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PDB: 63 件
5YU8
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BU of 5yu8 by Molmil
Cofilin decorated actin filament
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Tanaka, K, Narita, A.
登録日2017-11-21
公開日2018-05-23
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural basis for cofilin binding and actin filament disassembly
Nat Commun, 9, 2018
3VWI
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BU of 3vwi by Molmil
High resolution crystal structure of FraC in the monomeric form
分子名称: AMMONIUM ION, CHLORIDE ION, Fragaceatoxin C, ...
著者Tanaka, K, Morante, K, Caaveiro, J.M.M, Gonzalez-Manas, J.M, Tsumoto, K.
登録日2012-08-23
公開日2013-08-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for self-assembly of a cytolytic pore lined by protein and lipid
Nat Commun, 6, 2015
4TSN
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BU of 4tsn by Molmil
Crystal structure of FraC with POC bound (crystal form II)
分子名称: ACETATE ION, Fragaceatoxin C, GLYCEROL, ...
著者Caaveiro, J.M.M, Tanaka, K, Tsumoto, K.
登録日2014-06-19
公開日2015-03-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Structural basis for self-assembly of a cytolytic pore lined by protein and lipid
Nat Commun, 6, 2015
4TSQ
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BU of 4tsq by Molmil
Crystal structure of FraC with DHPC bound (crystal form III)
分子名称: 1,2-dihexanoyl-sn-glycero-3-phosphocholine, CHLORIDE ION, Fragaceatoxin C, ...
著者Caaveiro, J.M.M, Tanaka, K, Tsumoto, K.
登録日2014-06-19
公開日2015-03-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural basis for self-assembly of a cytolytic pore lined by protein and lipid
Nat Commun, 6, 2015
4TSO
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BU of 4tso by Molmil
Crystal structure of FraC with DHPC bound (crystal form I)
分子名称: 1,2-dihexanoyl-sn-glycero-3-phosphocholine, Fragaceatoxin C, PHOSPHATE ION, ...
著者Caaveiro, J.M.M, Tanaka, K, Tsumoto, K.
登録日2014-06-19
公開日2015-03-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for self-assembly of a cytolytic pore lined by protein and lipid
Nat Commun, 6, 2015
4TSP
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BU of 4tsp by Molmil
Crystal structure of FraC with DHPC bound (crystal form II)
分子名称: 1,2-dihexanoyl-sn-glycero-3-phosphocholine, Fragaceatoxin C, PHOSPHATE ION, ...
著者Caaveiro, J.M.M, Tanaka, K, Tsumoto, K.
登録日2014-06-19
公開日2015-03-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural basis for self-assembly of a cytolytic pore lined by protein and lipid
Nat Commun, 6, 2015
4TSY
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BU of 4tsy by Molmil
Crystal structure of FraC with lipids
分子名称: 2-[[(E,2S,3R)-2-(hexanoylamino)-3-oxidanyl-dec-4-enoxy]-oxidanyl-phosphoryl]oxyethyl-trimethyl-azanium, Fragaceatoxin C, HEPTANE-1,2,3-TRIOL, ...
著者Caaveiro, J.M.M, Tanaka, K, Tsumoto, K.
登録日2014-06-19
公開日2015-03-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.14 Å)
主引用文献Structural basis for self-assembly of a cytolytic pore lined by protein and lipid
Nat Commun, 6, 2015
4TSL
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BU of 4tsl by Molmil
Crystal structure of FraC with POC bound (crystal form I)
分子名称: ACETATE ION, FORMIC ACID, Fragaceatoxin C, ...
著者Caaveiro, J.M.M, Tanaka, K, Tsumoto, K.
登録日2014-06-19
公開日2015-03-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural basis for self-assembly of a cytolytic pore lined by protein and lipid
Nat Commun, 6, 2015
8B69
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BU of 8b69 by Molmil
Heterotetramer of K-Ras4B(G12V) and Rgl2(RBD)
分子名称: Isoform 2B of GTPase KRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
著者Tariq, M, Fairall, L, Romartinez-Alonso, B, Dominguez, C, Schwabe, J.W.R, Tanaka, K.
登録日2022-09-26
公開日2023-08-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.07 Å)
主引用文献Structural insights into the complex of oncogenic KRas4B G12V and Rgl2, a RalA/B activator.
Life Sci Alliance, 7, 2024
1G2P
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BU of 1g2p by Molmil
CRYSTAL STRUCTURE OF ADENINE PHOSPHORIBOSYLTRANSFERASE
分子名称: ADENINE PHOSPHORIBOSYLTRANSFERASE 1, SULFATE ION
著者Shi, W, Tanaka, K.S.E, Almo, S.C, Schramm, V.L.
登録日2000-10-20
公開日2001-12-05
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural analysis of adenine phosphoribosyltransferase from Saccharomyces cerevisiae.
Biochemistry, 40, 2001
2RJ2
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BU of 2rj2 by Molmil
Crystal Structure of the Sugar Recognizing SCF Ubiquitin Ligase at 1.7 Resolution
分子名称: CHLORIDE ION, F-box only protein 2, NICKEL (II) ION
著者Vaijayanthimala, S, Velmurugan, D, Mizushima, T, Yamane, T, Yoshida, Y, Tanaka, K.
登録日2007-10-14
公開日2008-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of the Sugar Recognizing SCF Ubiquitin Ligase at 1.7 Resolution
To be Published
1UMI
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BU of 1umi by Molmil
Structural basis of sugar-recognizing ubiquitin ligase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, F-box only protein 2
著者Mizushima, T, Hirao, T, Yoshida, Y, Lee, S.J, Chiba, T, Iwai, K, Yamaguchi, Y, Kato, K, Tsukihara, T, Tanaka, K.
登録日2003-10-01
公開日2004-04-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis of sugar-recognizing ubiquitin ligase.
Nat.Struct.Mol.Biol., 11, 2004
1UMH
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BU of 1umh by Molmil
Structural basis of sugar-recognizing ubiquitin ligase
分子名称: F-box only protein 2, NICKEL (II) ION
著者Mizushima, T, Hirao, T, Yoshida, Y, Lee, S.J, Chiba, T, Iwai, K, Yamaguchi, Y, Kato, K, Tsukihara, T, Tanaka, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-10-01
公開日2004-04-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of sugar-recognizing ubiquitin ligase
NAT.STRUCT.MOL.BIOL., 11, 2004
2RRU
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BU of 2rru by Molmil
Solution structure of the UBA omain of p62 and its interaction with ubiquitin
分子名称: Sequestosome-1
著者Isogai, S, Morimoto, D, Arita, K, Unzai, S, Tenno, T, Hasegawa, J, Sou, Y, Komatsu, M, Tanaka, K, Shirakawa, M, Tochio, H.
登録日2011-06-09
公開日2011-06-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Crystal structure of the UBA omain of p62 and its interaction with ubiquitin
To be Published
4IFL
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BU of 4ifl by Molmil
Crystal Structures of apo Keap1, Keap1-peptide, and Keap1-compound complexes
分子名称: Nrf2 peptide, kelch-like ECH-associated protein 1
著者Pan, H, Lin, M, Yang, Y, Callaway, K, Baker, J, Diep, L, Yan, J, Tanaka, K, Zhu, Y.L, Konradi, A.W, Jobling, M, Tam, D, Ren, Z, Cheung, H, Bova, M, Riley, B.E, Yao, N, Artis, D.R.
登録日2012-12-14
公開日2013-12-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structures of apo Keap1, Keap1-peptide, and Keap1-compound complexes
Acta Crystallogr.,Sect.D
4IFN
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BU of 4ifn by Molmil
Crystal Structures of apo Keap1, Keap1-peptide, and Keap1-compound complexes
分子名称: (1R,2R)-2-{[(1S)-1-[(1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)methyl]-3,4-dihydroisoquinolin-2(1H)-yl]carbonyl}cyclohexanecarboxylic acid, kelch-like ECH-associated protein 1
著者Pan, H, Lin, M, Yang, Y, Callaway, K, Baker, J, Diep, L, Yan, J, Tanaka, K, Zhu, Y.L, Konradi, A.W, Jobling, M, Tam, D, Ren, Z, Cheung, H, Bova, M, Riley, B.E, Yao, N, Artis, D.R.
登録日2012-12-14
公開日2013-12-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structures of apo Keap1, Keap1-peptide, and Keap1-compound complexes
Acta Crystallogr.,Sect.D
4IFJ
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BU of 4ifj by Molmil
Crystal Structures of apo Keap1, Keap1-peptide, and Keap1-compound complexes
分子名称: Kelch-like ECH-associated protein 1
著者Pan, H, Lin, M, Yang, Y, Callaway, K, Baker, J, Diep, L, Yan, J, Tanaka, K, Zhu, Y.L, Konradi, A.W, Jobling, M, Tam, D, Ren, Z, Cheung, H, Bova, M, Riley, B.E, Yao, N, Artis, D.R.
登録日2012-12-14
公開日2014-08-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structures of apo Keap1, Keap1-peptide, and Keap1-compound complexes
To be Published
4H52
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BU of 4h52 by Molmil
Wild-type influenza N2 neuraminidase covalent complex with 3-fluoro-Neu5Ac
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5-acetamido-3,5-dideoxy-3-fluoro-D-erythro-alpha-L-manno-non-2-ulopyranosonic acid, CALCIUM ION, ...
著者Vavricka, C.J, Liu, Y, Kiyota, H, Sriwilaijaroen, N, Qi, J, Tanaka, K, Wu, Y, Li, Q, Li, Y, Yan, J, Suzuki, Y, Gao, G.F.
登録日2012-09-18
公開日2013-02-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.803 Å)
主引用文献Influenza neuraminidase operates via a nucleophilic mechanism and can be targeted by covalent inhibitors
Nat Commun, 4, 2013
4H53
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BU of 4h53 by Molmil
Influenza N2-Tyr406Asp neuraminidase in complex with beta-Neu5Ac
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Vavricka, C.J, Liu, Y, Kiyota, H, Sriwilaijaroen, N, Qi, J, Tanaka, K, Wu, Y, Li, Q, Li, Y, Yan, J, Suzuki, Y, Gao, G.F.
登録日2012-09-18
公開日2013-02-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Influenza neuraminidase operates via a nucleophilic mechanism and can be targeted by covalent inhibitors
Nat Commun, 4, 2013
1L1Q
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BU of 1l1q by Molmil
Crystal Structure of APRTase from Giardia lamblia Complexed with 9-deazaadenine
分子名称: 9-DEAZAADENINE, Adenine phosphoribosyltransferase, SULFATE ION
著者Shi, W, Sarver, A.E, Wang, C.C, Tanaka, K.S, Almo, S.C, Schramm, V.L.
登録日2002-02-19
公開日2002-11-27
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Closed Site Complexes of Adenine Phosphoribosyltransferase from Giardia lamblia Reveal a Mechanism of Ribosyl Migration.
J.Biol.Chem., 277, 2002
1L1R
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BU of 1l1r by Molmil
Crystal Structure of APRTase from Giardia lamblia Complexed with 9-deazaadenine, Mg2+ and PRPP
分子名称: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, 9-DEAZAADENINE, Adenine phosphoribosyltransferase, ...
著者Shi, W, Sarver, A.E, Wang, C.C, Tanaka, K.S, Almo, S.C, Schramm, V.L.
登録日2002-02-19
公開日2002-11-27
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Closed Site Complexes of Adenine Phosphoribosyltransferase from Giardia lamblia Reveal a Mechanism of Ribosyl Migration.
J.Biol.Chem., 277, 2002
2E33
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BU of 2e33 by Molmil
Structural basis for selection of glycosylated substrate by SCFFbs1 ubiquitin ligase
分子名称: F-box only protein 2, Ribonuclease pancreatic, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Mizushima, T, Yoshida, Y, Kumanomidou, T, Hasegawa, Y, Yamane, T, Tanaka, K.
登録日2006-11-20
公開日2007-03-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for the selection of glycosylated substrates by SCFFbs1 ubiquitin ligase
Proc.Natl.Acad.Sci.Usa, 104, 2007
2E31
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BU of 2e31 by Molmil
Structural basis for selection of glycosylated substrate by SCFFbs1 ubiquitin ligase
分子名称: F-box only protein 2, S-phase kinase-associated protein 1A
著者Mizushima, T, Yoshida, Y, Kumanomidou, T, Hasegawa, Y, Yamane, T, Tanaka, K.
登録日2006-11-20
公開日2007-03-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for the selection of glycosylated substrates by SCFFbs1 ubiquitin ligase
Proc.Natl.Acad.Sci.Usa, 104, 2007
2E32
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BU of 2e32 by Molmil
Structural basis for selection of glycosylated substrate by SCFFbs1 ubiquitin ligase
分子名称: F-box only protein 2, S-phase kinase-associated protein 1A
著者Mizushima, T, Yoshida, Y, Kumanomidou, T, Hasegawa, Y, Yamane, T, Tanaka, K.
登録日2006-11-20
公開日2007-03-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.52 Å)
主引用文献Structural basis for the selection of glycosylated substrates by SCFFbs1 ubiquitin ligase
Proc.Natl.Acad.Sci.Usa, 104, 2007
5BPG
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BU of 5bpg by Molmil
Crystal structure of the water-soluble FraC purified starting from the trans-membrane pore
分子名称: CHLORIDE ION, Fragaceatoxin C, GLYCEROL
著者Caaveiro, J.M.M, Tanaka, K, Tsumoto, K.
登録日2015-05-28
公開日2015-11-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Bidirectional Transformation of a Metamorphic Protein between the Water-Soluble and Transmembrane Native States
Biochemistry, 54, 2015

 

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