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PDB: 906 件

2JYJ
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Re-refining the tetraloop-receptor RNA-RNA complex using NMR-derived restraints and Xplor-nih (2.18)
分子名称: RNA (43-MER)
著者Zuo, X, Wang, J, Foster, T.R, Schwieters, C.D, Tiede, D.M, Butcher, S.E, Wang, Y.
登録日2007-12-13
公開日2008-10-07
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献RNA helical packing in solution: NMR structure of a 30 kDa GAAA tetraloop-receptor complex.
J.Mol.Biol., 351, 2005
5BZ4
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BU of 5bz4 by Molmil
Crystal structure of a T1-like thiolase (CoA-complex) from Mycobacterium smegmatis
分子名称: Beta-ketothiolase, COENZYME A
著者Janardan, N, Harijan, R.K, Kiema, T.R, Wierenga, R.K, Murthy, M.R.N.
登録日2015-06-11
公開日2016-05-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Structural characterization of a mitochondrial 3-ketoacyl-CoA (T1)-like thiolase from Mycobacterium smegmatis
Acta Crystallogr.,Sect.D, 71, 2015
2J8T
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Human aldose reductase in complex with NADP and citrate at 0.82 angstrom
分子名称: ALDO-KETO REDUCTASE FAMILY 1, MEMBER B1, CITRATE ANION, ...
著者Biadene, M, Hazemann, I, Cousido, A, Ginell, S, Sheldrick, G.M, Podjarny, A, Schneider, T.R.
登録日2006-10-27
公開日2007-05-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (0.82 Å)
主引用文献The Atomic Resolution Structure of Human Aldose Reductase Reveals that Rearrangement of a Bound Ligand Allows the Opening of the Safety-Belt Loop.
Acta Crystallogr.,Sect.D, 63, 2007
5CSE
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BU of 5cse by Molmil
Streptavidin-S112Y-K121E Complexed with Palladium-Containing Biotin Ligand
分子名称: CHLORIDE ION, Streptavidin, chloro{di-tert-butyl[2-({5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}amino)ethyl]-lambda~5~-phosphanyl}(1-phenylprop-1-ene-1,3-diyl-kappa~2~C~1~,C~3~)palladium
著者Finke, A.D, Vera, L, Marsh, M, Chatterjee, A, Ward, T.R.
登録日2015-07-23
公開日2015-11-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.792 Å)
主引用文献An enantioselective artificial Suzukiase based on the biotin-streptavidin technology.
Chem Sci, 7, 2016
2K0B
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BU of 2k0b by Molmil
NMR structure of the UBA domain of p62 (SQSTM1)
分子名称: Sequestosome-1
著者Long, J.E, Ciani, B, Gallagher, T.R.A, Cavey, J.R, Sheppard, P.W, Layfield, R, Searle, M.S.
登録日2008-01-31
公開日2008-02-19
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Conformation and dynamics of the three-helix bundle UBA domain of p62 from experiment and simulation.
Proteins, 71, 2007
2JYH
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BU of 2jyh by Molmil
Rigid-body refinement of the tetraloop-receptor RNA complex
分子名称: RNA (43-MER)
著者Zuo, X, Wang, J, Foster, T.R, Schwieters, C.D, Tiede, D.M.
登録日2007-12-13
公開日2008-10-07
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Rigid-body refinement of the tetraloop-receptor RNA complex
To be Published
5AB7
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Crystal structure of Trypanosoma brucei SCP2-thiolase like protein (TbSLP) in complex with malonyl-CoA.
分子名称: MALONYL-COENZYME A, SCP2-THIOLASE LIKE PROTEIN, SULFATE ION
著者Harijan, R.K, Kiema, T.R, Wierenga, R.K.
登録日2015-08-02
公開日2016-05-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Scp2-Thiolase-Like Protein (Slp) of Trypanosoma Brucei is an Enzyme Involved in Lipid Metabolism.
Proteins, 84, 2016
5AB5
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Crystal structure of Trypanosoma brucei SCP2-thiolase like protein (TbSLP) form-II.
分子名称: SCP2-THIOLASE LIKE PROTEIN, SULFATE ION
著者Harijan, R.K, Kiema, T.R, Wierenga, R.K.
登録日2015-08-01
公開日2016-05-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Scp2-Thiolase-Like Protein (Slp) of Trypanosoma Brucei is an Enzyme Involved in Lipid Metabolism.
Proteins, 84, 2016
2J9X
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Tryptophan Synthase in complex with GP, alpha-D,L-glycerol-phosphate, Cs, pH6.5 - alpha aminoacrylate form - (GP)E(A-A)
分子名称: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID, CESIUM ION, DIMETHYL SULFOXIDE, ...
著者Ngo, H, Kimmich, N, Harris, R, Niks, D, Blumenstein, L, Kulik, V, Barends, T.R, Schlichting, I, Dunn, M.F.
登録日2006-11-16
公開日2007-06-26
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Allosteric Regulation of Substrate Channeling in Tryptophan Synthase: Modulation of the L-Serine Reaction in Stage I of the Beta-Reaction by Alpha-Site Ligands.
Biochemistry, 46, 2007
2I46
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Crystal structure of human TPP1
分子名称: Adrenocortical dysplasia protein homolog
著者Wang, F, Podell, E.R, Zaug, A.J, Yang, Y.T, Baciu, P, Else, T, Hammer, G.D, Cech, T.R, Lei, M.
登録日2006-08-21
公開日2006-11-28
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The POT1-TPP1 telomere complex is a telomerase processivity factor.
Nature, 445, 2007
5AHS
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BU of 5ahs by Molmil
3-Sulfinopropionyl-Coenzyme A (3SP-CoA) desulfinase from Advenella mimgardefordensis DPN7T: holo crystal structure with the substrate analog succinyl-CoA
分子名称: ACYL-COA DEHYDROGENASE, COENZYME A, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Cianci, M, Schuermann, M, Meijers, R, Schneider, T.R, Steinbuechel, A.
登録日2015-02-06
公開日2015-06-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献3-Sulfinopropionyl-Coenzyme a (3Sp-Coa) Desulfinase from Advenella Mimigardefordensis Dpn7(T): Crystal Structure and Function of a Desulfinase with an Acyl-Coa Dehydrogenase Fold.
Acta Crystallogr.,Sect.D, 71, 2015
2GWR
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BU of 2gwr by Molmil
Crystal structure of the response regulator protein mtrA from Mycobacterium Tuberculosis
分子名称: CALCIUM ION, DNA-binding response regulator mtrA, GLYCEROL
著者Friedland, N, Mack, T.R, Yu, M, Bursey, E.H, Hung, L.W, Stock, A.M, Waldo, G.S, Terwilliger, T.C.
登録日2006-05-05
公開日2006-05-23
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Domain orientation in the inactive response regulator Mycobacterium tuberculosis MtrA provides a barrier to activation.
Biochemistry, 46, 2007
5BTN
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BU of 5btn by Molmil
Crystal structure of a topoisomerase II complex
分子名称: 1-cyclopropyl-6-fluoro-8-methyl-7-[(4aS,7aS)-octahydro-6H-pyrrolo[3,4-b]pyridin-6-yl]-4-oxo-1,4-dihydroquinoline-3-carboxylic acid, DNA gyrase subunit A, DNA gyrase subunit B, ...
著者Blower, T.R, Williamson, B.H, Kerns, R.J, Berger, J.M.
登録日2015-06-03
公開日2016-03-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure and stability of gyrase-fluoroquinolone cleaved complexes from Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.USA, 113, 2016
5BTA
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BU of 5bta by Molmil
Crystal structure of a topoisomerase II complex
分子名称: 1-cyclopropyl-6-fluoro-8-methoxy-7-[(4aS,7aS)-octahydro-6H-pyrrolo[3,4-b]pyridin-6-yl]-4-oxo-1,4-dihydroquinoline-3-carboxylic acid, DNA gyrase subunit A, DNA gyrase subunit B, ...
著者Blower, T.R, Williamson, B.H, Kerns, R.J, Berger, J.M.
登録日2015-06-02
公開日2016-03-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structure and stability of gyrase-fluoroquinolone cleaved complexes from Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.USA, 113, 2016
2H9T
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BU of 2h9t by Molmil
Crystal structure of human alpha-thrombin in complex with suramin
分子名称: 8,8'-[CARBONYLBIS[IMINO-3,1-PHENYLENECARBONYLIMINO(4-METHYL-3,1-PHENYLENE)CARBONYLIMINO]]BIS-1,3,5-NAPHTHALENETRISULFON IC ACID, PPACK active site thrombin inhibitor, Thrombin
著者Lima, L.M.T.R, Polikarpov, I, Monteiro, R.Q.
登録日2006-06-11
公開日2007-05-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and thermodynamic analysis of thrombin:suramin interaction in solution and crystal phases.
Biochim.Biophys.Acta, 1794, 2009
2GL1
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BU of 2gl1 by Molmil
NMR solution structure of Vigna radiata Defensin 2 (VrD2)
分子名称: PDF1
著者Lin, K.F, Lee, T.R, Tsai, P.H, Hsu, M.P, Chen, C.S, Lyu, P.C.
登録日2006-04-04
公開日2007-04-03
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Structure-based protein engineering for alpha-amylase inhibitory activity of plant defensin.
Proteins, 68, 2007
5BRV
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BU of 5brv by Molmil
Catalytic Improvement of an Artificial Metalloenzyme by Computational Design
分子名称: Carbonic anhydrase 2, ZINC ION, pentamethylcyclopentadienyl iridium [N-benzensulfonamide-(2-pyridylmethyl-4-benzensulfonamide)amin] chloride
著者Heinisch, T, Pellizzoni, M, Duerrenberger, M, Tinberg, C.E, Koehler, V, Klehr, J, Haeussinger, D, Baker, D, Ward, T.R.
登録日2015-06-01
公開日2015-06-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Improving the Catalytic Performance of an Artificial Metalloenzyme by Computational Design.
J.Am.Chem.Soc., 137, 2015
5BRU
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BU of 5bru by Molmil
Catalytic Improvement of an Artificial Metalloenzyme by Computational Design
分子名称: Carbonic anhydrase 2, SULFATE ION, ZINC ION, ...
著者Heinisch, T, Pellizzoni, M, Duerrenberger, M, Tinberg, C.E, Koehler, V, Klehr, J, Haeussinger, D, Baker, D, Ward, T.R.
登録日2015-06-01
公開日2015-06-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Improving the Catalytic Performance of an Artificial Metalloenzyme by Computational Design.
J.Am.Chem.Soc., 137, 2015
5BS8
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BU of 5bs8 by Molmil
Crystal structure of a topoisomerase II complex
分子名称: 1-cyclopropyl-6-fluoro-8-methoxy-7-[(4aS,7aS)-octahydro-6H-pyrrolo[3,4-b]pyridin-6-yl]-4-oxo-1,4-dihydroquinoline-3-carboxylic acid, DNA gyrase subunit A, DNA gyrase subunit B, ...
著者Blower, T.R, Williamson, B.H, Kerns, R.J, Berger, J.M.
登録日2015-06-01
公開日2016-03-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.399 Å)
主引用文献Crystal structure and stability of gyrase-fluoroquinolone cleaved complexes from Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.USA, 113, 2016
5BTI
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Crystal structure of a topoisomerase II complex
分子名称: (3S)-9-fluoro-3-methyl-10-(4-methylpiperazin-1-yl)-7-oxo-2,3-dihydro-7H-[1,4]oxazino[2,3,4-ij]quinoline-6-carboxylic acid, DNA gyrase subunit A, DNA gyrase subunit B, ...
著者Blower, T.R, Williamson, B.H, Kerns, R.J, Berger, J.M.
登録日2015-06-03
公開日2016-03-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献Crystal structure and stability of gyrase-fluoroquinolone cleaved complexes from Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.USA, 113, 2016
2GLX
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Crystal Structure Analysis of bacterial 1,5-AF Reductase
分子名称: 1,5-anhydro-D-fructose reductase, ACETATE ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Dambe, T.R, Scheidig, A.J.
登録日2006-04-05
公開日2006-08-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of NADP(H)-Dependent 1,5-Anhydro-d-fructose Reductase from Sinorhizobium morelense at 2.2 A Resolution: Construction of a NADH-Accepting Mutant and Its Application in Rare Sugar Synthesis
Biochemistry, 45, 2006
5BTL
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BU of 5btl by Molmil
Crystal structure of a topoisomerase II complex
分子名称: 1-cyclopropyl-6-fluoro-8-methyl-7-[(4aS,7aS)-octahydro-6H-pyrrolo[3,4-b]pyridin-6-yl]-4-oxo-1,4-dihydroquinoline-3-carboxylic acid, DNA gyrase subunit A, DNA gyrase subunit B, ...
著者Blower, T.R, Williamson, B.H, Kerns, R.J, Berger, J.M.
登録日2015-06-03
公開日2016-03-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure and stability of gyrase-fluoroquinolone cleaved complexes from Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.USA, 113, 2016
5BRW
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BU of 5brw by Molmil
Catalytic Improvement of an Artificial Metalloenzyme by Computational Design
分子名称: ACETATE ION, Carbonic anhydrase 2, SULFATE ION, ...
著者Heinisch, T, Pellizzoni, M, Duerrenberger, M, Tinberg, C.E, Koehler, V, Klehr, J, Haeussinger, D, Baker, D, Ward, T.R.
登録日2015-06-01
公開日2015-06-17
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Improving the Catalytic Performance of an Artificial Metalloenzyme by Computational Design.
J.Am.Chem.Soc., 137, 2015
5BTC
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BU of 5btc by Molmil
Crystal structure of a topoisomerase II complex
分子名称: 1-CYCLOPROPYL-6-FLUORO-4-OXO-7-PIPERAZIN-1-YL-1,4-DIHYDROQUINOLINE-3-CARBOXYLIC ACID, DNA gyrase subunit A, DNA gyrase subunit B, ...
著者Blower, T.R, Williamson, B.H, Kerns, R.J, Berger, J.M.
登録日2015-06-02
公開日2016-03-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structure and stability of gyrase-fluoroquinolone cleaved complexes from Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.USA, 113, 2016
5BTD
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BU of 5btd by Molmil
Crystal structure of a topoisomerase II complex
分子名称: 1-cyclopropyl-6-fluoro-8-methoxy-7-[(3S)-3-methylpiperazin-1-yl]-4-oxo-1,4-dihydroquinoline-3-carboxylic acid, DNA gyrase subunit A, DNA gyrase subunit B, ...
著者Blower, T.R, Williamson, B.H, Kerns, R.J, Berger, J.M.
登録日2015-06-03
公開日2016-03-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.497 Å)
主引用文献Crystal structure and stability of gyrase-fluoroquinolone cleaved complexes from Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.USA, 113, 2016

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