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PDB: 601 件
2Z2Z
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Crystal structure of unautoprocessed form of Tk-subtilisin soaked by 10mM CaCl2
分子名称: CALCIUM ION, Tk-subtilisin precursor
著者Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
登録日2007-05-29
公開日2007-12-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation
J.Mol.Biol., 372, 2007
2Z2X
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BU of 2z2x by Molmil
Crystal structure of mature form of Tk-subtilisin
分子名称: CALCIUM ION, Tk-subtilisin
著者Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
登録日2007-05-29
公開日2007-12-04
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation
J.Mol.Biol., 372, 2007
2Z1D
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BU of 2z1d by Molmil
Crystal structure of [NiFe] hydrogenase maturation protein, HypD from Thermococcus kodakaraensis
分子名称: Hydrogenase expression/formation protein hypD, IRON/SULFUR CLUSTER
著者Watanabe, S, Matsumi, R, Arai, T, Atomi, H, Imanaka, T, Miki, K.
登録日2007-05-08
公開日2007-07-17
最終更新日2014-11-12
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Crystal Structures of [NiFe] Hydrogenase Maturation Proteins HypC, HypD, and HypE: Insights into Cyanation Reaction by Thiol Redox Signaling
Mol.Cell, 27, 2007
3A3P
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BU of 3a3p by Molmil
Crystal structure of complex between E201A/SA-subtilisin and Tk-propeptide
分子名称: CALCIUM ION, Tk-subtilisin, ZINC ION
著者Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
登録日2009-06-15
公開日2009-08-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Identification of the interactions critical for propeptide-catalyzed folding of Tk-subtilisin
J.Mol.Biol., 394, 2009
3A44
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BU of 3a44 by Molmil
Crystal structure of HypA in the dimeric form
分子名称: Hydrogenase nickel incorporation protein hypA, ZINC ION
著者Watanabe, S, Arai, T, Matsumi, R, Atomi, H, Imanaka, T, Miki, K.
登録日2009-06-30
公開日2009-10-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.31 Å)
主引用文献Crystal structure of HypA, a nickel-binding metallochaperone for [NiFe] hydrogenase maturation.
J.Mol.Biol., 394, 2009
3BN4
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BU of 3bn4 by Molmil
Carboxysome Subunit, CcmK1
分子名称: Carbon dioxide-concentrating mechanism protein ccmK homolog 1, SULFATE ION
著者Tanaka, S, Sawaya, M.R, Yeates, T.O.
登録日2007-12-13
公開日2008-03-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Atomic-level models of the bacterial carboxysome shell.
Science, 319, 2008
3A3O
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BU of 3a3o by Molmil
Crystal structure of complex between SA-subtilisin and Tk-propeptide with deletion of the five C-terminal residues
分子名称: CALCIUM ION, Tk-subtilisin, ZINC ION
著者Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
登録日2009-06-15
公開日2009-08-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Identification of the interactions critical for propeptide-catalyzed folding of Tk-subtilisin
J.Mol.Biol., 394, 2009
4G4H
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BU of 4g4h by Molmil
100K X-ray diffraction study of carboplatin binding to HEWL in DMSO media after 13 months of crystal storage
分子名称: CHLORIDE ION, DIMETHYL SULFOXIDE, Lysozyme C, ...
著者Tanley, S.W.M, Schreurs, A.M.M, Kroon-Batenburg, L.M.J, Helliwell, J.R.
登録日2012-07-16
公開日2012-11-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Room-temperature X-ray diffraction studies of cisplatin and carboplatin binding to His15 of HEWL after prolonged chemical exposure.
Acta Crystallogr.,Sect.F, 68, 2012
4G4C
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BU of 4g4c by Molmil
Room temperature X-ray diffraction study of carboplatin binding to HEWL in DMSO media after 13 months of crystal storage
分子名称: CHLORIDE ION, DIMETHYL SULFOXIDE, Lysozyme C, ...
著者Tanley, S.W.M, Schreurs, A.M.M, Kroon-Batenburg, L.M.J, Helliwell, J.R.
登録日2012-07-16
公開日2012-11-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Room-temperature X-ray diffraction studies of cisplatin and carboplatin binding to His15 of HEWL after prolonged chemical exposure.
Acta Crystallogr.,Sect.F, 68, 2012
7JT0
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BU of 7jt0 by Molmil
Crystal structure of SARS-CoV-2 3CL protease in complex with MAC5576
分子名称: 3C-like proteinase, PHOSPHATE ION, thiophene-2-carbaldehyde
著者Iketani, S, Forouhar, F, Liu, H, Hong, S.J, Lin, F.-Y, Nair, M.S, Zask, A, Huang, Y, Xing, L, Stockwell, B.R, Chavez, A, Ho, D.D.
登録日2020-08-16
公開日2021-03-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Lead compounds for the development of SARS-CoV-2 3CL protease inhibitors.
Nat Commun, 12, 2021
7JW8
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BU of 7jw8 by Molmil
Crystal structure of SARS-CoV-2 3CL protease in complex with compound 4 in space group P1
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3C-like proteinase, ethyl (4R)-4-[[(2S)-4-methyl-2-[[(2S,3R)-3-[(2-methylpropan-2-yl)oxy]-2-(phenylmethoxycarbonylamino)butanoyl]amino]pentanoyl]amino]-5-[(3S)-2-oxidanylidenepyrrolidin-3-yl]pentanoate
著者Iketani, S, Forouhar, F, Liu, H, Hong, S.J, Lin, F.-Y, Nair, M.S, Zask, A, Xing, L, Stockwell, B.R, Chavez, A, Ho, D.D.
登録日2020-08-25
公開日2021-03-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Lead compounds for the development of SARS-CoV-2 3CL protease inhibitors.
Nat Commun, 12, 2021
7JSU
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BU of 7jsu by Molmil
Crystal structure of SARS-CoV-2 3CL protease in complex with GC376
分子名称: 3C-like proteinase, N~2~-[(benzyloxy)carbonyl]-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-leucinamide, PHOSPHATE ION
著者Iketani, S, Forouhar, F, Liu, H, Hong, S.J, Lin, F.-Y, Nair, M.S, Zask, A, Xing, L, Stockwell, B.R, Chavez, A, Ho, D.D.
登録日2020-08-16
公開日2021-03-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Lead compounds for the development of SARS-CoV-2 3CL protease inhibitors.
Nat Commun, 12, 2021
2Z9H
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BU of 2z9h by Molmil
Ethanolamine utilization protein, EutN
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, CHLORIDE ION, Ethanolamine utilization protein eutN
著者Tanaka, S, Sawaya, M.R, Yeates, T.O.
登録日2007-09-20
公開日2007-10-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献The crystal structure of ethanolamine utilization protein EutN from E. coli
To be Published
7JT7
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BU of 7jt7 by Molmil
Crystal structure of SARS-CoV-2 3CL protease in complex with compound 4
分子名称: 3C-like proteinase, ethyl (4R)-4-[[(2S)-4-methyl-2-[[(2S,3R)-3-[(2-methylpropan-2-yl)oxy]-2-(phenylmethoxycarbonylamino)butanoyl]amino]pentanoyl]amino]-5-[(3S)-2-oxidanylidenepyrrolidin-3-yl]pentanoate
著者Iketani, S, Forouhar, F, Liu, H, Hong, S.J, Lin, F.-Y, Nair, M.S, Zask, A, Huang, Y, Xing, L, Stockwell, B.R, Chavez, A, Ho, D.D.
登録日2020-08-17
公開日2021-03-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Lead compounds for the development of SARS-CoV-2 3CL protease inhibitors.
Nat Commun, 12, 2021
2ZQ5
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BU of 2zq5 by Molmil
Crystal structure of sulfotransferase STF1 from Mycobacterium tuberculosis H37Rv (type1 form)
分子名称: Putative uncharacterized protein
著者Tanaka, S, Kimura, M, Kakuta, Y.
登録日2008-08-06
公開日2009-09-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of sulfotransferase STF1 from Mycobacterium tuberculosis H37Rv
To be Published
5AUQ
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BU of 5auq by Molmil
Crystal structure of ATPase-type HypB in the nucleotide free state
分子名称: ATPase involved in chromosome partitioning, ParA/MinD family, Mrp homolog, ...
著者Watanabe, S, Kawashima, T, Nishitani, Y, Miki, K.
登録日2015-05-27
公開日2015-06-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.525 Å)
主引用文献Structural basis of a Ni acquisition cycle for [NiFe] hydrogenase by Ni-metallochaperone HypA and its enhancer
Proc.Natl.Acad.Sci.USA, 112, 2015
5AUO
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BU of 5auo by Molmil
Crystal structure of the HypAB-Ni complex (AMPPCP)
分子名称: ATPase involved in chromosome partitioning, ParA/MinD family, Mrp homolog, ...
著者Watanabe, S, Kawashima, T, Nishitani, Y, Miki, K.
登録日2015-05-27
公開日2015-06-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis of a Ni acquisition cycle for [NiFe] hydrogenase by Ni-metallochaperone HypA and its enhancer
Proc.Natl.Acad.Sci.USA, 112, 2015
7KH8
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BU of 7kh8 by Molmil
Human LMPTP in complex with inhibitor
分子名称: 3-[(2,6-dichlorophenyl)methyl]-8-(2-methylphenyl)-3H-purin-6-amine, Low molecular weight phosphotyrosine protein phosphatase, NITRATE ION
著者Stanford, S.M, Diaz, M.A, Ardecky, R.J, Zou, J, Roosild, T, Holmes, Z.J, Hedrick, M.P, Rodiles, S, Santelli, E, Chung, T.D.Y, Jackson, M.R, Bottini, N, Pinkerton, A.B.
登録日2020-10-20
公開日2021-05-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Discovery of Orally Bioavailable Purine-Based Inhibitors of the Low-Molecular-Weight Protein Tyrosine Phosphatase.
J.Med.Chem., 64, 2021
5AUP
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BU of 5aup by Molmil
Crystal structure of the HypAB complex
分子名称: ATPase involved in chromosome partitioning, ParA/MinD family, Mrp homolog, ...
著者Watanabe, S, Kawashima, T, Nishitani, Y, Miki, K.
登録日2015-05-27
公開日2015-06-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.102 Å)
主引用文献Structural basis of a Ni acquisition cycle for [NiFe] hydrogenase by Ni-metallochaperone HypA and its enhancer
Proc.Natl.Acad.Sci.USA, 112, 2015
7JST
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BU of 7jst by Molmil
Crystal structure of SARS-CoV-2 3CL in apo form
分子名称: 3C-like proteinase, PHOSPHATE ION
著者Iketani, S, Forouhar, F, Liu, H, Hong, S.J, Lin, F.-Y, Nair, M.S, Zask, A, Huang, Y, Xing, L, Stockwell, B.R, Chavez, A, Ho, D.D.
登録日2020-08-16
公開日2021-03-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Lead compounds for the development of SARS-CoV-2 3CL protease inhibitors.
Nat Commun, 12, 2021
4G4B
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BU of 4g4b by Molmil
Room temperature X-ray diffraction study of cisplatin binding to HEWL in DMSO media with NAG after 7 months of crystal storage
分子名称: CHLORIDE ION, Cisplatin, DIMETHYL SULFOXIDE, ...
著者Tanley, S.W.M, Schreurs, A.M.M, Kroon-Batenburg, L.M.J, Helliwell, J.R.
登録日2012-07-16
公開日2012-11-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Room-temperature X-ray diffraction studies of cisplatin and carboplatin binding to His15 of HEWL after prolonged chemical exposure.
Acta Crystallogr.,Sect.F, 68, 2012
5AUN
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BU of 5aun by Molmil
Crystal structure of the HypAB-Ni complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATPase involved in chromosome partitioning, ParA/MinD family, ...
著者Watanabe, S, Kawashima, T, Nishitani, Y, Miki, K.
登録日2015-05-27
公開日2015-06-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Structural basis of a Ni acquisition cycle for [NiFe] hydrogenase by Ni-metallochaperone HypA and its enhancer
Proc.Natl.Acad.Sci.USA, 112, 2015
2Z1E
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BU of 2z1e by Molmil
Crystal structure of HypE from Thermococcus kodakaraensis (outward form)
分子名称: Hydrogenase expression/formation protein HypE
著者Watanabe, S, Matsumi, R, Arai, T, Atomi, H, Imanaka, T, Miki, K.
登録日2007-05-08
公開日2007-07-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal Structures of [NiFe] Hydrogenase Maturation Proteins HypC, HypD, and HypE: Insights into Cyanation Reaction by Thiol Redox Signaling
Mol.Cell, 27, 2007
2Z1C
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BU of 2z1c by Molmil
Crystal structure of HypC from Thermococcus kodakaraensis KOD1
分子名称: GLYCEROL, Hydrogenase expression/formation protein HypC, TETRAETHYLENE GLYCOL
著者Watanabe, S, Matsumi, R, Arai, T, Atomi, H, Imanaka, T, Miki, K.
登録日2007-05-08
公開日2007-07-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structures of [NiFe] Hydrogenase Maturation Proteins HypC, HypD, and HypE: Insights into Cyanation Reaction by Thiol Redox Signaling
Mol.Cell, 27, 2007
8KDX
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BU of 8kdx by Molmil
Tau-S214 Phosphorylation Inhibits Fyn Kinase Interaction and Increases the Decay Time of NMDAR-mediated Current
分子名称: Microtubule-associated protein tau, Tyrosine-protein kinase Fyn
著者Padavattan, S, Jos, S.
登録日2023-08-10
公開日2024-02-28
実験手法X-RAY DIFFRACTION (1.01 Å)
主引用文献Tau-S214 Phosphorylation Inhibits Fyn Kinase Interaction and Increases the Decay Time of NMDAR-mediated Current.
J.Mol.Biol., 436, 2024

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件を2024-08-21に公開中

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