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PDB: 14 results

2L5H
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Solution Structure of the H189Q mutant of the Enzyme I dimer Using Residual Dipolar Couplings and Small Angle X-Ray Scattering
Descriptor: Phosphoenolpyruvate-protein phosphotransferase
Authors:Takayama, Y.D, Schwieters, C.D, Grishaev, A, Guirlando, R, Clore, G.
Deposit date:2010-11-01
Release date:2011-01-12
Last modified:2024-05-01
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Combined Use of Residual Dipolar Couplings and Solution X-ray Scattering To Rapidly Probe Rigid-Body Conformational Transitions in a Non-phosphorylatable Active-Site Mutant of the 128 kDa Enzyme I Dimer.
J.Am.Chem.Soc., 133, 2011
3AW6
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Crystal structure of tetragonal hen egg white lysozyme at 84.2% relative humidity
Descriptor: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
Authors:Takayama, Y, Nakasako, M.
Deposit date:2011-03-11
Release date:2011-03-30
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A few low-frequency normal modes predominantly contribute to conformational responses of hen egg white lysozyme in the tetragonal crystal to variations of molecular packing controlled by environmental humidity
Biophys.Chem., 159, 2011
3AW7
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Crystal structure of tetragonal hen egg white lysozyme at 71.9% relative humidity
Descriptor: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
Authors:Takayama, Y, Nakasako, M.
Deposit date:2011-03-11
Release date:2011-03-30
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A few low-frequency normal modes predominantly contribute to conformational responses of hen egg white lysozyme in the tetragonal crystal to variations of molecular packing controlled by environmental humidity
Biophys.Chem., 159, 2011
2CVC
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BU of 2cvc by Molmil
Crystal structure of High-Molecular Weight Cytochrome c from Desulfovibrio vulgaris (Hildenborough)
Descriptor: HEME C, High-molecular-weight cytochrome c precursor
Authors:Suto, K, Sato, M, Shibata, N, Kitamura, M, Morimoto, Y, Takayama, Y, Ozawa, K, Akutsu, H, Higuchi, Y, Yasuoka, N.
Deposit date:2005-06-02
Release date:2006-06-06
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of High-Molecular Weight Cytochrome c
To be Published
2DGE
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BU of 2dge by Molmil
Crystal structure of oxidized cytochrome C6A from Arabidopsis thaliana
Descriptor: Cytochrome c6, PROTOPORPHYRIN IX CONTAINING FE, ZINC ION
Authors:Chida, H, Yokoyama, T, Kawai, F, Nakazawa, A, Akazaki, H, Takayama, Y, Hirano, T, Suruga, K, Satoh, T, Yamada, S, Kawachi, R, Unzai, S, Nishio, T, Park, S.-Y, Oku, T.
Deposit date:2006-03-11
Release date:2006-07-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of oxidized cytochrome c(6A) from Arabidopsis thaliana
Febs Lett., 580, 2006
2LOE
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BU of 2loe by Molmil
Structure of the Plasmodium 6-cysteine s48/45 Domain
Descriptor: 6-cysteine protein, putative
Authors:Cai, M, Arredondo, S.A, Clore, M.G, Miller, L.H, Takayama, Y, Macdonald, N.J, Enderson, E.D, Aravind, L.
Deposit date:2012-01-23
Release date:2012-04-18
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Structure of the Plasmodium 6-cysteine s48/45 domain.
Proc.Natl.Acad.Sci.USA, 109, 2012
2KX9
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Solution Structure of the Enzyme I dimer Using Residual Dipolar Couplings and Small Angle X-Ray Scattering
Descriptor: Phosphoenolpyruvate-protein phosphotransferase
Authors:Schwieters, C.D, Suh, J, Grishaev, A, Takayama, Y, Guirlando, R, Clore, G.
Deposit date:2010-04-29
Release date:2010-09-15
Last modified:2024-05-01
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Solution structure of the 128 kDa enzyme I dimer from Escherichia coli and its 146 kDa complex with HPr using residual dipolar couplings and small- and wide-angle X-ray scattering.
J.Am.Chem.Soc., 132, 2010
8Z56
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Crystal structure of human Q140L-SIRT5 in complex with succinylated Prx1 fragment
Descriptor: CHLORIDE ION, GLYCEROL, NAD-dependent protein deacylase sirtuin-5, ...
Authors:Yokoyama, T, Takayama, Y.
Deposit date:2024-04-18
Release date:2024-10-09
Method:X-RAY DIFFRACTION (1.806 Å)
Cite:SIRT5 mutants reveal the role of conserved asparagine and glutamine residues in the NAD + -binding pocket.
Febs Lett., 598, 2024
8Z55
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Crystal structure of human SIRT5 in complex with succPrx1 and ADP ribose
Descriptor: ADENOSINE-5'-DIPHOSPHATE, NAD-dependent protein deacylase sirtuin-5, mitochondrial, ...
Authors:Yokoyama, T, Takayama, Y.
Deposit date:2024-04-18
Release date:2024-10-09
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:SIRT5 mutants reveal the role of conserved asparagine and glutamine residues in the NAD + -binding pocket.
Febs Lett., 598, 2024
8Z54
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Crystal structure of human SIRT5 in complex with succinylated Prx1 fragment
Descriptor: DIMETHYL SULFOXIDE, NAD-dependent protein deacylase sirtuin-5, mitochondrial, ...
Authors:Yokoyama, T, Takayama, Y.
Deposit date:2024-04-18
Release date:2024-10-09
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:SIRT5 mutants reveal the role of conserved asparagine and glutamine residues in the NAD + -binding pocket.
Febs Lett., 598, 2024
8Z58
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BU of 8z58 by Molmil
Crystal structure of human N141V-SIRT5 in complex with succinylated Prx1 fragment
Descriptor: CHLORIDE ION, NAD-dependent protein deacylase sirtuin-5, mitochondrial, ...
Authors:Yokoyama, T, Takayama, Y.
Deposit date:2024-04-18
Release date:2024-10-09
Method:X-RAY DIFFRACTION (2.405 Å)
Cite:SIRT5 mutants reveal the role of conserved asparagine and glutamine residues in the NAD + -binding pocket.
Febs Lett., 598, 2024
8Z57
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BU of 8z57 by Molmil
Crystal structure of human Q140L-SIRT5 in complex with succinylated Prx1 fragment and ADP ribose
Descriptor: ADENOSINE-5'-DIPHOSPHATE, NAD-dependent protein deacylase sirtuin-5, mitochondrial, ...
Authors:Yokoyama, T, Takayama, Y.
Deposit date:2024-04-18
Release date:2024-10-09
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:SIRT5 mutants reveal the role of conserved asparagine and glutamine residues in the NAD + -binding pocket.
Febs Lett., 598, 2024
1K9A
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BU of 1k9a by Molmil
Crystal structure analysis of full-length carboxyl-terminal Src kinase at 2.5 A resolution
Descriptor: Carboxyl-terminal Src kinase
Authors:Ogawa, A, Takayama, Y, Nagata, A, Chong, K.T, Takeuchi, S, Sakai, H, Nakagawa, A, Nada, S, Okada, M, Tsukihara, T.
Deposit date:2001-10-28
Release date:2002-03-20
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the carboxyl-terminal Src kinase, Csk.
J.Biol.Chem., 277, 2002
2XDF
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BU of 2xdf by Molmil
Solution Structure of the Enzyme I Dimer Complexed with HPr Using Residual Dipolar Couplings and Small Angle X-Ray Scattering
Descriptor: PHOSPHOCARRIER PROTEIN HPR, PHOSPHOENOLPYRUVATE-PROTEIN PHOSPHOTRANSFERASE
Authors:Schwieters, C.D, Suh, J.-Y, Grishaev, A, Guirlando, R, Takayama, Y, Clore, G.M.
Deposit date:2010-04-30
Release date:2010-09-22
Last modified:2024-05-15
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Solution Structure of the 128 kDa Enzyme I Dimer from Escherichia Coli and its 146 kDa Complex with Hpr Using Residual Dipolar Couplings and Small- and Wide-Angle X-Ray Scattering.
J.Am.Chem.Soc., 132, 2010

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PDB entries from 2024-11-20

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