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PDB: 93 results

5AXN
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BU of 5axn by Molmil
Crystal structure of Thg1 like protein (TLP) with tRNA(Phe) and GDPNP
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, RNA (75-MER), ...
Authors:Kimura, S, Suzuki, T, Yu, J, Kato, K, Yao, M.
Deposit date:2015-07-31
Release date:2016-08-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.703 Å)
Cite:Template-dependent nucleotide addition in the reverse (3'-5') direction by Thg1-like protein
Sci Adv, 2, 2016
5AXL
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BU of 5axl by Molmil
Crystal structure of Thg1 like protein (TLP) with GTP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, tRNA(His)-5'-guanylyltransferase (Thg1) like protein
Authors:Kimura, S, Suzuki, T, Yu, J, Kato, K, Yao, M.
Deposit date:2015-07-31
Release date:2016-08-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.998 Å)
Cite:Template-dependent nucleotide addition in the reverse (3'-5') direction by Thg1-like protein
Sci Adv, 2, 2016
5AXK
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BU of 5axk by Molmil
Crystal structure of Thg1 like protein (TLP)
Descriptor: GLYCEROL, tRNA(His)-5'-guanylyltransferase (Thg1) like protein
Authors:Kimura, S, Suzuki, T, Yu, J, Kato, K, Yao, M.
Deposit date:2015-07-31
Release date:2016-08-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Template-dependent nucleotide addition in the reverse (3'-5') direction by Thg1-like protein
Sci Adv, 2, 2016
6JJN
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BU of 6jjn by Molmil
Crystal structure of Mumps virus hemagglutinin-neuraminidase bound to sialyl lewisX
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HN protein, ...
Authors:Kubota, M, Matsuoka, R, Suzuki, T, Yonekura, K, Yanagi, Y, Hashiguchi, T.
Deposit date:2019-02-26
Release date:2019-05-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular Mechanism of the Flexible Glycan Receptor Recognition by Mumps Virus.
J.Virol., 93, 2019
2ZZK
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BU of 2zzk by Molmil
Crystal structure of tRNA wybutosine synthesizing enzyme TYW4
Descriptor: CITRIC ACID, Leucine carboxyl methyltransferase 2, TETRAETHYLENE GLYCOL
Authors:Suzuki, Y, Noma, A, Suzuki, T, Ishitani, R, Nureki, O.
Deposit date:2009-02-17
Release date:2009-06-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.706 Å)
Cite:Structural basis of tRNA modification with CO2 fixation and methylation by wybutosine synthesizing enzyme TYW4.
Nucleic Acids Res., 37, 2009
6JJM
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BU of 6jjm by Molmil
Crystal structure of Mumps virus hemagglutinin-neuraminidase bound to the oligosaccharide portion of the GM2 ganglioside
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HN protein, ...
Authors:Kubota, M, Matsuoka, R, Suzuki, T, Yonekura, K, Yanagi, Y, Hashiguchi, T.
Deposit date:2019-02-26
Release date:2019-05-22
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.049 Å)
Cite:Molecular Mechanism of the Flexible Glycan Receptor Recognition by Mumps Virus.
J.Virol., 93, 2019
2ZWA
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BU of 2zwa by Molmil
Crystal structure of tRNA wybutosine synthesizing enzyme TYW4
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, Leucine carboxyl methyltransferase 2, ...
Authors:Suzuki, Y, Noma, A, Suzuki, T, Ishitani, R, Nureki, O.
Deposit date:2008-12-01
Release date:2009-06-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis of tRNA modification with CO2 fixation and methylation by wybutosine synthesizing enzyme TYW4.
Nucleic Acids Res., 37, 2009
2ZW9
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BU of 2zw9 by Molmil
Crystal structure of tRNA wybutosine synthesizing enzyme TYW4
Descriptor: Leucine carboxyl methyltransferase 2, S-ADENOSYLMETHIONINE
Authors:Suzuki, Y, Noma, A, Suzuki, T, Ishitani, R, Nureki, O.
Deposit date:2008-12-01
Release date:2009-06-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of tRNA modification with CO2 fixation and methylation by wybutosine synthesizing enzyme TYW4.
Nucleic Acids Res., 37, 2009
5ZR3
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BU of 5zr3 by Molmil
Crystal structure of Hsp90-alpha N-terminal domain in complex with 4-(3-isopropyl-4-(4-(1-methyl-1H-pyrazol-4-yl)-1H-imidazol-1-yl)-1H-pyrazolo[3,4-b]pyridin-1-yl)-3-methylbenzamide
Descriptor: 3-methyl-4-{4-[4-(1-methyl-1H-pyrazol-4-yl)-1H-imidazol-1-yl]-3-(propan-2-yl)-1H-pyrazolo[3,4-b]pyridin-1-yl}benzamide, Heat shock protein HSP 90-alpha
Authors:Uno, T, Chong, K.T, Suzuki, T.
Deposit date:2018-04-23
Release date:2019-01-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery of 3-Ethyl-4-(3-isopropyl-4-(4-(1-methyl-1 H-pyrazol-4-yl)-1 H-imidazol-1-yl)-1 H-pyrazolo[3,4- b]pyridin-1-yl)benzamide (TAS-116) as a Potent, Selective, and Orally Available HSP90 Inhibitor.
J. Med. Chem., 62, 2019
7DU8
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BU of 7du8 by Molmil
Crystal structure of human Proto-oncogene tyrosine-protein kinase receptor Ret in complex with Selpercatinib
Descriptor: Proto-oncogene tyrosine-protein kinase receptor Ret, Selpercatinib
Authors:Miyazaki, I, Ishida, K, Suzuki, T.
Deposit date:2021-01-08
Release date:2022-02-02
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Selective RET inhibitor TAS0953/HM06
To be published
7DUA
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BU of 7dua by Molmil
Crystal structure of human Proto-oncogene tyrosine-protein kinase receptor Ret in complex with 4-amino-7-(1-methylcyclopropyl)-N-(5-methyl-1H-pyrazol-3-yl)pyrrolo[2,3-d]pyrimidine-5-carboxamide
Descriptor: 4-azanyl-7-(1-methylcyclopropyl)-~{N}-(5-methyl-1~{H}-pyrazol-3-yl)pyrrolo[2,3-d]pyrimidine-5-carboxamide, Proto-oncogene tyrosine-protein kinase receptor Ret
Authors:Miyazaki, I, Ishida, K, Suzuki, T.
Deposit date:2021-01-08
Release date:2022-01-12
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Selective RET inhibitor TAS0953/HM06
To be published
7DU9
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BU of 7du9 by Molmil
Crystal structure of human Proto-oncogene tyrosine-protein kinase receptor Ret in complex with Pralsetinib
Descriptor: Pralsetinib, Proto-oncogene tyrosine-protein kinase receptor Ret
Authors:Miyazaki, I, Ishida, K, Suzuki, T.
Deposit date:2021-01-08
Release date:2022-01-12
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Selective RET inhibitor TAS0953/HM06
To be published
7EWS
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BU of 7ews by Molmil
Crystal structure of arginine kinase (AK3) from the ciliate Paramecium tetraurelia
Descriptor: arginine kinase
Authors:Otsuka, Y, Yokota, J, Yano, D, Uda, K, Suzuki, T, Sugiyama, S.
Deposit date:2021-05-26
Release date:2022-06-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of arginine kinase (AK3) from the ciliate Paramecium tetraurelia
To Be Published
3WY9
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BU of 3wy9 by Molmil
Crystal structure of a complex of the archaeal ribosomal stalk protein aP1 and the GDP-bound archaeal elongation factor aEF1alpha
Descriptor: 50S ribosomal protein L12, Elongation factor 1-alpha, GUANOSINE-5'-DIPHOSPHATE
Authors:Ito, K, Honda, T, Suzuki, T, Miyoshi, T, Murakami, R, Yao, M, Uchiumi, T.
Deposit date:2014-08-22
Release date:2014-12-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular insights into the interaction of the ribosomal stalk protein with elongation factor 1 alpha.
Nucleic Acids Res., 42, 2014
3WYA
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BU of 3wya by Molmil
Crystal structure of GDP-bound EF1alpha from Pyrococcus horikoshii
Descriptor: Elongation factor 1-alpha, GUANOSINE-5'-DIPHOSPHATE
Authors:Ito, K, Honda, T, Suzuki, T, Miyoshi, T, Murakami, R, Yao, M, Uchiumi, T.
Deposit date:2014-08-22
Release date:2014-12-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Molecular insights into the interaction of the ribosomal stalk protein with elongation factor 1 alpha.
Nucleic Acids Res., 42, 2014
3VUO
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BU of 3vuo by Molmil
Crystal structure of nontoxic nonhemagglutinin subcomponent (NTNHA) from clostridium botulinum serotype D strain 4947
Descriptor: NTNHA
Authors:Sagane, Y, Miyashita, S.-I, Miyata, K, Matsumoto, T, Inui, K, Hayashi, S, Suzuki, T, Hasegawa, K, Yajima, S, Yamano, A, Niwa, K, Watanabe, T.
Deposit date:2012-07-03
Release date:2012-09-19
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Small-angle X-ray scattering reveals structural dynamics of the botulinum neurotoxin associating protein, nontoxic nonhemagglutinin
Biochem.Biophys.Res.Commun., 425, 2012
3VUN
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BU of 3vun by Molmil
Crystal structure of a influenza A virus (A/Aichi/2/1968 H3N2) hemagglutinin in C2 space group.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, ...
Authors:Yasutake, Y, Suzuki, T, Kawaguchi, A, Nobusawa, E.
Deposit date:2012-07-02
Release date:2012-08-01
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of a influenza A virus (A/Aichi/2/1968 H3N2) hemagglutinin in C2 space group
To be Published
3WLU
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BU of 3wlu by Molmil
Crystal Structure of human galectin-9 NCRD with Selenolactose
Descriptor: 2-(trimethylsilyl)ethyl 4-O-beta-D-galactopyranosyl-6-Se-methyl-6-seleno-beta-D-glucopyranoside, Galectin-9
Authors:Makyio, H, Suzuki, T, Ando, H, Yamada, Y, Ishida, H, Kiso, M, Wakatsuki, S, Kato, R.
Deposit date:2013-11-14
Release date:2014-11-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Expanded potential of seleno-carbohydrates as a molecular tool for X-ray structural determination of a carbohydrate-protein complex with single/multi-wavelength anomalous dispersion phasing
Bioorg.Med.Chem., 22, 2014
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