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PDB: 321 件
3VL7
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BU of 3vl7 by Molmil
3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 650 MPa
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CALCIUM ION, ...
著者Nagae, T, Watanabe, N.
登録日2011-11-29
公開日2012-02-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献High-pressure-induced water penetration into 3-isopropylmalate dehydrogenase
Acta Crystallogr.,Sect.D, 68, 2012
3VMK
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BU of 3vmk by Molmil
3-isopropylmalate dehydrogenase from Shewanella benthica DB21 MT-2
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CHLORIDE ION, ...
著者Nagae, T, Watanabe, N.
登録日2011-12-13
公開日2012-02-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Structural analysis of 3-isopropylmalate dehydrogenase from the obligate piezophile Shewanella benthica DB21MT-2 and the nonpiezophile Shewanella oneidensis MR-1
Acta Crystallogr.,Sect.F, 68, 2012
3VML
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BU of 3vml by Molmil
Chimera 3-isopropylmalate dehydrogenase between Shewanella oneidensis MR-1 (O) and Shewanella benthica DB21 MT-2 (M) from N-terminal: 20% O middle 70% M residual 10% O
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CHLORIDE ION, ...
著者Nagae, T, Watanabe, N.
登録日2011-12-13
公開日2012-12-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Structure analysis of chimeric 3-isopropylmalate dehydrogenase between the obligate piezophile Shewanella benthica DB21MT-2 and the nonpiezophile Shewanella oneidensis MR-1
To be Published
5AXC
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BU of 5axc by Molmil
Crystal structure of mouse SAHH complexed with 3'-keto aristeromycin
分子名称: (2S,3R,5R)-3-(6-amino-9H-purin-9-yl)-2-hydroxy-5-(hydroxymethyl)cyclopentanone, Adenosylhomocysteinase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Kusakabe, Y, Ishihara, M, Tanaka, N.
登録日2015-07-24
公開日2016-07-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure of mouse SAHH complexed with 3'-keto aristeromycin
To Be Published
3WVH
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BU of 3wvh by Molmil
Time-Resolved Crystal Structure of HindIII with 25sec soaking
分子名称: DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3'), GLYCEROL, MANGANESE (II) ION, ...
著者Kawamura, T, Kobayashi, T, Watanabe, N.
登録日2014-05-21
公開日2015-04-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献Analysis of the HindIII-catalyzed reaction by time-resolved crystallography
Acta Crystallogr.,Sect.D, 71, 2015
3WVI
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BU of 3wvi by Molmil
Time-Resolved Crystal Structure of HindIII with 40 sec soaking
分子名称: DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3'), GLYCEROL, MANGANESE (II) ION, ...
著者Kawamura, T, Kobayashi, T, Watanabe, N.
登録日2014-05-21
公開日2015-04-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Analysis of the HindIII-catalyzed reaction by time-resolved crystallography
Acta Crystallogr.,Sect.D, 71, 2015
3WVP
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BU of 3wvp by Molmil
Time-Resolved Crystal Structure of HindIII with 60sec soaking
分子名称: DNA (5'-D(*GP*CP*CP*A)-3'), DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3'), DNA (5'-D(P*AP*GP*CP*TP*TP*GP*GP*C)-3'), ...
著者Kawamura, T, Kobayashi, T, Watanabe, N.
登録日2014-06-02
公開日2015-04-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Analysis of the HindIII-catalyzed reaction by time-resolved crystallography
Acta Crystallogr.,Sect.D, 71, 2015
3VMJ
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BU of 3vmj by Molmil
3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CHLORIDE ION, ...
著者Nagae, T, Watanabe, N.
登録日2011-12-13
公開日2012-02-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Structural analysis of 3-isopropylmalate dehydrogenase from the obligate piezophile Shewanella benthica DB21MT-2 and the nonpiezophile Shewanella oneidensis MR-1
Acta Crystallogr.,Sect.F, 68, 2012
3VL3
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BU of 3vl3 by Molmil
3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 340 MPa
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CALCIUM ION, ...
著者Nagae, T, Watanabe, N.
登録日2011-11-29
公開日2012-02-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献High-pressure-induced water penetration into 3-isopropylmalate dehydrogenase
Acta Crystallogr.,Sect.D, 68, 2012
3VL2
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BU of 3vl2 by Molmil
3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 160 MPa
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CALCIUM ION, ...
著者Nagae, T, Watanabe, N.
登録日2011-11-29
公開日2012-02-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献High-pressure-induced water penetration into 3-isopropylmalate dehydrogenase
Acta Crystallogr.,Sect.D, 68, 2012
3WVG
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BU of 3wvg by Molmil
Time-Resolved Crystal Structure of HindIII with 0sec soaking
分子名称: DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3'), GLYCEROL, SODIUM ION, ...
著者Kawamura, T, Kobayashi, T, Watanabe, N.
登録日2014-05-21
公開日2015-04-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Analysis of the HindIII-catalyzed reaction by time-resolved crystallography
Acta Crystallogr.,Sect.D, 71, 2015
3WVK
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BU of 3wvk by Molmil
Time-Resolved Crystal Structure of HindIII with 230sec soaking
分子名称: DNA (5'-D(*GP*CP*CP*A)-3'), DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3'), DNA (5'-D(P*AP*GP*CP*TP*TP*GP*GP*C)-3'), ...
著者Kawamura, T, Kobayashi, T, Watanabe, N.
登録日2014-05-22
公開日2015-04-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Analysis of the HindIII-catalyzed reaction by time-resolved crystallography
Acta Crystallogr.,Sect.D, 71, 2015
3WZY
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BU of 3wzy by Molmil
S266A mutant 3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 580MPa - complex with IPM and Mg
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, MAGNESIUM ION
著者Nagae, T, Watanabe, N.
登録日2014-10-08
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Pressure Adaptation of 3-Isopropylmalate Dehydrogenase from the Extremely Piezophilic Bacterium Shewanella benthica is Attributed to just One Amino Acid Substitution
To be Published
3WZW
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BU of 3wzw by Molmil
3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 580MPa - complex with IPM and Mg
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, MAGNESIUM ION
著者Nagae, T, Watanabe, N.
登録日2014-10-08
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Pressure Adaptation of 3-Isopropylmalate Dehydrogenase from the Extremely Piezophilic Bacterium Shewanella benthica is Attributed to just One Amino Acid Substitution
To be Published
3WZV
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BU of 3wzv by Molmil
3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 0.1MPa - complex with IPM and Mg
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, MAGNESIUM ION
著者Nagae, T, Watanabe, N.
登録日2014-10-07
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Pressure Adaptation of 3-Isopropylmalate Dehydrogenase from the Extremely Piezophilic Bacterium Shewanella benthica is Attributed to just One Amino Acid Substitution
To be Published
3WZX
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BU of 3wzx by Molmil
S266A mutant 3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 0.1MPa - complex with IPM and Mg
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, MAGNESIUM ION
著者Nagae, T, Watanabe, N.
登録日2014-10-08
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Pressure Adaptation of 3-Isopropylmalate Dehydrogenase from the Extremely Piezophilic Bacterium Shewanella benthica is Attributed to just One Amino Acid Substitution
To be Published
4J94
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BU of 4j94 by Molmil
Crystal structure of MycP1 from the ESX-1 type VII secretion system
分子名称: Membrane-anchored mycosin mycp1
著者Solomonson, M, Wasney, G.A, Watanabe, N, Gruninger, R.J, Prehna, G, Strynadka, N.C.J.
登録日2013-02-15
公開日2013-05-01
最終更新日2013-07-03
実験手法X-RAY DIFFRACTION (1.857 Å)
主引用文献Structure of the Mycosin-1 Protease from the Mycobacterial ESX-1 Protein Type VII Secretion System.
J.Biol.Chem., 288, 2013
5Z98
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BU of 5z98 by Molmil
Crystal Structure of the Primate APOBEC3H Dimer mediated by RNA Duplex
分子名称: Apolipoprotein B mRNA editing enzyme catalytic polypeptide-like protein 3H, RNA (5'-R(*AP*UP*AP*CP*CP*CP*GP*GP*CP*A)-3'), RNA (5'-R(P*CP*UP*GP*CP*CP*GP*GP*GP*UP*A)-3'), ...
著者Matsuoka, T, Nagae, T, Ode, H, Watanabe, N, Iwatani, Y.
登録日2018-02-02
公開日2018-08-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis of chimpanzee APOBEC3H dimerization stabilized by double-stranded RNA.
Nucleic Acids Res., 46, 2018
3VP9
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BU of 3vp9 by Molmil
Crystal structure of the N-terminal domain of the yeast general corepressor Tup1p mutant
分子名称: 1,4-DIETHYLENE DIOXIDE, General transcriptional corepressor TUP1
著者Matsumura, H, Kusaka, N, Nakamura, T, Tanaka, N, Sagegami, K, Uegaki, K, Inoue, T, Mukai, Y.
登録日2012-02-28
公開日2012-06-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.799 Å)
主引用文献Crystal structure of the N-terminal domain of the yeast general corepressor Tup1p and its functional implications
J.Biol.Chem., 287, 2012
7K3N
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BU of 7k3n by Molmil
Crystal Structure of NSP1 from SARS-CoV-2
分子名称: Host translation inhibitor nsp1
著者Semper, C, Watanabe, N, Chang, C, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-09-11
公開日2020-09-30
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural characterization of nonstructural protein 1 from SARS-CoV-2.
Iscience, 24, 2021
3RED
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BU of 3red by Molmil
3.0 A structure of the Prunus mume hydroxynitrile lyase isozyme-1
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Hydroxynitrile lyase
著者Cielo, C.B.C, Yamane, T, Asano, Y, Watanabe, N, Suzuki, A, Fukuta, Y.
登録日2011-04-04
公開日2012-06-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.03 Å)
主引用文献Crystal Structure of a native FAD-dependent Hydroxynitrile Lyase derived from the Japanese apricot, Prunus mume
To be Published
4KPG
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BU of 4kpg by Molmil
Crystal structure of MycP1 from the ESX-1 type VII secretion system
分子名称: Membrane-anchored mycosin mycp1
著者Solomonson, M, Wasney, G.A, Watanabe, N, Gruninger, R.J, Prehna, G, Strynadka, N.C.J.
登録日2013-05-13
公開日2013-05-22
最終更新日2013-07-03
実験手法X-RAY DIFFRACTION (2.148 Å)
主引用文献Structure of the Mycosin-1 Protease from the Mycobacterial ESX-1 Protein Type VII Secretion System.
J.Biol.Chem., 288, 2013
3W4Y
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BU of 3w4y by Molmil
Crystal structure of yeast Erv1 core
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Mitochondrial FAD-linked sulfhydryl oxidase ERV1
著者Kawano, S, Terao, K, Watanabe, N, Endo, T.
登録日2013-01-17
公開日2013-03-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of yeast Erv1 core
To be published
3VP8
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BU of 3vp8 by Molmil
Crystal structure of the N-terminal domain of the yeast general corepressor Tup1p
分子名称: General transcriptional corepressor TUP1
著者Matsumura, H, Kusaka, N, Nakamura, T, Tanaka, N, Sagegami, K, Uegaki, K, Inoue, T, Mukai, Y.
登録日2012-02-28
公開日2012-06-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Crystal structure of the N-terminal domain of the yeast general corepressor Tup1p and its functional implications
J.Biol.Chem., 287, 2012
1WO1
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BU of 1wo1 by Molmil
Tachyplesin I in dodecylphosphocholine micelles
分子名称: Tachyplesin I
著者Mizuguchi, M, Kamata, S, Kawabata, S, Fujitani, N, Kawano, K.
登録日2004-08-11
公開日2005-08-09
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Solution structure of tachyplesin I in dodecylphosphocholine
to be published

221716

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