Crystal structure of tRNA wybutosine synthesizing enzyme TYW4

Summary for 2ZW9

Related2ZW8 2ZWA
DescriptorLeucine carboxyl methyltransferase 2, S-ADENOSYLMETHIONINE (3 entities in total)
Functional Keywordstransferase
Biological sourceSaccharomyces cerevisiae
Total number of polymer chains2
Total molecular weight158897.87
Suzuki, Y.,Noma, A.,Suzuki, T.,Ishitani, R.,Nureki, O. (deposition date: 2008-12-01, release date: 2009-06-02, Last modification date: 2011-07-13)
Primary citation
Suzuki, Y.,Noma, A.,Suzuki, T.,Ishitani, R.,Nureki, O.
Structural basis of tRNA modification with CO2 fixation and methylation by wybutosine synthesizing enzyme TYW4.
Nucleic Acids Res., 37:2910-2925, 2009
PubMed: 19287006 (PDB entries with the same primary citation)
DOI: 10.1093/nar/gkp158
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.240130.5%4.4%2.1%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation reportDownload
PDB entries from 2020-09-16