residues in Saccharopine Dehydrogenase from Saccharomyces cerevisiae.
Biochemistry, 51, 2012
8FB0
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BU of 8fb0 by Molmil
H64Q Myoglobin in complex with acetamide
Descriptor: ACETAMIDE, GLYCEROL, Myoglobin, ...
Authors:Powell, S.M, Thomas, L.M, Richter-Addo, G.B.
Deposit date:2022-11-29
Release date:2023-06-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Interactions of metronidazole and chloramphenicol with myoglobin: Crystal structure of a Mb-acetamide product.
J Porphyr Phthalocyanines, 27, 2023
6MX2
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BU of 6mx2 by Molmil
Crystal Structure of ClpP1 from Clostridium difficile 630.
Descriptor: ATP-dependent Clp protease proteolytic subunit, GLYCEROL, SODIUM ION
Authors:Lavey, N.P, Thomas, L.M, Duerfeldt, A.S.
Deposit date:2018-10-30
Release date:2018-11-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of ClpP1 from Clostridium difficile 630.
To Be Published
8F9H
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H64A swMb-MeNO adduct
Descriptor: Myoglobin, NITROSOMETHANE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Herrera, V.E, Thomas, L.M.
Deposit date:2022-11-23
Release date:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Insights into Nitrosoalkane Binding to Myoglobin Provided by Crystallography of Wild-Type and Distal Pocket Mutant Derivatives.
Biochemistry, 62, 2023
8F9N
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H64A swMb-iPrNO adduct
Descriptor: 2-nitrosopropane, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Herrera, V.E, Thomas, L.M.
Deposit date:2022-11-24
Release date:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Insights into Nitrosoalkane Binding to Myoglobin Provided by Crystallography of Wild-Type and Distal Pocket Mutant Derivatives.
Biochemistry, 62, 2023
8F9J
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H64A swMb-PrNO adduct
Descriptor: 1-nitrosopropane, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Herrera, V.E, Thomas, L.M.
Deposit date:2022-11-23
Release date:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Insights into Nitrosoalkane Binding to Myoglobin Provided by Crystallography of Wild-Type and Distal Pocket Mutant Derivatives.
Biochemistry, 62, 2023
8U0N
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Crystal structure of isopentenyl phosphate kinase from Thermococcus paralvinellae bound to 2-cyclopentylideneethyl monophosphate and ADP
Descriptor: 2-cyclopentylideneethyl dihydrogen phosphate, ADENOSINE-5'-DIPHOSPHATE, Isopentenyl phosphate kinase
Authors:Singh, S, Thomas, L.M, Johnson, B.P, Brown, S.
Deposit date:2023-08-29
Release date:2024-02-21
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Ternary complexes of isopentenyl phosphate kinase from Thermococcus paralvinellae reveal molecular determinants of non-natural substrate specificity.
Proteins, 92, 2024
8U0L
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Crystal structure of isopentenyl phosphate kinase from Thermococcus paralvinellae bound to (E)-But-2-en-1-yl monophosphate and ADP
Descriptor: (2E)-but-2-en-1-yl dihydrogen phosphate, ADENOSINE-5'-DIPHOSPHATE, Isopentenyl phosphate kinase
Authors:Singh, S, Thomas, L.M, Johnson, B.P, Brown, S.
Deposit date:2023-08-29
Release date:2024-02-21
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Ternary complexes of isopentenyl phosphate kinase from Thermococcus paralvinellae reveal molecular determinants of non-natural substrate specificity.
Proteins, 92, 2024

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PDB entries from 2024-10-30

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