Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1033 results

3VUP
DownloadVisualize
BU of 3vup by Molmil
Beta-1,4-mannanase from the common sea hare Aplysia kurodai
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-1,4-mannanase, SULFATE ION
Authors:Mizutani, K, Tsuchiya, S, Toyoda, M, Nanbu, Y, Tominaga, K, Yuasa, K, Takahashi, N, Tsuji, A, Mikami, B.
Deposit date:2012-07-04
Release date:2012-10-17
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Structure of beta-1,4-mannanase from the common sea hare Aplysia kurodai at 1.05 A resolution.
Acta Crystallogr.,Sect.F, 68, 2012
7E3Y
DownloadVisualize
BU of 7e3y by Molmil
Crystal structure of serine acetyltransferase from Salmonella typhimurium complexed with cysteine
Descriptor: CYSTEINE, Serine acetyltransferase
Authors:Momitani, K, Shiba, T, Sawa, T, Ono, K, Hurukawa, S.
Deposit date:2021-02-09
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of serine acetyltransferase from Salmonella typhimurium
To Be Published
1J1Q
DownloadVisualize
BU of 1j1q by Molmil
Structure of Pokeweed Antiviral Protein from Seeds (PAP-S1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antiviral protein S
Authors:Watanabe, K, Sato, E, Honjo, E, Motoshima, H, Kurokawa, H, Mikami, B, Monzingo, A.F, Robertus, J.D, Fujii, H, Hidaka, A.
Deposit date:2002-12-14
Release date:2004-02-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Pokweed Antiviral Protein from Seeds (PAP-S1) at 1.8 Angstrom Resolution
To be published
1IEJ
DownloadVisualize
BU of 1iej by Molmil
OVOTRANSFERRIN, N-TERMINAL LOBE, HOLO FORM, AT 1.65 A RESOLUTION
Descriptor: CARBONATE ION, FE (III) ION, OVOTRANSFERRIN
Authors:Mizutani, K, Mikami, B, Hirose, M.
Deposit date:2001-04-10
Release date:2001-06-20
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Domain closure mechanism in transferrins: new viewpoints about the hinge structure and motion as deduced from high resolution crystal structures of ovotransferrin N-lobe.
J.Mol.Biol., 309, 2001
1J1M
DownloadVisualize
BU of 1j1m by Molmil
Ricin A-Chain (Recombinant) at 100K
Descriptor: Ricin, SULFATE ION, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
Authors:Watanabe, K, Motoshima, H.
Deposit date:2002-12-10
Release date:2004-02-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Ricin A-Chain (Recombinant) at 100K
To be published
2D3I
DownloadVisualize
BU of 2d3i by Molmil
Crystal Structure of Aluminum-Bound Ovotransferrin at 2.15 Angstrom Resolution
Descriptor: ALUMINUM ION, BICARBONATE ION, Ovotransferrin
Authors:Mizutani, K, Mikami, B, Aibara, S, Hirose, M.
Deposit date:2005-09-28
Release date:2005-11-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of aluminium-bound ovotransferrin at 2.15 Angstroms resolution.
Acta Crystallogr.,Sect.D, 61, 2005
2E1E
DownloadVisualize
BU of 2e1e by Molmil
Crystal structure of the HRDC Domain of Human Werner Syndrome Protein, WRN
Descriptor: CHLORIDE ION, Werner syndrome ATP-dependent helicase
Authors:Kitano, K, Yoshihara, N, Hakoshima, T.
Deposit date:2006-10-25
Release date:2006-12-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the HRDC domain of human Werner syndrome protein, WRN
J.Biol.Chem., 282, 2007
2D2Q
DownloadVisualize
BU of 2d2q by Molmil
Crystal structure of the dimerized radixin FERM domain
Descriptor: Radixin
Authors:Kitano, K, Yusa, F, Hakoshima, T.
Deposit date:2005-09-15
Release date:2006-04-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of dimerized radixin FERM domain suggests a novel masking motif in C-terminal residues 295-304
ACTA CRYSTALLOGR.,SECT.F, 62, 2006
2E1F
DownloadVisualize
BU of 2e1f by Molmil
Crystal structure of the HRDC Domain of Human Werner Syndrome Protein, WRN
Descriptor: CHLORIDE ION, Werner syndrome ATP-dependent helicase
Authors:Kitano, K, Yoshihara, N, Hakoshima, T.
Deposit date:2006-10-25
Release date:2006-12-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the HRDC domain of human Werner syndrome protein, WRN
J.Biol.Chem., 282, 2007
3AAF
DownloadVisualize
BU of 3aaf by Molmil
Structure of WRN RQC domain bound to double-stranded DNA
Descriptor: ACETATE ION, DNA (5'-D(*AP*CP*CP*CP*TP*AP*AP*TP*TP*AP*GP*GP*GP*T)-3'), Werner syndrome ATP-dependent helicase
Authors:Kitano, K, Hakoshima, T.
Deposit date:2009-11-16
Release date:2010-02-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for DNA strand separation by the unconventional winged-helix domain of RecQ helicase WRN
Structure, 18, 2010
3VM5
DownloadVisualize
BU of 3vm5 by Molmil
Recombinant medaka fish alpha-amylase expressed in yeast Pichia pastoris
Descriptor: CALCIUM ION, CHLORIDE ION, alpha-amylase
Authors:Mizutani, K, Toyoda, M, Mikami, B.
Deposit date:2011-12-08
Release date:2012-06-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural and functional characterization of recombinant medaka fish alpha-amylase expressed in yeast Pichia pastoris.
Biochim.Biophys.Acta, 1824, 2012
7EQD
DownloadVisualize
BU of 7eqd by Molmil
STRUCTURE OF PHOTOSYNTHETIC LH1-RC SUPER-COMPLEX OF RHODOSPIRILLUM RUBRUM
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, 2-azanyl-5-[(2~{E},6~{E},8~{E},10~{E},12~{E},14~{E},18~{E},22~{E},26~{E},30~{E},34~{E})-3,7,11,15,19,23,27,31,35,39-decamethyltetraconta-2,6,8,10,12,14,18,22,26,30,34,38-dodecaenyl]-3-methoxy-6-methyl-cyclohexa-2,5-diene-1,4-dione, CARDIOLIPIN, ...
Authors:Tani, K, Kanno, R, Ji, X.-C, Yu, L.-J, Hall, M, Kimura, Y, Madigan, M.T, Mizoguchi, A, Humbel, B.M, Wang-Otomo, Z.-Y.
Deposit date:2021-05-01
Release date:2021-08-18
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Cryo-EM Structure of the Photosynthetic LH1-RC Complex from Rhodospirillum rubrum .
Biochemistry, 2021
7F0L
DownloadVisualize
BU of 7f0l by Molmil
STRUCTURE OF PHOTOSYNTHETIC LH1-RC SUPER-COMPLEX OF RHODOBACTER SPHAEROIDES MONOMER
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, Antenna pigment protein beta chain, BACTERIOCHLOROPHYLL A, ...
Authors:Tani, K, Nagashima, V.P, Kanno, R, Kawamura, S, Kikuchi, R, Ji, X.-C, Hall, M, Yu, L.-J, Kimura, Y, Madigan, M.T, Mizoguchi, A, Humbel, B.M, Wang-Otomo, Z.-Y.
Deposit date:2021-06-05
Release date:2021-11-10
Last modified:2021-11-17
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:A previously unrecognized membrane protein in the Rhodobacter sphaeroides LH1-RC photocomplex.
Nat Commun, 12, 2021
7C9R
DownloadVisualize
BU of 7c9r by Molmil
STRUCTURE OF PHOTOSYNTHETIC LH1-RC SUPER-COMPLEX OF THIORHODOVIBRIO STRAIN 970
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (6~{E},8~{E},10~{E},12~{E},14~{E},16~{E},18~{E},20~{E},22~{E},24~{E},26~{E})-2,31-dimethoxy-2,6,10,14,19,23,27,31-octamethyl-dotriaconta-6,8,10,12,14,16,18,20,22,24,26-undecaene, Alpha subunit 1 of light-harvesting 1 complex, ...
Authors:Tani, K, Kanno, R, Makino, Y, Hall, M, Takenouchi, M, Imanishi, M, Yu, L.-J, Overmann, J, Madigan, M.T, Kimura, Y, Mizoguchi, A, Humbel, B.M, Wang-Otomo, Z.-Y.
Deposit date:2020-06-07
Release date:2020-10-07
Last modified:2020-10-14
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:Cryo-EM structure of a Ca 2+ -bound photosynthetic LH1-RC complex containing multiple alpha beta-polypeptides.
Nat Commun, 11, 2020
4FC9
DownloadVisualize
BU of 4fc9 by Molmil
Structure of the C-terminal domain of the type III effector Xcv3220 (XopL)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, uncharacterized protein
Authors:Singer, A.U, Xu, X, Cui, H, Tan, K, Joachimiak, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-05-24
Release date:2012-06-13
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the C-terminal domain of the type III effector Xcv3220 (XopL)
To be Published
7RGN
DownloadVisualize
BU of 7rgn by Molmil
Crystal structure of putative fructose-1,6-bisphosphate aldolase from Candida auris
Descriptor: Fructose-bisphosphate aldolase, GLYCEROL, ISOPROPYL ALCOHOL, ...
Authors:Stogios, P.J, Evdokimova, E, Tan, K, Di Leo, R, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-07-15
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of putative fructose-1,6-bisphosphate aldolase from Candida auris
To Be Published
7REU
DownloadVisualize
BU of 7reu by Molmil
Crystal structure of Aro4p, 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase from Candida auris, L-Tyr complex
Descriptor: 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase, CHLORIDE ION, GLYCEROL, ...
Authors:Stogios, P.J, Evdokimova, E, Tan, K, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-07-13
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Crystal structure of Aro4p, 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase from Candida auris, L-Tyr complex
To Be Published
7RJ1
DownloadVisualize
BU of 7rj1 by Molmil
Crystal structure of Aro7p chorismate mutase from Candida albicans, complex with L-Trp
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Chorismate mutase, ...
Authors:Stogios, P.J, Evdokimova, E, Tan, K, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-07-20
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of Aro7p chorismate mutase from Candida albicans, complex with L-Trp
To Be Published
4UX1
DownloadVisualize
BU of 4ux1 by Molmil
Cryo-EM structure of antagonist-bound E2P gastric H,K-ATPase (SCH.E2. AlF)
Descriptor: POTASSIUM-TRANSPORTING ATPASE ALPHA CHAIN 1, POTASSIUM-TRANSPORTING ATPASE SUBUNIT BETA
Authors:Abe, K, Tani, K, Fujiyoshi, Y.
Deposit date:2014-08-18
Release date:2014-09-17
Last modified:2014-11-12
Method:ELECTRON CRYSTALLOGRAPHY (8 Å)
Cite:Systematic Comparison of Molecular Conformations of H+,K+-ATPase Reveals an Important Contribution of the A-M2 Linker for the Luminal Gating.
J.Biol.Chem., 289, 2014
1D9K
DownloadVisualize
BU of 1d9k by Molmil
CRYSTAL STRUCTURE OF COMPLEX BETWEEN D10 TCR AND PMHC I-AK/CA
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, CONALBUMIN PEPTIDE, ...
Authors:Reinherz, E.L, Tan, K, Tang, L, Kern, P, Liu, J.-H, Xiong, Y, Hussey, R.E, Smolyar, A, Hare, B, Zhang, R, Joachimiak, A, Chang, H.-C, Wagner, G, Wang, J.-H.
Deposit date:1999-10-28
Release date:1999-12-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The crystal structure of a T cell receptor in complex with peptide and MHC class II.
Science, 286, 1999
5CSU
DownloadVisualize
BU of 5csu by Molmil
Disproportionating enzyme 1 from Arabidopsis - acarviostatin soak
Descriptor: 1,2-ETHANEDIOL, 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic, ...
Authors:O'Neill, E.C, Stevenson, C.E.M, Tantanarat, K, Latousakis, D, Donaldson, M.I, Rejzek, M, Limpaseni, T, Smith, A.M, Field, R.A, Lawson, D.M.
Deposit date:2015-07-23
Release date:2015-11-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Structural Dissection of the Maltodextrin Disproportionation Cycle of the Arabidopsis Plastidial Disproportionating Enzyme 1 (DPE1).
J.Biol.Chem., 290, 2015
4XQ2
DownloadVisualize
BU of 4xq2 by Molmil
Ensemble refinement of cystathione gamma lyase (CalE6) D7G from Micromonospora echinospora
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, CalE6, ...
Authors:Wang, F, Yennamalli, R.M, Singh, S, Tan, K, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-01-18
Release date:2015-04-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of cystathione gamma lyase (CalE6) from Micromonospora echinospora
To Be Published
4YE5
DownloadVisualize
BU of 4ye5 by Molmil
The crystal structure of a peptidoglycan synthetase from Bifidobacterium adolescentis ATCC 15703
Descriptor: ACETATE ION, GLYCEROL, Peptidoglycan synthetase penicillin-binding protein 3
Authors:Cuff, M, Tan, K, Joachimiak, G, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2015-02-23
Release date:2015-03-18
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.052 Å)
Cite:The crystal structure of a peptidoglycan synthetase from Bifidobacterium adolescentis ATCC 15703
To Be Published
1MBQ
DownloadVisualize
BU of 1mbq by Molmil
Anionic Trypsin from Pacific Chum Salmon
Descriptor: BENZAMIDINE, CALCIUM ION, Trypsin
Authors:Toyota, E, Ng, K.K.S, Kuninaga, S, Sekizaki, H, Itoh, K, Tanizawa, K, James, M.N.G.
Deposit date:2002-08-03
Release date:2002-12-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure and Nucleotide Sequence of an Anionic Trypsin from Chum Salmon (Oncorhynchus keta) in Comparison with Atlantic Salmon (Salmo salar) and Bovine Trypsin
J.Mol.Biol., 324, 2002
3KDQ
DownloadVisualize
BU of 3kdq by Molmil
Crystal structure of a functionally unknown conserved protein from Corynebacterium diphtheriae.
Descriptor: uncharacterized conserved protein
Authors:Zhang, R, Wu, R, Tan, K, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-10-23
Release date:2009-11-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of a functionally unknown conserved protein from Corynebacterium diphtheriae.
To be Published

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon