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PDB: 1345 results

5EQ3
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Crystal structure of the SrpA adhesin from Streptococcus sanguinis with a sialyl galactose disaccharide bound
Descriptor: ACETATE ION, CALCIUM ION, N-glycolyl-alpha-neuraminic acid-(2-3)-methyl beta-D-galactopyranoside, ...
Authors:Loukachevitch, L.V, McCulloch, K.M, Vann, K.R, Wawrzak, Z, Anderson, S, Iverson, T.M.
Deposit date:2015-11-12
Release date:2016-01-27
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for Sialoglycan Binding by the Streptococcus sanguinis SrpA Adhesin.
J.Biol.Chem., 291, 2016
5CIG
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Complex of yeast cytochrome c peroxidase (W191G) with iso-1 cytochrome c
Descriptor: Cytochrome c iso-1, Cytochrome c peroxidase, mitochondrial, ...
Authors:Crane, B.R, Payne, T.M.
Deposit date:2015-07-12
Release date:2016-08-03
Last modified:2021-03-10
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Constraints on the Radical Cation Center of Cytochrome c Peroxidase for Electron Transfer from Cytochrome c.
Biochemistry, 55, 2016
5EQB
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Crystal structure of lanosterol 14-alpha demethylase with intact transmembrane domain bound to itraconazole
Descriptor: 2-[(2R)-butan-2-yl]-4-{4-[4-(4-{[(2R,4S)-2-(2,4-dichlorophenyl)-2-(1H-1,2,4-triazol-1-ylmethyl)-1,3-dioxolan-4-yl]methoxy}phenyl)piperazin-1-yl]phenyl}-2,4-dihydro-3H-1,2,4-triazol-3-one, Lanosterol 14-alpha demethylase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Monk, B.C, Tomasiak, T.M, Keniya, M.V, Huschmann, F.U, Tyndall, J.D.A, O'Connell III, J.D, Cannon, R.D, Finer-Morre, J, Stroud, R.M, Center for Structures of Membrane Proteins (CSMP)
Deposit date:2015-11-12
Release date:2016-01-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Architecture of a single membrane spanning cytochrome P450 suggests constraints that orient the catalytic domain relative to a bilayer.
Proc.Natl.Acad.Sci.USA, 111, 2014
7OGI
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BU of 7ogi by Molmil
Human Cyclophilin D in complex with N-(5-ethyl-4-oxo-1,2,3,4,5,6-hexahydro-1,5-benzodiazocin-8-yl)-7methyl-2-oxo-1H,2H-pyrazolo[1,5-a]pyrimidine-6-carboxamide
Descriptor: DIMETHYL SULFOXIDE, N-(5-ethyl-4-oxidanylidene-1,2,3,6-tetrahydro-1,5-benzodiazocin-8-yl)-7-methyl-2-oxidanylidene-1H-pyrazolo[1,5-a]pyrimidine-6-carboxamide, Peptidyl-prolyl cis-trans isomerase F, ...
Authors:Silva, D.O, Graedler, U, Bandeiras, T.M.
Deposit date:2021-05-06
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Human Cyclophilin D in complex with N-(5-ethyl-4-oxo-1,2,3,4,5,6-hexahydro-1,5-benzodiazocin-8-yl)-7methyl-2-oxo-1H,2H-pyrazolo[1,5-a]pyrimidine-6-carboxamide
To Be Published
5CIB
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BU of 5cib by Molmil
Complex of yeast cytochrome c peroxidase (W191G) bound to 2,4-dimethylaniline with iso-1 cytochrome c
Descriptor: 2,4-dimethylaniline, Cytochrome c iso-1, Cytochrome c peroxidase, ...
Authors:Crane, B.R, Payne, T.M.
Deposit date:2015-07-11
Release date:2016-08-03
Last modified:2021-03-10
Method:X-RAY DIFFRACTION (3.011 Å)
Cite:Constraints on the Radical Cation Center of Cytochrome c Peroxidase for Electron Transfer from Cytochrome c.
Biochemistry, 55, 2016
1IHI
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BU of 1ihi by Molmil
Crystal Structure of Human Type III 3-alpha-Hydroxysteroid Dehydrogenase/Bile Acid Binding Protein (AKR1C2) Complexed with NADP+ and Ursodeoxycholate
Descriptor: 3-ALPHA-HYDROXYSTEROID DEHYDROGENASE, ISO-URSODEOXYCHOLIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Jin, Y, Stayrook, S.E, Albert, R.H, Palackal, N.T, Penning, T.M, Lewis, M.
Deposit date:2001-04-19
Release date:2001-10-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of human type III 3alpha-hydroxysteroid dehydrogenase/bile acid binding protein complexed with NADP(+) and ursodeoxycholate.
Biochemistry, 40, 2001
3C4O
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BU of 3c4o by Molmil
Crystal Structure of the SHV-1 Beta-lactamase/Beta-lactamase inhibitor protein (BLIP) E73M/S130K/S146M complex
Descriptor: Beta-lactamase SHV-1, Beta-lactamase inhibitory protein, SULFATE ION
Authors:Reynolds, K.A, Hanes, M.S, Thomson, J.M, Antczak, A.J, Berger, J.M, Bonomo, R.A, Kirsch, J.F, Handel, T.M.
Deposit date:2008-01-30
Release date:2008-05-27
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Computational redesign of the SHV-1 beta-lactamase/beta-lactamase inhibitor protein interface.
J.Mol.Biol., 382, 2008
5BZ5
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BU of 5bz5 by Molmil
Crystal structure of the RNA-binding domain of yeast Puf5p bound to AMN1 RNA
Descriptor: RNA (5'-R(*UP*GP*UP*AP*AP*CP*UP*UP*UP*A)-3'), Suppressor protein MPT5
Authors:Qiu, C, Hall, T.M.T.
Deposit date:2015-06-11
Release date:2015-09-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:RNA regulatory networks diversified through curvature of the PUF protein scaffold.
Nat Commun, 6, 2015
5BZV
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Crystal structure of the RNA-binding domain of yeast Puf5p bound to SMX2 RNA
Descriptor: RNA (5'-R(*UP*GP*UP*AP*CP*UP*AP*UP*A)-3'), Suppressor protein MPT5
Authors:Qiu, C, Hall, T.M.T.
Deposit date:2015-06-11
Release date:2015-09-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.354 Å)
Cite:RNA regulatory networks diversified through curvature of the PUF protein scaffold.
Nat Commun, 6, 2015
3BQB
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BU of 3bqb by Molmil
Hexagonal kristal form of 2-keto-3-deoxyarabinonate dehydratase
Descriptor: MAGNESIUM ION, Putative uncharacterized protein
Authors:Barends, T.M, Brouns, S, Worm, P, Akerboom, J, Turnbull, A, Salmon, L.
Deposit date:2007-12-20
Release date:2008-04-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural insight into substrate binding and catalysis of a novel 2-keto-3-deoxy-D-arabinonate dehydratase illustrates common mechanistic features of the FAH superfamily
J.Mol.Biol., 379, 2008
3BUV
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BU of 3buv by Molmil
Crystal structure of human Delta(4)-3-ketosteroid 5-beta-reductase in complex with NADP and HEPES. Resolution: 1.35 A.
Descriptor: 3-oxo-5-beta-steroid 4-dehydrogenase, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, ...
Authors:Di Costanzo, L, Drury, J, Penning, T.M, Christianson, D.W.
Deposit date:2008-01-03
Release date:2008-04-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal Structure of Human Liver {Delta}4-3-Ketosteroid 5{beta}-Reductase (AKR1D1) and Implications for Substrate Binding and Catalysis.
J.Biol.Chem., 283, 2008
3BX2
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BU of 3bx2 by Molmil
Puf4 RNA binding domain bound to HO endonuclease RNA 3' UTR recognition sequence
Descriptor: HO endonuclease 3' UTR binding sequence, Protein PUF4, SODIUM ION, ...
Authors:Miller, M.T, Higgin, J.J, Hall, T.M.T.
Deposit date:2008-01-11
Release date:2008-03-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Basis of altered RNA-binding specificity by PUF proteins revealed by crystal structures of yeast Puf4p
Nat.Struct.Mol.Biol., 15, 2008
1L8P
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BU of 1l8p by Molmil
Mg-phosphonoacetohydroxamate complex of S39A yeast enolase 1
Descriptor: MAGNESIUM ION, PHOSPHONOACETOHYDROXAMIC ACID, enolase 1
Authors:Poyner, R.R, Larsen, T.M, Wong, S.W, Reed, G.H.
Deposit date:2002-03-21
Release date:2002-04-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Functional and structural changes due to a serine to alanine mutation in the active-site flap of enolase.
Arch.Biochem.Biophys., 401, 2002
1JT4
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BU of 1jt4 by Molmil
Human Acidic Fibroblast Growth Factor. 141 Amino Acid Form with Amino Terminal His Tag AND VAL 109 REPLACED BY LEU (V109L)
Descriptor: FORMIC ACID, acidic fibroblast growth factor
Authors:Brych, S.R, Blaber, S.I, Logan, T.M, Blaber, M.
Deposit date:2001-08-20
Release date:2001-12-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structure and stability effects of mutations designed to increase the primary sequence symmetry within the core region of a beta-trefoil.
Protein Sci., 10, 2001
1JT7
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BU of 1jt7 by Molmil
Human Acidic Fibroblast Growth Factor. 141 Amino Acid Form with Amino Terminal His Tag AND LEU 44 REPLACED BY PHE AND LEU 73 REPLACED BY VAL AND VAL 109 REPLACED BY LEU (L44F/L73V/V109L)
Descriptor: FORMIC ACID, SULFATE ION, acidic fibroblast growth factor
Authors:Brych, S.R, Blaber, S.I, Logan, T.M, Blaber, M.
Deposit date:2001-08-20
Release date:2001-12-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and stability effects of mutations designed to increase the primary sequence symmetry within the core region of a beta-trefoil.
Protein Sci., 10, 2001
3BX3
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BU of 3bx3 by Molmil
Puf4 T650C/C724R Mutant bound to Cox17 RNA 3' UTR recognition sequence
Descriptor: COX17 RNA target sequence, Protein PUF4, SULFATE ION
Authors:Miller, M.T, Higgin, J.J, Hall, T.M.T.
Deposit date:2008-01-11
Release date:2008-03-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Basis of altered RNA-binding specificity by PUF proteins revealed by crystal structures of yeast Puf4p
Nat.Struct.Mol.Biol., 15, 2008
3C7F
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Crystal structure of a glycoside hydrolase family 43 arabinoxylan arabinofuranohydrolase from bacillus subtilis in complex with xylotriose.
Descriptor: CALCIUM ION, Endo-1,4-beta-xylanase, FORMIC ACID, ...
Authors:Vandermarliere, E, Bourgois, T.M, Winn, M.D, Van Campenhout, S, Volckaert, G, Strelkov, S.V, Delcour, J.A, Rabijns, A, Courtin, C.M.
Deposit date:2008-02-07
Release date:2008-11-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural analysis of a glycoside hydrolase family 43 arabinoxylan arabinofuranohydrolase in complex with xylotetraose reveals a different binding mechanism compared with other members of the same family.
Biochem.J., 418, 2009
5EO1
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BU of 5eo1 by Molmil
Crystal Structure of HLA-B0702-RL9
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-7 alpha chain, ...
Authors:Josephs, T.M, Gras, S, Rossjohn, J.
Deposit date:2015-11-10
Release date:2016-02-24
Last modified:2016-04-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:HIV-1-Specific CD8 T Cells Exhibit Limited Cross-Reactivity during Acute Infection.
J Immunol., 196, 2016
5ES7
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BU of 5es7 by Molmil
Crystal structure of the F-A domains of the LgrA initiation module soaked with FON, AMPcPP, and valine.
Descriptor: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, Linear gramicidin synthetase subunit A, N-{[4-({[(6R)-2-amino-5-formyl-4-oxo-1,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)phenyl]carbonyl}-L-glutamic acid, ...
Authors:Reimer, J.M, Aloise, M.N, Schmeing, T.M.
Deposit date:2015-11-16
Release date:2016-01-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.805 Å)
Cite:Synthetic cycle of the initiation module of a formylating nonribosomal peptide synthetase.
Nature, 529, 2016
5CIE
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BU of 5cie by Molmil
Complex of yeast cytochrome c peroxidase (W191G) bound to aniline with iso-1 cytochrome c
Descriptor: ANILINE, Cytochrome c iso-1, Cytochrome c peroxidase, ...
Authors:Crane, B.R, Payne, T.M.
Deposit date:2015-07-12
Release date:2016-08-03
Last modified:2021-03-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Constraints on the Radical Cation Center of Cytochrome c Peroxidase for Electron Transfer from Cytochrome c.
Biochemistry, 55, 2016
3C4P
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BU of 3c4p by Molmil
Crystal Structure of the SHV-1 Beta-lactamase/Beta-lactamase inhibitor protein (BLIP) E73M complex
Descriptor: Beta-lactamase SHV-1, Beta-lactamase inhibitory protein, SULFATE ION
Authors:Reynolds, K.A, Hanes, M.S, Thomson, J.M, Antczak, A.J, Berger, J.M, Bonomo, R.A, Kirsch, J.F, Handel, T.M.
Deposit date:2008-01-30
Release date:2008-05-27
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Computational redesign of the SHV-1 beta-lactamase/beta-lactamase inhibitor protein interface.
J.Mol.Biol., 382, 2008
5CIF
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BU of 5cif by Molmil
Complex of yeast cytochrome c peroxidase (W191F) with iso-1 cytochrome c
Descriptor: Cytochrome c iso-1, Cytochrome c peroxidase, mitochondrial, ...
Authors:Crane, B.R, Payne, T.M.
Deposit date:2015-07-12
Release date:2016-08-03
Last modified:2021-03-10
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Constraints on the Radical Cation Center of Cytochrome c Peroxidase for Electron Transfer from Cytochrome c.
Biochemistry, 55, 2016
1I1J
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BU of 1i1j by Molmil
STRUCTURE OF MELANOMA INHIBITORY ACTIVITY PROTEIN: A MEMBER OF A NEW FAMILY OF SECRETED PROTEINS
Descriptor: MELANOMA DERIVED GROWTH REGULATORY PROTEIN
Authors:Lougheed, J.C, Holton, J.M, Alber, T, Bazan, J.F, Handel, T.M.
Deposit date:2001-02-02
Release date:2001-05-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Structure of melanoma inhibitory activity protein, a member of a recently identified family of secreted proteins.
Proc.Natl.Acad.Sci.USA, 98, 2001
5CID
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BU of 5cid by Molmil
Complex of yeast cytochrome c peroxidase (W191G) bound to o-toluidine with iso-1 cytochrome c
Descriptor: 2-methylaniline, Cytochrome c iso-1, Cytochrome c peroxidase, ...
Authors:Crane, B.R, Payne, T.M.
Deposit date:2015-07-12
Release date:2016-08-03
Last modified:2021-03-10
Method:X-RAY DIFFRACTION (2.763 Å)
Cite:Constraints on the Radical Cation Center of Cytochrome c Peroxidase for Electron Transfer from Cytochrome c.
Biochemistry, 55, 2016
3C7H
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BU of 3c7h by Molmil
Crystal structure of glycoside hydrolase family 43 arabinoxylan arabinofuranohydrolase from Bacillus subtilis in complex with AXOS-4-0.5.
Descriptor: CALCIUM ION, Endo-1,4-beta-xylanase, FORMIC ACID, ...
Authors:Vandermarliere, E, Bourgois, T.M, Winn, M.D, Van Campenhout, S, Volckaert, G, Strelkov, S.V, Delcour, J.A, Rabijns, A, Courtin, C.M.
Deposit date:2008-02-07
Release date:2008-11-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural analysis of a glycoside hydrolase family 43 arabinoxylan arabinofuranohydrolase in complex with xylotetraose reveals a different binding mechanism compared with other members of the same family.
Biochem.J., 418, 2009

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数据于2024-07-10公开中

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