3VML
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3VP9
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![BU of 3vp9 by Molmil](/molmil-images/mine/3vp9) | Crystal structure of the N-terminal domain of the yeast general corepressor Tup1p mutant | 分子名称: | 1,4-DIETHYLENE DIOXIDE, General transcriptional corepressor TUP1 | 著者 | Matsumura, H, Kusaka, N, Nakamura, T, Tanaka, N, Sagegami, K, Uegaki, K, Inoue, T, Mukai, Y. | 登録日 | 2012-02-28 | 公開日 | 2012-06-13 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.799 Å) | 主引用文献 | Crystal structure of the N-terminal domain of the yeast general corepressor Tup1p and its functional implications J.Biol.Chem., 287, 2012
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3AUA
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![BU of 3aua by Molmil](/molmil-images/mine/3aua) | Crystal structure of the quaternary complex-2 of an isomerase | 分子名称: | 1-deoxy-D-xylulose 5-phosphate reductoisomerase, 3-[ethanoyl(hydroxy)amino]propylphosphonic acid, CALCIUM ION, ... | 著者 | Umeda, T, Tanaka, N, Kusakabe, Y, Nakanishi, M, Kitade, Y, Nakamura, K.T. | 登録日 | 2011-02-01 | 公開日 | 2011-08-10 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.15 Å) | 主引用文献 | Molecular basis of fosmidomycin's action on the human malaria parasite Plasmodium falciparum Sci Rep, 1, 2011
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3VL7
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1DR0
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![BU of 1dr0 by Molmil](/molmil-images/mine/1dr0) | STRUCTURE OF MODIFIED 3-ISOPROPYLMALATE DEHYDROGENASE AT THE C-TERMINUS, HD708 | 分子名称: | 3-ISOPROPYLMALATE DEHYDROGENASE | 著者 | Nurachman, Z, Akanuma, S, Sato, T, Oshima, T, Tanaka, N. | 登録日 | 2000-01-06 | 公開日 | 2000-01-19 | 最終更新日 | 2023-08-09 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Crystal structures of 3-isopropylmalate dehydrogenases with mutations at the C-terminus: crystallographic analyses of structure-stability relationships. Protein Eng., 13, 2000
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1DR8
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![BU of 1dr8 by Molmil](/molmil-images/mine/1dr8) | STRUCTURE OF MODIFIED 3-ISOPROPYLMALATE DEHYDROGENASE AT THE C-TERMINUS, HD177 | 分子名称: | 3-ISOPROPYLMALATE DEHYDROGENASE | 著者 | Nurachman, Z, Akanuma, S, Sato, T, Oshima, T, Tanaka, N. | 登録日 | 2000-01-06 | 公開日 | 2000-01-19 | 最終更新日 | 2023-08-09 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Crystal structures of 3-isopropylmalate dehydrogenases with mutations at the C-terminus: crystallographic analyses of structure-stability relationships. Protein Eng., 13, 2000
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6JTC
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![BU of 6jtc by Molmil](/molmil-images/mine/6jtc) | Crystal structure of dipeptidyl peptidase 11 (DPP11) with SH-5 from Porphyromonas gingivalis (Space) | 分子名称: | 2-(2-azanylethylamino)-5-nitro-benzoic acid, Asp/Glu-specific dipeptidyl-peptidase, GLYCEROL | 著者 | Sakamoto, Y, Suzuki, Y, Iizuka, I, Roppongi, S, Kushibiki, C, Nakamura, A, Ogasawara, W, Tanaka, N. | 登録日 | 2019-04-10 | 公開日 | 2019-10-02 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.39 Å) | 主引用文献 | Fragment-based discovery of the first nonpeptidyl inhibitor of an S46 family peptidase. Sci Rep, 9, 2019
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1DPZ
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![BU of 1dpz by Molmil](/molmil-images/mine/1dpz) | STRUCTURE OF MODIFIED 3-ISOPROPYLMALATE DEHYDROGENASE AT THE C-TERMINUS, HD711 | 分子名称: | 3-ISOPROPYLMALATE DEHYDROGENASE | 著者 | Nurachman, Z, Akanuma, S, Sato, T, Oshima, T, Tanaka, N. | 登録日 | 1999-12-29 | 公開日 | 2000-01-12 | 最終更新日 | 2023-08-09 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Crystal structures of 3-isopropylmalate dehydrogenases with mutations at the C-terminus: crystallographic analyses of structure-stability relationships. Protein Eng., 13, 2000
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3VMK
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![BU of 3vmk by Molmil](/molmil-images/mine/3vmk) | 3-isopropylmalate dehydrogenase from Shewanella benthica DB21 MT-2 | 分子名称: | 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CHLORIDE ION, ... | 著者 | Nagae, T, Watanabe, N. | 登録日 | 2011-12-13 | 公開日 | 2012-02-29 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.48 Å) | 主引用文献 | Structural analysis of 3-isopropylmalate dehydrogenase from the obligate piezophile Shewanella benthica DB21MT-2 and the nonpiezophile Shewanella oneidensis MR-1 Acta Crystallogr.,Sect.F, 68, 2012
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3AU8
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![BU of 3au8 by Molmil](/molmil-images/mine/3au8) | Crystal structure of the ternary complex of an isomerase | 分子名称: | 1-deoxy-D-xylulose 5-phosphate reductoisomerase, MANGANESE (II) ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | 著者 | Umeda, T, Tanaka, N, Kusakabe, Y, Nakanishi, M, Kitade, Y, Nakamura, K.T. | 登録日 | 2011-02-01 | 公開日 | 2011-08-10 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.86 Å) | 主引用文献 | Molecular basis of fosmidomycin's action on the human malaria parasite Plasmodium falciparum Sci Rep, 1, 2011
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3AU9
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![BU of 3au9 by Molmil](/molmil-images/mine/3au9) | Crystal structure of the quaternary complex-1 of an isomerase | 分子名称: | 1-deoxy-D-xylulose 5-phosphate reductoisomerase, 3-[FORMYL(HYDROXY)AMINO]PROPYLPHOSPHONIC ACID, CALCIUM ION, ... | 著者 | Umeda, T, Tanaka, N, Kusakabe, Y, Nakanishi, M, Kitade, Y, Nakamura, K.T. | 登録日 | 2011-02-01 | 公開日 | 2011-08-10 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Molecular basis of fosmidomycin's action on the human malaria parasite Plasmodium falciparum Sci Rep, 1, 2011
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3WVH
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![BU of 3wvh by Molmil](/molmil-images/mine/3wvh) | Time-Resolved Crystal Structure of HindIII with 25sec soaking | 分子名称: | DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3'), GLYCEROL, MANGANESE (II) ION, ... | 著者 | Kawamura, T, Kobayashi, T, Watanabe, N. | 登録日 | 2014-05-21 | 公開日 | 2015-04-08 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.54 Å) | 主引用文献 | Analysis of the HindIII-catalyzed reaction by time-resolved crystallography Acta Crystallogr.,Sect.D, 71, 2015
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3WVI
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![BU of 3wvi by Molmil](/molmil-images/mine/3wvi) | Time-Resolved Crystal Structure of HindIII with 40 sec soaking | 分子名称: | DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3'), GLYCEROL, MANGANESE (II) ION, ... | 著者 | Kawamura, T, Kobayashi, T, Watanabe, N. | 登録日 | 2014-05-21 | 公開日 | 2015-04-08 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.55 Å) | 主引用文献 | Analysis of the HindIII-catalyzed reaction by time-resolved crystallography Acta Crystallogr.,Sect.D, 71, 2015
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2D2X
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![BU of 2d2x by Molmil](/molmil-images/mine/2d2x) | Crystal structure of 2-deoxy-scyllo-inosose synthase | 分子名称: | 2-deoxy-scyllo-inosose synthase, COBALT (II) ION, GLYCEROL, ... | 著者 | Nango, E, Kumasaka, T, Tanaka, N, Kakinuma, K, Eguchi, T. | 登録日 | 2005-09-20 | 公開日 | 2006-10-03 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structure of 2-deoxy-scyllo-inosose synthase, a key enzyme in the biosynthesis of 2-deoxystreptamine-containing aminoglycoside antibiotics, in complex with a mechanism-based inhibitor and NAD+ Proteins, 70, 2008
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3VMJ
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![BU of 3vmj by Molmil](/molmil-images/mine/3vmj) | 3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 | 分子名称: | 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CHLORIDE ION, ... | 著者 | Nagae, T, Watanabe, N. | 登録日 | 2011-12-13 | 公開日 | 2012-02-29 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.56 Å) | 主引用文献 | Structural analysis of 3-isopropylmalate dehydrogenase from the obligate piezophile Shewanella benthica DB21MT-2 and the nonpiezophile Shewanella oneidensis MR-1 Acta Crystallogr.,Sect.F, 68, 2012
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3WVP
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![BU of 3wvp by Molmil](/molmil-images/mine/3wvp) | Time-Resolved Crystal Structure of HindIII with 60sec soaking | 分子名称: | DNA (5'-D(*GP*CP*CP*A)-3'), DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3'), DNA (5'-D(P*AP*GP*CP*TP*TP*GP*GP*C)-3'), ... | 著者 | Kawamura, T, Kobayashi, T, Watanabe, N. | 登録日 | 2014-06-02 | 公開日 | 2015-04-08 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Analysis of the HindIII-catalyzed reaction by time-resolved crystallography Acta Crystallogr.,Sect.D, 71, 2015
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5YP2
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![BU of 5yp2 by Molmil](/molmil-images/mine/5yp2) | Crystal structure of dipeptidyl peptidase IV (DPP IV) with DPP4 inhibitor from Pseudoxanthomonas mexicana WO24 | 分子名称: | (2S,5R)-1-[2-[[1-(hydroxymethyl)cyclopentyl]amino]ethanoyl]pyrrolidine-2,5-dicarbonitrile, Dipeptidyl aminopeptidase 4, GLYCEROL | 著者 | Roppongi, S, Suzuki, Y, Tateoka, C, Fuimoto, M, Morisawa, S, Iizuka, I, Nakamura, A, Honma, N, Shida, Y, Ogasawara, W, Tanaka, N, Sakamoto, Y, Nonaka, T. | 登録日 | 2017-11-01 | 公開日 | 2018-02-21 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.13 Å) | 主引用文献 | Crystal structures of a bacterial dipeptidyl peptidase IV reveal a novel substrate recognition mechanism distinct from that of mammalian orthologues. Sci Rep, 8, 2018
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5YP3
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![BU of 5yp3 by Molmil](/molmil-images/mine/5yp3) | Crystal structure of dipeptidyl peptidase IV (DPP IV) with Ile-Pro from Pseudoxanthomonas mexicana | 分子名称: | Dipeptidyl aminopeptidase 4, GLYCEROL, ISOLEUCINE, ... | 著者 | Roppongi, S, Suzuki, Y, Tateoka, C, Fuimoto, M, Morisawa, S, Iizuka, I, Nakamura, A, Honma, N, Shida, Y, Ogasawara, W, Tanaka, N, Sakamoto, Y, Nonaka, T. | 登録日 | 2017-11-01 | 公開日 | 2018-02-21 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.44 Å) | 主引用文献 | Crystal structures of a bacterial dipeptidyl peptidase IV reveal a novel substrate recognition mechanism distinct from that of mammalian orthologues. Sci Rep, 8, 2018
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5Z98
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![BU of 5z98 by Molmil](/molmil-images/mine/5z98) | Crystal Structure of the Primate APOBEC3H Dimer mediated by RNA Duplex | 分子名称: | Apolipoprotein B mRNA editing enzyme catalytic polypeptide-like protein 3H, RNA (5'-R(*AP*UP*AP*CP*CP*CP*GP*GP*CP*A)-3'), RNA (5'-R(P*CP*UP*GP*CP*CP*GP*GP*GP*UP*A)-3'), ... | 著者 | Matsuoka, T, Nagae, T, Ode, H, Watanabe, N, Iwatani, Y. | 登録日 | 2018-02-02 | 公開日 | 2018-08-15 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Structural basis of chimpanzee APOBEC3H dimerization stabilized by double-stranded RNA. Nucleic Acids Res., 46, 2018
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5Z06
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![BU of 5z06 by Molmil](/molmil-images/mine/5z06) | Crystal structure of beta-1,2-glucanase from Parabacteroides distasonis | 分子名称: | BDI_3064 protein, CALCIUM ION, GLYCEROL | 著者 | Shimizu, H, Nakajima, M, Miyanaga, A, Takahashi, Y, Tanaka, N, Kobayashi, K, Sugimoto, N, Nakai, H, Taguchi, H. | 登録日 | 2017-12-18 | 公開日 | 2018-05-30 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Characterization and Structural Analysis of a Novel exo-Type Enzyme Acting on beta-1,2-Glucooligosaccharides from Parabacteroides distasonis Biochemistry, 57, 2018
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3WOR
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![BU of 3wor by Molmil](/molmil-images/mine/3wor) | Crystal structure of the DAP BII octapeptide complex | 分子名称: | Angiotensin II, GLYCEROL, ZINC ION, ... | 著者 | Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N. | 登録日 | 2013-12-29 | 公開日 | 2014-09-03 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | S46 peptidases are the first exopeptidases to be members of clan PA SCI REP, 4, 2014
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3WOP
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![BU of 3wop by Molmil](/molmil-images/mine/3wop) | Crystal structure of the DAP BII hexapeptide complex II | 分子名称: | Angiotensin IV, GLYCEROL, ZINC ION, ... | 著者 | Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N. | 登録日 | 2013-12-29 | 公開日 | 2014-09-03 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | 主引用文献 | S46 peptidases are the first exopeptidases to be members of clan PA SCI REP, 4, 2014
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3WOQ
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![BU of 3woq by Molmil](/molmil-images/mine/3woq) | Crystal structure of the DAP BII hexapeptide complex III | 分子名称: | Angiotensin IV, GLYCEROL, ZINC ION, ... | 著者 | Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N. | 登録日 | 2013-12-29 | 公開日 | 2014-09-03 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.82 Å) | 主引用文献 | S46 peptidases are the first exopeptidases to be members of clan PA SCI REP, 4, 2014
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3WON
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![BU of 3won by Molmil](/molmil-images/mine/3won) | Crystal structure of the DAP BII dipeptide complex III | 分子名称: | GLYCEROL, TYROSINE, VALINE, ... | 著者 | Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N. | 登録日 | 2013-12-29 | 公開日 | 2014-09-03 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.75 Å) | 主引用文献 | S46 peptidases are the first exopeptidases to be members of clan PA SCI REP, 4, 2014
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3WOL
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![BU of 3wol by Molmil](/molmil-images/mine/3wol) | Crystal structure of the DAP BII dipeptide complex I | 分子名称: | GLYCEROL, TYROSINE, VALINE, ... | 著者 | Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N. | 登録日 | 2013-12-29 | 公開日 | 2014-09-03 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.74 Å) | 主引用文献 | S46 peptidases are the first exopeptidases to be members of clan PA SCI REP, 4, 2014
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