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PDB: 426 results

1WWJ
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crystal structure of KaiB from Synechocystis sp.
Descriptor: Circadian clock protein kaiB, D-MALATE, IMIDAZOLE, ...
Authors:Hitomi, K, Oyama, T, Han, S, Arvai, A.S, Tainer, J.A, Getzoff, E.D.
Deposit date:2005-01-06
Release date:2005-02-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Tetrameric architecture of the circadian clock protein KaiB. A novel interface for intermolecular interactions and its impact on the circadian rhythm.
J.Biol.Chem., 280, 2005
6SJD
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ZC3H12B-ribonuclease domain bound to RNA
Descriptor: CACODYLATE ION, MAGNESIUM ION, Probable ribonuclease ZC3H12B, ...
Authors:Morgunova, E, Bourenkov, G, Taipale, J.
Deposit date:2019-08-13
Release date:2020-07-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:Binding specificities of human RNA-binding proteins toward structured and linear RNA sequences.
Genome Res., 30, 2020
1IN7
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THERMOTOGA MARITIMA RUVB R170A
Descriptor: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, HOLLIDAY JUNCTION DNA HELICASE RUVB
Authors:Putnam, C.D, Clancy, S.B, Tsuruta, H, Wetmur, J.G, Tainer, J.A.
Deposit date:2001-05-12
Release date:2001-08-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and mechanism of the RuvB Holliday junction branch migration motor.
J.Mol.Biol., 311, 2001
1IN6
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THERMOTOGA MARITIMA RUVB K64R MUTANT
Descriptor: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, COBALT (II) ION, ...
Authors:Putnam, C.D, Clancy, S.B, Tsuruta, H, Wetmur, J.G, Tainer, J.A.
Deposit date:2001-05-12
Release date:2001-08-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and mechanism of the RuvB Holliday junction branch migration motor.
J.Mol.Biol., 311, 2001
1IN5
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THERMOGOTA MARITIMA RUVB A156S MUTANT
Descriptor: ADENOSINE-5'-DIPHOSPHATE, HOLLIDAY JUNCTION DNA HELICASE RUVB
Authors:Putnam, C.D, Clancy, S.B, Tsuruta, H, Gonzalez, S, Wetmur, J.G, Tainer, J.A.
Deposit date:2001-05-12
Release date:2001-08-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and mechanism of the RuvB Holliday junction branch migration motor.
J.Mol.Biol., 311, 2001
1II7
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Crystal structure of P. furiosus Mre11 with manganese and dAMP
Descriptor: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, MANGANESE (II) ION, Mre11 nuclease, ...
Authors:Hopfner, K.-P, Karcher, A, Craig, L, Woo, T.T, Carney, J.P, Tainer, J.A.
Deposit date:2001-04-20
Release date:2001-05-30
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural biochemistry and interaction architecture of the DNA double-strand break repair Mre11 nuclease and Rad50-ATPase.
Cell(Cambridge,Mass.), 105, 2001
1JA8
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Kinetic Analysis of Product Inhibition in Human Manganese Superoxide Dismutase
Descriptor: MANGANESE (II) ION, Manganese Superoxide Dismutase, SULFATE ION
Authors:Hearn, A.S, Stroupe, M.E, Cabelli, D.E, Lepock, J.R, Tainer, J.A, Nick, H.S, Silverman, D.S.
Deposit date:2001-05-29
Release date:2001-06-06
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Kinetic analysis of product inhibition in human manganese superoxide dismutase.
Biochemistry, 40, 2001
1JWK
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Murine Inducible Nitric Oxide Synthase Oxygenase Dimer (Delta 65) with W457A Mutation at Tetrahydrobiopterin Binding Site
Descriptor: 1,2-ETHANEDIOL, 7,8-DIHYDROBIOPTERIN, GLYCEROL, ...
Authors:Aoyagi, M, Arvai, A.S, Ghosh, S, Stuehr, D.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2001-09-04
Release date:2001-10-31
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of tetrahydrobiopterin binding-site mutants of inducible nitric oxide synthase oxygenase dimer and implicated roles of Trp457.
Biochemistry, 40, 2001
1AV8
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RIBONUCLEOTIDE REDUCTASE R2 SUBUNIT FROM E. COLI
Descriptor: MU-OXO-DIIRON, RIBONUCLEOTIDE REDUCTASE R2
Authors:Han, S, Arvai, A, Tainer, J.A.
Deposit date:1997-09-30
Release date:1998-10-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Characterization of Y122F R2 of Escherichia coli ribonucleotide reductase by time-resolved physical biochemical methods and X-ray crystallography.
Biochemistry, 37, 1998
1KEA
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STRUCTURE OF A THERMOSTABLE THYMINE-DNA GLYCOSYLASE
Descriptor: ACETATE ION, CHLORIDE ION, IRON/SULFUR CLUSTER, ...
Authors:Mol, C.D, Arvai, A.S, Begley, T.J, Cunningham, R.P, Tainer, J.A.
Deposit date:2001-11-14
Release date:2002-01-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and activity of a thermostable thymine-DNA glycosylase: evidence for base twisting to remove mismatched normal DNA bases.
J.Mol.Biol., 315, 2002
1KYR
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Crystal Structure of a Cu-bound Green Fluorescent Protein Zn Biosensor
Descriptor: COPPER (II) ION, Green Fluorescent Protein, MAGNESIUM ION
Authors:Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2002-02-05
Release date:2002-04-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural chemistry of a green fluorescent protein Zn biosensor.
J.Am.Chem.Soc., 124, 2002
1KYS
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Crystal Structure of a Zn-bound Green Fluorescent Protein Biosensor
Descriptor: Green Fluorescent Protein, ZINC ION
Authors:Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2002-02-05
Release date:2002-04-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Structural chemistry of a green fluorescent protein Zn biosensor.
J.Am.Chem.Soc., 124, 2002
1AP5
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TYR34->PHE MUTANT OF HUMAN MITOCHONDRIAL MANGANESE SUPEROXIDE DISMUTASE
Descriptor: MANGANESE (II) ION, MANGANESE SUPEROXIDE DISMUTASE
Authors:Guan, Y, Borgstahl, G.E.O, Tainer, J.A.
Deposit date:1997-07-24
Release date:1998-01-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of Y34F mutant human mitochondrial manganese superoxide dismutase and the functional role of tyrosine 34.
Biochemistry, 37, 1998
1T6Q
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Nickel Superoxide Dismutase (NiSOD) CN-treated Apo Structure
Descriptor: Superoxide dismutase [Ni]
Authors:Barondeau, D.P, Kassmann, C.J, Bruns, C.K, Tainer, J.A, Getzoff, E.D.
Deposit date:2004-05-07
Release date:2004-07-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Nickel superoxide dismutase structure and mechanism.
Biochemistry, 43, 2004
1T6I
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Nickel Superoxide Dismutase (NiSOD) Apo Structure
Descriptor: Superoxide dismutase [Ni]
Authors:Barondeau, D.P, Kassmann, C.J, Bruns, C.K, Tainer, J.A, Getzoff, E.D.
Deposit date:2004-05-06
Release date:2004-07-13
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Nickel superoxide dismutase structure and mechanism.
Biochemistry, 43, 2004
1KYP
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Crystal Structure of an Apo Green Fluorescent Protein Zn Biosensor
Descriptor: Green Fluorescent Protein, MAGNESIUM ION
Authors:Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2002-02-05
Release date:2002-04-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural chemistry of a green fluorescent protein Zn biosensor.
J.Am.Chem.Soc., 124, 2002
1DGB
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HUMAN ERYTHROCYTE CATALASE
Descriptor: CATALASE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Putnam, C.D, Arvai, A.S, Bourne, Y, Tainer, J.A.
Deposit date:1999-11-23
Release date:2000-02-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Active and inhibited human catalase structures: ligand and NADPH binding and catalytic mechanism.
J.Mol.Biol., 296, 2000
1US8
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The Rad50 signature motif: essential to ATP binding and biological function
Descriptor: DNA DOUBLE-STRAND BREAK REPAIR RAD50 ATPASE
Authors:Moncalian, G, Lengsfeld, B, Bhaskara, V, Hopfner, K.P, Karcher, A, Alden, E, Tainer, J.A, Paull, T.T.
Deposit date:2003-11-20
Release date:2003-11-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Rad50 Signature Motif: Essential to ATP Binding and Biological Function
J.Mol.Biol., 335, 2004
1T38
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HUMAN O6-ALKYLGUANINE-DNA ALKYLTRANSFERASE BOUND TO DNA CONTAINING O6-METHYLGUANINE
Descriptor: 5'-D(*GP*CP*CP*AP*TP*GP*(6OG)P*CP*TP*AP*GP*TP*A)-3', 5'-D(*TP*AP*CP*TP*AP*GP*CP*CP*AP*TP*GP*GP*C)-3', Methylated-DNA--protein-cysteine methyltransferase
Authors:Daniels, D.S, Woo, T.T, Luu, K.X, Noll, D.M, Clarke, N.D, Pegg, A.E, Tainer, J.A.
Deposit date:2004-04-25
Release date:2004-07-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:DNA binding and nucleotide flipping by the human DNA repair protein AGT.
Nat.Struct.Mol.Biol., 11, 2004
1JWJ
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Murine Inducible Nitric Oxide Synthase Oxygenase Dimer (Delta 65) with W457F Mutation at Tetrahydrobiopterin Binding Site
Descriptor: 1,2-ETHANEDIOL, 5,6,7,8-TETRAHYDROBIOPTERIN, GLYCEROL, ...
Authors:Aoyagi, M, Arvai, A.S, Ghosh, S, Stuehr, D.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2001-09-04
Release date:2001-10-31
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of tetrahydrobiopterin binding-site mutants of inducible nitric oxide synthase oxygenase dimer and implicated roles of Trp457.
Biochemistry, 40, 2001
1AP6
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TYR34->PHE MUTANT OF HUMAN MITOCHONDRIAL MANGANESE SUPEROXIDE DISMUTASE
Descriptor: MANGANESE (II) ION, MANGANESE SUPEROXIDE DISMUTASE
Authors:Guan, Y, Tainer, J.A.
Deposit date:1997-07-24
Release date:1998-01-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of Y34F mutant human mitochondrial manganese superoxide dismutase and the functional role of tyrosine 34.
Biochemistry, 37, 1998
1ZGP
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Crystal Structure of the Discosoma Red Fluorescent Protein (DsRed) Variant K70M
Descriptor: Red fluorescent protein drFP583
Authors:Tubbs, J.L, Tainer, J.A, Getzoff, E.D.
Deposit date:2005-04-21
Release date:2005-08-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic structures of discosoma red fluorescent protein with immature and mature chromophores: linking Peptide bond trans-cis isomerization and acylimine formation in chromophore maturation.
Biochemistry, 44, 2005
1J7K
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THERMOTOGA MARITIMA RUVB P216G MUTANT
Descriptor: ACETATE ION, ADENOSINE-5'-TRIPHOSPHATE, COBALT (II) ION, ...
Authors:Putnam, C.D, Clancy, S.B, Tsuruta, H, Wetmur, J.G, Tainer, J.A.
Deposit date:2001-05-16
Release date:2001-08-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and mechanism of the RuvB Holliday junction branch migration motor.
J.Mol.Biol., 311, 2001
1ZGO
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High Resolution Crystal Structure of the Discosoma Red Fluorescent Protein (DsRed)
Descriptor: Red fluorescent protein drFP583
Authors:Tubbs, J.L, Tainer, J.A, Getzoff, E.D.
Deposit date:2005-04-21
Release date:2005-08-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystallographic structures of discosoma red fluorescent protein with immature and mature chromophores: linking Peptide bond trans-cis isomerization and acylimine formation in chromophore maturation.
Biochemistry, 44, 2005
1DGF
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HUMAN ERYTHROCYTE CATALASE
Descriptor: ACETATE ION, CATALASE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Putnam, C.D, Arvai, A.S, Bourne, Y, Tainer, J.A.
Deposit date:1999-11-24
Release date:2000-02-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Active and inhibited human catalase structures: ligand and NADPH binding and catalytic mechanism.
J.Mol.Biol., 296, 2000

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