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PDB: 280 件
1VCX
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Neutron Crystal Structure of the Wild Type Rubredoxin from Pyrococcus Furiosus at 1.5A Resolution
分子名称: FE (III) ION, Rubredoxin
著者Kurihara, K, Tanaka, I, Chatake, T, Adams, M.W.W, Jenney Jr, F.E, Moiseeva, N, Bau, R, Niimura, N.
登録日2004-03-17
公開日2004-08-10
最終更新日2023-10-25
実験手法NEUTRON DIFFRACTION (1.5 Å)
主引用文献Neutron crystallographic study on rubredoxin from Pyrococcus furiosus by BIX-3, a single-crystal diffractometer for biomacromolecules
Proc.Natl.Acad.Sci.USA, 101, 2004
1VGJ
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BU of 1vgj by Molmil
Crystal structure of 2'-5' RNA ligase from Pyrococcus horikoshii
分子名称: Hypothetical protein PH0099
著者Yao, M, Morita, H, Okada, A, Tanaka, I.
登録日2004-04-27
公開日2005-06-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献The structure of Pyrococcus horikoshii 2'-5' RNA ligase at 1.94 A resolution reveals a possible open form with a wider active-site cleft
ACTA CRYSTALLOGR.,SECT.F, 62, 2006
2CVI
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Crystal structure of hypothetical protein PHS023 from Pyrococcus horikoshii
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 75aa long hypothetical regulatory protein AsnC, POTASSIUM ION
著者Kitago, Y, Sakai, N, Matsumoto, D, Yao, M, Aizawa, T, Demura, M, Kawano, K, Nitta, K, Watanabe, N, Tanaka, I.
登録日2005-06-03
公開日2006-06-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of hypothetical protein PHS023 from Pyrococcus horikoshii
TO BE PUBLISHED
2D74
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BU of 2d74 by Molmil
Crystal structure of translation initiation factor aIF2betagamma heterodimer
分子名称: Translation initiation factor 2 beta subunit, Translation initiation factor 2 gamma subunit, ZINC ION
著者Sokabe, M, Yao, M, Sakai, N, Toya, S, Tanaka, I.
登録日2005-11-16
公開日2006-07-25
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of archaeal translational initiation factor 2 betagamma-GDP reveals significant conformational change of the beta-subunit and switch 1 region.
Proc.Natl.Acad.Sci.USA, 103, 2006
2D5V
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BU of 2d5v by Molmil
Crystal structure of HNF-6alpha DNA-binding domain in complex with the TTR promoter
分子名称: 5'-D(*AP*TP*TP*AP*TP*TP*GP*AP*CP*TP*TP*AP*GP*A)-3', 5'-D(*TP*CP*TP*AP*AP*GP*TP*CP*AP*AP*TP*AP*AP*T)-3', ACETATE ION, ...
著者Iyaguchi, D, Yao, M, Watanabe, N, Nishihira, J, Tanaka, I.
登録日2005-11-07
公開日2006-12-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献DNA recognition mechanism of the ONECUT homeodomain of transcription factor HNF-6
Structure, 15, 2007
2DCU
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BU of 2dcu by Molmil
Crystal structure of translation initiation factor aIF2betagamma heterodimer with GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Translation initiation factor 2 beta subunit, ...
著者Sokabe, M, Yao, M, Sakai, N, Toya, S, Tanaka, I.
登録日2006-01-16
公開日2006-07-25
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structure of archaeal translational initiation factor 2 betagamma-GDP reveals significant conformational change of the beta-subunit and switch 1 region.
Proc.Natl.Acad.Sci.USA, 103, 2006
2DF4
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Structure of tRNA-Dependent Amidotransferase GatCAB complexed with Mn2+
分子名称: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C, Glutamyl-tRNA(Gln) amidotransferase subunit A, ...
著者Nakamura, A, Yao, M, Tanaka, I.
登録日2006-02-23
公開日2006-07-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Ammonia channel couples glutaminase with transamidase reactions in GatCAB
Science, 312, 2006
2DQN
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BU of 2dqn by Molmil
Structure of tRNA-Dependent Amidotransferase GatCAB complexed with Asn
分子名称: ASPARAGINE, Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C, ...
著者Nakamura, A, Yao, M, Tanaka, I.
登録日2006-05-29
公開日2006-07-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Ammonia channel couples glutaminase with transamidase reactions in GatCAB
Science, 312, 2006
2DU9
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BU of 2du9 by Molmil
crystal structure of the transcriptional factor from C.glutamicum
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Predicted transcriptional regulators
著者Gao, Y, Yao, M, Tanaka, I.
登録日2006-07-20
公開日2007-07-24
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献The structures of transcription factor CGL2947 from Corynebacterium glutamicum in two crystal forms: A novel homodimer assembling and the implication for effector-binding mode
Protein Sci., 16, 2007
2E6U
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BU of 2e6u by Molmil
Crystal structure of hypothetical protein PH1109 from Pyrococcus horikoshii
分子名称: CALCIUM ION, CHLORIDE ION, COENZYME A, ...
著者Kitago, Y, Min, Y, Watanabe, N, Tanaka, I.
登録日2007-01-03
公開日2007-01-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure determination of a novel protein by sulfur SAD using chromium radiation in combination with a new crystal-mounting method
ACTA CRYSTALLOGR.,SECT.D, 61, 2005
2EEX
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BU of 2eex by Molmil
Crystal structure of Cel44A, GH family 44 endoglucanase from Clostridium thermocellum
分子名称: CALCIUM ION, CHLORIDE ION, Endoglucanase, ...
著者Kitago, Y, Karita, S, Watanabe, N, Sakka, K, Tanaka, I.
登録日2007-02-19
公開日2007-09-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of Cel44A, a glycoside hydrolase family 44 endoglucanase from Clostridium thermocellum.
J.Biol.Chem., 282, 2007
2E52
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BU of 2e52 by Molmil
Crystal structural analysis of HindIII restriction endonuclease in complex with cognate DNA at 2.0 angstrom resolution
分子名称: ACETATE ION, DNA (5'-D(*DGP*DCP*DCP*DAP*DAP*DGP*DCP*DTP*DTP*DGP*DGP*DC)-3'), GLYCEROL, ...
著者Watanabe, N, Sato, C, Tanaka, I.
登録日2006-12-18
公開日2007-12-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of restriction endonuclease HindIII in complex with its cognate DNA and divalent cations
Acta Crystallogr.,Sect.D, 65, 2009
2CZV
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BU of 2czv by Molmil
Crystal structure of archeal RNase P protein ph1481p in complex with ph1877p
分子名称: ACETIC ACID, Ribonuclease P protein component 2, Ribonuclease P protein component 3, ...
著者Kawano, S, Kakuta, Y, Nakashima, T, Tanaka, I, Kimura, M.
登録日2005-07-19
公開日2006-06-27
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of protein Ph1481p in complex with protein Ph1877p of archaeal RNase P from Pyrococcus horikoshii OT3: implication of dimer formation of the holoenzyme
J.Mol.Biol., 357, 2006
2EFA
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BU of 2efa by Molmil
Neutron crystal structure of cubic insulin at pD6.6
分子名称: Insulin
著者Ishikawa, T, Tanaka, I, Niimura, N.
登録日2007-02-22
公開日2008-01-22
最終更新日2023-10-25
実験手法NEUTRON DIFFRACTION (2.7 Å)
主引用文献A neutron crystallographic analysis of a cubic porcine insulin at pD 6.6
Chem.Phys., 345, 2008
2EJ1
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BU of 2ej1 by Molmil
Crystal structure of Cel44A, GH family 44 endoglucanase from Clostridium thermocellum
分子名称: CALCIUM ION, CHLORIDE ION, Endoglucanase, ...
著者Kitago, Y, Karita, S, Watanabe, N, Sakka, K, Tanaka, I.
登録日2007-03-14
公開日2007-09-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Cel44A, a glycoside hydrolase family 44 endoglucanase from Clostridium thermocellum.
J.Biol.Chem., 282, 2007
2E8G
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BU of 2e8g by Molmil
The structure of protein from P. horikoshii at 1.7 angstrom resolution
分子名称: Hypothetical protein PH0536
著者Gao, Y.G, Yao, M, Tanaka, I.
登録日2007-01-19
公開日2008-01-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of protein PH0536 from Pyrococcus horikoshii at 1.7 A resolution reveals a novel assembly of an oligonucleotide/oligosaccharide-binding fold and an alpha-helical bundle
Proteins, 71, 2008
2E0P
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BU of 2e0p by Molmil
The crystal structure of Cel44A
分子名称: CALCIUM ION, CHLORIDE ION, Endoglucanase, ...
著者Kitago, Y, Karita, S, Watanabe, N, Sakka, K, Tanaka, I.
登録日2006-10-11
公開日2007-09-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of Cel44A, a glycoside hydrolase family 44 endoglucanase from Clostridium thermocellum.
J.Biol.Chem., 282, 2007
2EK5
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BU of 2ek5 by Molmil
Crystal structure of the transcriptional factor from C.glutamicum at 2.2 angstrom resolution
分子名称: Predicted transcriptional regulators
著者Gao, Y.G, Yao, M, Tanaka, I.
登録日2007-03-22
公開日2007-09-18
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The structures of transcription factor CGL2947 from Corynebacterium glutamicum in two crystal forms: A novel homodimer assembling and the implication for effector-binding mode
Protein Sci., 16, 2007
2EO7
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BU of 2eo7 by Molmil
Crystal structure of Cel44A, GH family 44 endoglucanase from Clostridium thermocellum
分子名称: CALCIUM ION, CHLORIDE ION, Endoglucanase, ...
著者Kitao, Y, Karita, S, Watanabe, N, Sakka, K, Tanaka, I.
登録日2007-03-29
公開日2007-09-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of Cel44A, a glycoside hydrolase family 44 endoglucanase from Clostridium thermocellum.
J.Biol.Chem., 282, 2007
2EQD
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BU of 2eqd by Molmil
Crystal structure of Cel44A, GH family 44 endoglucanase from Clostridium thermocellum
分子名称: CALCIUM ION, CHLORIDE ION, Endoglucanase, ...
著者Kitago, Y, Karita, S, Watanabe, N, Sakka, K, Tanaka, I.
登録日2007-03-30
公開日2007-09-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of Cel44A, a glycoside hydrolase family 44 endoglucanase from Clostridium thermocellum.
J.Biol.Chem., 282, 2007
2CWI
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BU of 2cwi by Molmil
X-ray crystal structure analysis of recombinant wild-type canine milk lysozyme (apo-type)
分子名称: Lysozyme C, milk isozyme, SULFATE ION
著者Akieda, D, Yasui, M, Aizawa, T, Yao, M, Watanabe, N, Tanaka, I, Demura, M, Kawano, K, Nitta, K.
登録日2005-06-20
公開日2006-06-20
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (1.941 Å)
主引用文献Construction of an expression system of canine milk lysozyme in the methylotrophic yeast Pichia pastoris
To be Published
2F2A
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BU of 2f2a by Molmil
Structure of tRNA-Dependent Amidotransferase GatCAB complexed with Gln
分子名称: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C, GLUTAMINE, ...
著者Nakamura, A, Yao, M, Tanaka, I.
登録日2005-11-15
公開日2006-07-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Ammonia channel couples glutaminase with transamidase reactions in GatCAB
Science, 312, 2006
2E4T
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BU of 2e4t by Molmil
Crystal structure of Cel44A, GH family 44 endoglucanase from Clostridium thermocellum
分子名称: CALCIUM ION, CHLORIDE ION, Endoglucanase, ...
著者Kitago, Y, Karita, S, Watanabe, N, Sakka, K, Tanaka, I.
登録日2006-12-16
公開日2007-09-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (0.96 Å)
主引用文献Crystal structure of Cel44A, a glycoside hydrolase family 44 endoglucanase from Clostridium thermocellum.
J.Biol.Chem., 282, 2007
2F7L
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BU of 2f7l by Molmil
Crystal structure of Sulfolobus tokodaii phosphomannomutase/phosphoglucomutase
分子名称: 455aa long hypothetical phospho-sugar mutase, SULFATE ION
著者Kawamura, T, Sakai, N, Akutsu, J, Zhang, Z, Watanabe, N, Kawarabayashi, Y, Tanaka, I.
登録日2005-12-01
公開日2006-12-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of Sulfolobus tokodaii phosphomannomutase/phosphoglucomutase
To be Published
2D5K
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Crystal structure of Dps from Staphylococcus aureus
分子名称: Dps family protein, GLYCEROL
著者Tanaka, Y, Yao, M, Watanabe, N, Tanaka, I.
登録日2005-11-02
公開日2006-10-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Nucleoid compaction by MrgA(Asp56Ala/Glu60Ala) does not contribute to staphylococcal cell survival against oxidative stress and phagocytic killing by macrophages
FEMS Microbiol. Lett., 360, 2014

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