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PDB: 71 件
6DTH
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BU of 6dth by Molmil
Crystal structure of Haemophilus influenzae OppA complex with RPPGFSPFR
分子名称: ARG-PRO-PRO-GLY-PHE, Periplasmic oligopeptide-binding protein, SULFATE ION
著者Tanaka, K.J, Pinkett, H.W.
登録日2018-06-16
公開日2018-11-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Oligopeptide-binding protein from nontypeableHaemophilus influenzaehas ligand-specific sites to accommodate peptides and heme in the binding pocket.
J. Biol. Chem., 294, 2019
6DQR
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BU of 6dqr by Molmil
Crystal structure of Haemophilus influenzae OppA complex with MGG
分子名称: ACETATE ION, MET-GLY-GLY, Periplasmic oligopeptide-binding protein, ...
著者Tanaka, K.J, Pinkett, H.W.
登録日2018-06-11
公開日2018-11-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Oligopeptide-binding protein from nontypeableHaemophilus influenzaehas ligand-specific sites to accommodate peptides and heme in the binding pocket.
J. Biol. Chem., 294, 2019
8TV8
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BU of 8tv8 by Molmil
Crystal structure of nontypeable Haemophilus influenzae SapA
分子名称: ABC-type transport system, periplasmic component, involved in antimicrobial peptide resistance
著者Tanaka, K.J, Buechel, E.R, Rivera, K.G, Pinkett, H.W.
登録日2023-08-17
公開日2024-01-17
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Antimicrobial Peptide Recognition Motif of the Substrate Binding Protein SapA from Nontypeable Haemophilus influenzae .
Biochemistry, 63, 2024
3VWI
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BU of 3vwi by Molmil
High resolution crystal structure of FraC in the monomeric form
分子名称: AMMONIUM ION, CHLORIDE ION, Fragaceatoxin C, ...
著者Tanaka, K, Morante, K, Caaveiro, J.M.M, Gonzalez-Manas, J.M, Tsumoto, K.
登録日2012-08-23
公開日2013-08-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for self-assembly of a cytolytic pore lined by protein and lipid
Nat Commun, 6, 2015
6DTF
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BU of 6dtf by Molmil
Crystal structure of Haemophilus influenzae OppA complex with KKK
分子名称: LYS-LYS-LYS, Periplasmic oligopeptide-binding protein, SULFATE ION
著者Tanaka, K.J, Pinkett, H.W.
登録日2018-06-16
公開日2018-11-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Oligopeptide-binding protein from nontypeableHaemophilus influenzaehas ligand-specific sites to accommodate peptides and heme in the binding pocket.
J. Biol. Chem., 294, 2019
6DQT
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BU of 6dqt by Molmil
Crystal structure of Haemophilus influenzae OppA complex with LGG
分子名称: ACETATE ION, LEU-GLY-GLY, Periplasmic oligopeptide-binding protein, ...
著者Tanaka, K.J, Pinkett, H.W.
登録日2018-06-11
公開日2018-11-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Oligopeptide-binding protein from nontypeableHaemophilus influenzaehas ligand-specific sites to accommodate peptides and heme in the binding pocket.
J. Biol. Chem., 294, 2019
6DQQ
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BU of 6dqq by Molmil
Crystal structure of Haemophilus influenzae OppA complex with endogenous peptide
分子名称: ACETATE ION, ALA-ALA-ALA-ALA, Periplasmic oligopeptide-binding protein, ...
著者Tanaka, K.J, Pinkett, H.W.
登録日2018-06-11
公開日2018-11-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Oligopeptide-binding protein from nontypeableHaemophilus influenzaehas ligand-specific sites to accommodate peptides and heme in the binding pocket.
J. Biol. Chem., 294, 2019
6DQU
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BU of 6dqu by Molmil
Crystal structure of Haemophilus influenzae OppA complex with GIINTL
分子名称: GLY-ILE-ILE-ASN-THR-LEU, Periplasmic oligopeptide-binding protein, SULFATE ION
著者Tanaka, K.J, Pinkett, H.W.
登録日2018-06-11
公開日2018-11-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Oligopeptide-binding protein from nontypeableHaemophilus influenzaehas ligand-specific sites to accommodate peptides and heme in the binding pocket.
J. Biol. Chem., 294, 2019
6DTG
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BU of 6dtg by Molmil
Crystal structure of Haemophilus influenzae OppA complex with YLGANGRGGGS
分子名称: Periplasmic oligopeptide-binding protein, TYR-LEU-GLY-ALA-ASN-GLY
著者Tanaka, K.J, Pinkett, H.W.
登録日2018-06-16
公開日2018-11-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Oligopeptide-binding protein from nontypeableHaemophilus influenzaehas ligand-specific sites to accommodate peptides and heme in the binding pocket.
J. Biol. Chem., 294, 2019
5YU8
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BU of 5yu8 by Molmil
Cofilin decorated actin filament
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Tanaka, K, Narita, A.
登録日2017-11-21
公開日2018-05-23
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural basis for cofilin binding and actin filament disassembly
Nat Commun, 9, 2018
5WTQ
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BU of 5wtq by Molmil
Crystal structure of human proteasome-assembling chaperone PAC4
分子名称: CHLORIDE ION, NICKEL (II) ION, Proteasome assembly chaperone 4
著者Kurimoto, E, Satoh, T, Ito, Y, Ishihara, E, Tanaka, K, Kato, K.
登録日2016-12-13
公開日2017-03-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of human proteasome assembly chaperone PAC4 involved in proteasome formation
Protein Sci., 26, 2017
2RJ2
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BU of 2rj2 by Molmil
Crystal Structure of the Sugar Recognizing SCF Ubiquitin Ligase at 1.7 Resolution
分子名称: CHLORIDE ION, F-box only protein 2, NICKEL (II) ION
著者Vaijayanthimala, S, Velmurugan, D, Mizushima, T, Yamane, T, Yoshida, Y, Tanaka, K.
登録日2007-10-14
公開日2008-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of the Sugar Recognizing SCF Ubiquitin Ligase at 1.7 Resolution
To be Published
4TSO
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BU of 4tso by Molmil
Crystal structure of FraC with DHPC bound (crystal form I)
分子名称: 1,2-dihexanoyl-sn-glycero-3-phosphocholine, Fragaceatoxin C, PHOSPHATE ION, ...
著者Caaveiro, J.M.M, Tanaka, K, Tsumoto, K.
登録日2014-06-19
公開日2015-03-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for self-assembly of a cytolytic pore lined by protein and lipid
Nat Commun, 6, 2015
4TSP
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BU of 4tsp by Molmil
Crystal structure of FraC with DHPC bound (crystal form II)
分子名称: 1,2-dihexanoyl-sn-glycero-3-phosphocholine, Fragaceatoxin C, PHOSPHATE ION, ...
著者Caaveiro, J.M.M, Tanaka, K, Tsumoto, K.
登録日2014-06-19
公開日2015-03-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural basis for self-assembly of a cytolytic pore lined by protein and lipid
Nat Commun, 6, 2015
4TSY
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BU of 4tsy by Molmil
Crystal structure of FraC with lipids
分子名称: 2-[[(E,2S,3R)-2-(hexanoylamino)-3-oxidanyl-dec-4-enoxy]-oxidanyl-phosphoryl]oxyethyl-trimethyl-azanium, Fragaceatoxin C, HEPTANE-1,2,3-TRIOL, ...
著者Caaveiro, J.M.M, Tanaka, K, Tsumoto, K.
登録日2014-06-19
公開日2015-03-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.14 Å)
主引用文献Structural basis for self-assembly of a cytolytic pore lined by protein and lipid
Nat Commun, 6, 2015
4TSL
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BU of 4tsl by Molmil
Crystal structure of FraC with POC bound (crystal form I)
分子名称: ACETATE ION, FORMIC ACID, Fragaceatoxin C, ...
著者Caaveiro, J.M.M, Tanaka, K, Tsumoto, K.
登録日2014-06-19
公開日2015-03-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural basis for self-assembly of a cytolytic pore lined by protein and lipid
Nat Commun, 6, 2015
4TSN
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BU of 4tsn by Molmil
Crystal structure of FraC with POC bound (crystal form II)
分子名称: ACETATE ION, Fragaceatoxin C, GLYCEROL, ...
著者Caaveiro, J.M.M, Tanaka, K, Tsumoto, K.
登録日2014-06-19
公開日2015-03-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Structural basis for self-assembly of a cytolytic pore lined by protein and lipid
Nat Commun, 6, 2015
4TSQ
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BU of 4tsq by Molmil
Crystal structure of FraC with DHPC bound (crystal form III)
分子名称: 1,2-dihexanoyl-sn-glycero-3-phosphocholine, CHLORIDE ION, Fragaceatoxin C, ...
著者Caaveiro, J.M.M, Tanaka, K, Tsumoto, K.
登録日2014-06-19
公開日2015-03-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural basis for self-assembly of a cytolytic pore lined by protein and lipid
Nat Commun, 6, 2015
3VLE
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BU of 3vle by Molmil
Crystal structure of yeast proteasome interacting protein
分子名称: DNA mismatch repair protein HSM3
著者Takagi, K, Kim, S, Kato, K, Tanaka, K, Saeki, Y, Mizushima, T.
登録日2011-12-01
公開日2012-02-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Structural basis for specific recognition of Rpt1, an ATPase subunit of the 26S proteasome, by a proteasome-dedicated chaperone Hsm3
J.Biol.Chem., 287, 2012
3VLD
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BU of 3vld by Molmil
Crystal structure of yeast proteasome interacting protein
分子名称: DNA mismatch repair protein HSM3
著者Takagi, K, Kim, S, Kato, K, Tanaka, K, Saeki, Y, Mizushima, T.
登録日2011-12-01
公開日2012-02-22
最終更新日2012-04-18
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural basis for specific recognition of Rpt1, an ATPase subunit of the 26S proteasome, by a proteasome-dedicated chaperone Hsm3
J.Biol.Chem., 287, 2012
3VLF
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BU of 3vlf by Molmil
Crystal structure of yeast proteasome interacting protein
分子名称: 26S protease regulatory subunit 7 homolog, DNA mismatch repair protein HSM3
著者Takagi, K, Kim, S, Kato, K, Tanaka, K, Saeki, Y, Mizushima, T.
登録日2011-12-01
公開日2012-02-22
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Structural basis for specific recognition of Rpt1, an ATPase subunit of the 26S proteasome, by a proteasome-dedicated chaperone Hsm3
J.Biol.Chem., 287, 2012
3VL1
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BU of 3vl1 by Molmil
Crystal structure of yeast Rpn14
分子名称: 26S proteasome regulatory subunit RPN14
著者Kim, S, Nishide, A, Saeki, Y, Takagi, K, Tanaka, K, Kato, K, Mizushima, T.
登録日2011-11-28
公開日2012-05-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献New crystal structure of the proteasome-dedicated chaperone Rpn14 at 1.6 A resolution
Acta Crystallogr.,Sect.F, 68, 2012
8B69
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BU of 8b69 by Molmil
Heterotetramer of K-Ras4B(G12V) and Rgl2(RBD)
分子名称: Isoform 2B of GTPase KRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
著者Tariq, M, Fairall, L, Romartinez-Alonso, B, Dominguez, C, Schwabe, J.W.R, Tanaka, K.
登録日2022-09-26
公開日2023-08-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.07 Å)
主引用文献Structural insights into the complex of oncogenic KRas4B G12V and Rgl2, a RalA/B activator.
Life Sci Alliance, 7, 2024
8AU4
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BU of 8au4 by Molmil
Structural insights reveal a heterotetramer between oncogenic K-Ras4BG12V and Rgl2, a RalA/B activator
分子名称: Ral guanine nucleotide dissociation stimulator-like 2
著者Tariq, M, Ikeya, T, Togashi, N, Fairall, L, Alejo, C.B, Kamei, S, Alonso, B.R, Campillo, M.A.M, Hudson, A, Ito, Y, Schwabe, J, Dominguez, C, Tanaka, K.
登録日2022-08-25
公開日2023-08-23
最終更新日2023-10-25
実験手法SOLUTION NMR
主引用文献Structural insights into the complex of oncogenic KRas4B G12V and Rgl2, a RalA/B activator.
Life Sci Alliance, 7, 2024
2RRU
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BU of 2rru by Molmil
Solution structure of the UBA omain of p62 and its interaction with ubiquitin
分子名称: Sequestosome-1
著者Isogai, S, Morimoto, D, Arita, K, Unzai, S, Tenno, T, Hasegawa, J, Sou, Y, Komatsu, M, Tanaka, K, Shirakawa, M, Tochio, H.
登録日2011-06-09
公開日2011-06-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Crystal structure of the UBA omain of p62 and its interaction with ubiquitin
To be Published

 

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