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PDB: 108 results

6O1I
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BU of 6o1i by Molmil
Alpha-L-fucosidase AlfC fucosyltransferase mutant E274A
Descriptor: AlfC
Authors:Klontz, E.H, Sundberg, E.J.
Deposit date:2019-02-20
Release date:2020-02-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.55 Å)
Cite:Structure and dynamics of an alpha-fucosidase reveal a mechanism for highly efficient IgG transfucosylation.
Nat Commun, 11, 2020
5FHY
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BU of 5fhy by Molmil
Crystal structure of FliD (HAP2) from Pseudomonas aeruginosa PAO1
Descriptor: B-type flagellar hook-associated protein 2, SODIUM ION
Authors:Postel, S, Bonsor, D, Diederichs, K, Sundberg, E.J.
Deposit date:2015-12-22
Release date:2016-10-05
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Bacterial flagellar capping proteins adopt diverse oligomeric states.
Elife, 5, 2016
8ERM
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BU of 8erm by Molmil
Crystal structure of FliC D2/D3 domains from Pseudomonas aeruginosa PAO1
Descriptor: B-type flagellin, GLYCEROL, SULFATE ION
Authors:Nedeljkovic, M, Bonsor, D.A, Postel, S, Sundberg, E.J.
Deposit date:2022-10-12
Release date:2023-05-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.475 Å)
Cite:An unbroken network of interactions connecting flagellin domains is required for motility in viscous environments.
Plos Pathog., 19, 2023
3R8B
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BU of 3r8b by Molmil
Crystal structure of Staphylococcal Enterotoxin B in complex with an affinity matured mouse TCR VBeta8.2 protein, G5-8
Descriptor: CHLORIDE ION, Enterotoxin type B, G5-8, ...
Authors:Bonsor, D.A, Sundberg, E.J.
Deposit date:2011-03-23
Release date:2011-04-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Molecular basis of a million-fold affinity maturation process in a protein-protein interaction.
J.Mol.Biol., 411, 2011
1PYW
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BU of 1pyw by Molmil
Human class II MHC protein HLA-DR1 bound to a designed peptide related to influenza virus hemagglutinin, FVKQNA(MAA)AL, in complex with staphylococcal enterotoxin C3 variant 3B2 (SEC3-3B2)
Descriptor: 9-residue influenza virus hemagglutinin related peptide FVKQNA(MAA)AL, Enterotoxin type C-3, HLA class II histocompatibility antigen, ...
Authors:Zavala-Ruiz, Z, Sundberg, E.J, Stone, J.D, DeOliveira, D.B, Chan, I.C, Svendsen, J, Mariuzza, R.A, Stern, L.J.
Deposit date:2003-07-09
Release date:2003-12-09
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Exploration of the P6/P7 region of the peptide-binding site of the human class II Major Histocompatability Complex Protein HLA-DR1
J.Biol.Chem., 278, 2003
5KZP
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BU of 5kzp by Molmil
Structure of the HCV1-C1 Antibody-Antigen Complex
Descriptor: ACETATE ION, C1 Epitope, CALCIUM ION, ...
Authors:Piepenbrink, K.H, Sundberg, E.J.
Deposit date:2016-07-25
Release date:2017-07-05
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.262 Å)
Cite:Structure-Based Design of Hepatitis C Virus Vaccines That Elicit Neutralizing Antibody Responses to a Conserved Epitope.
J. Virol., 91, 2017
5IHJ
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BU of 5ihj by Molmil
Fusion of Maltose-binding Protein and PilA from Acinetobacter baumannii BIDMC57
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, GLYCEROL, ...
Authors:Piepenbrink, K.H, Sundberg, E.J.
Deposit date:2016-02-29
Release date:2016-09-21
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Diversity in the Type IV Pili of Multidrug-resistant Acinetobacter.
J.Biol.Chem., 291, 2016
7PUJ
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BU of 7puj by Molmil
Crystal structure of Endoglycosidase E GH18 domain from Enterococcus faecalis
Descriptor: Beta-N-acetylhexosaminidase, CHLORIDE ION, ZINC ION
Authors:Garcia-Alija, M, Du, J.J, Trastoy, B, Sundberg, E.J, Guerin, M.E.
Deposit date:2021-09-30
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.752 Å)
Cite:Mechanism of cooperative N-glycan processing by the multi-modular endoglycosidase EndoE.
Nat Commun, 13, 2022
7PUL
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BU of 7pul by Molmil
Crystal structure of Endoglycosidase E GH20 domain from Enterococcus faecalis
Descriptor: Beta-N-acetylhexosaminidase, CALCIUM ION, GLY-ALA-GLY-ALA-ALA, ...
Authors:Garcia-Alija, M, Du, J.J, Trastoy, B, Sundberg, E.J, Guerin, M.
Deposit date:2021-09-30
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Mechanism of cooperative N-glycan processing by the multi-modular endoglycosidase EndoE.
Nat Commun, 13, 2022
7PUK
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BU of 7puk by Molmil
Crystal structure of Endoglycosidase E GH18 domain from Enterococcus faecalis in complex with Man5 product
Descriptor: Beta-N-acetylhexosaminidase, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Garcia-Alija, M, Du, J.J, Trastoy, B, Sundberg, E.J, Guerin, M.
Deposit date:2021-09-30
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Mechanism of cooperative N-glycan processing by the multi-modular endoglycosidase EndoE.
Nat Commun, 13, 2022
6DHB
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BU of 6dhb by Molmil
Crystal structure of the human TIM-3 with bound Calcium
Descriptor: 1,2-ETHANEDIOL, BENZOIC ACID, CALCIUM ION, ...
Authors:Gandhi, A.K, Kim, W.M, Huang, Y.H, Bonsor, D, Sundberg, E, Sun, Z.-Y, Petsko, G.A, Kuchroo, V, Blumberg, R.S.
Deposit date:2018-05-19
Release date:2018-12-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:High resolution X-ray and NMR structural study of human T-cell immunoglobulin and mucin domain containing protein-3.
Sci Rep, 8, 2018
4TSM
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BU of 4tsm by Molmil
MBP-fusion protein of PilA1 from C. difficile R20291 residues 26-166
Descriptor: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, maltose-binding protein, pilin chimera, ...
Authors:Piepenbrink, K.H, Sundberg, E.J.
Deposit date:2014-06-19
Release date:2015-01-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Structural and Evolutionary Analyses Show Unique Stabilization Strategies in the Type IV Pili of Clostridium difficile.
Structure, 23, 2015
4PE2
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BU of 4pe2 by Molmil
MBP PilA1 CD160
Descriptor: MALONATE ION, Maltose ABC transporter periplasmic protein,Prepilin-type N-terminal cleavage/methylation domain protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Piepenbrink, K.H, Sundberg, E.J.
Deposit date:2014-04-22
Release date:2015-01-14
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.724 Å)
Cite:Structural and Evolutionary Analyses Show Unique Stabilization Strategies in the Type IV Pili of Clostridium difficile.
Structure, 23, 2015
2IJ0
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BU of 2ij0 by Molmil
Structural basis of T cell specificity and activation by the bacterial superantigen toxic shock syndrome toxin-1
Descriptor: Toxic shock syndrome toxin-1, penultimate affinity-matured variant of hVbeta 2.1, D10
Authors:Moza, B, Varma, A.K, Buonpane, R.A, Zhu, P, Herfst, C.A, Nicholson, M.J, Wilbuer, A.K, Nulifer, S, Wucherpfenning, K.W, McCormick, J.K, Kranz, D.M, Sundberg, E.J.
Deposit date:2006-09-28
Release date:2007-02-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis of T-cell specificity and activation by the bacterial superantigen TSST-1.
Embo J., 26, 2007
6MDV
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BU of 6mdv by Molmil
Crystal structure of Streptococcus pyogenes endo-beta-N-acetylglucosaminidase (EndoS2) with high-mannose glycan
Descriptor: CALCIUM ION, Endo-beta-N-acetylglucosaminidase, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Klontz, E.H, Trastoy, B, Orwenyo, J, Wang, L.X, Guerin, M.E, Sundberg, E.J.
Deposit date:2018-09-05
Release date:2019-02-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular Basis of Broad SpectrumN-Glycan Specificity and Processing of Therapeutic IgG Monoclonal Antibodies by Endoglycosidase S2.
ACS Cent Sci, 5, 2019
6MDS
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BU of 6mds by Molmil
Crystal structure of Streptococcus pyogenes endo-beta-N-acetylglucosaminidase (EndoS2) with complex biantennary glycan
Descriptor: CALCIUM ION, Endo-beta-N-acetylglucosaminidase, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Klontz, E.H, Trastoy, B, Orwenyo, J, Wang, L.X, Guerin, M.E, Sundberg, E.J.
Deposit date:2018-09-05
Release date:2019-02-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular Basis of Broad SpectrumN-Glycan Specificity and Processing of Therapeutic IgG Monoclonal Antibodies by Endoglycosidase S2.
ACS Cent Sci, 5, 2019
4IXJ
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BU of 4ixj by Molmil
The structure of PilJ, a Type IV pilin from Clostridium difficile
Descriptor: Fimbrial protein (Pilin), GLYCEROL, ZINC ION
Authors:Piepenbrink, K.H, Sundberg, E.J, Snyder, G.A.
Deposit date:2013-01-25
Release date:2014-01-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.983 Å)
Cite:Structure of Clostridium difficile PilJ Exhibits Unprecedented Divergence from Known Type IV Pilins.
J.Biol.Chem., 289, 2014
6E58
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BU of 6e58 by Molmil
Crystal structure of Streptococcus pyogenes endo-beta-N-acetylglucosaminidase (EndoS2)
Descriptor: CALCIUM ION, Secreted Endo-beta-N-acetylglucosaminidase (EndoS)
Authors:Klontz, E.H, Trastoy, B, Gunther, S, Guerin, M.E, Sundberg, E.J.
Deposit date:2018-07-19
Release date:2019-02-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Molecular Basis of Broad SpectrumN-Glycan Specificity and Processing of Therapeutic IgG Monoclonal Antibodies by Endoglycosidase S2.
ACS Cent Sci, 5, 2019
6EN3
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BU of 6en3 by Molmil
Crystal structure of full length EndoS from Streptococcus pyogenes in complex with G2 oligosaccharide.
Descriptor: CALCIUM ION, Endo-beta-N-acetylglucosaminidase F2,Multifunctional-autoprocessing repeats-in-toxin, NICKEL (II) ION, ...
Authors:Trastoy, B, Klontz, E.H, Orwenyo, J, Marina, A, Wang, L.X, Sundberg, E.J, Guerin, M.E.
Deposit date:2017-10-04
Release date:2018-06-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.903 Å)
Cite:Structural basis for the recognition of complex-type N-glycans by Endoglycosidase S.
Nat Commun, 9, 2018
5CFV
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BU of 5cfv by Molmil
Fusion of Maltose-binding Protein and PilA from Acinetobacter nosocomialis M2
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCEROL, MAGNESIUM ION, ...
Authors:Piepenbrink, K.H, Sundberg, E.J.
Deposit date:2015-07-08
Release date:2016-07-13
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Diversity in the Type IV Pili of Multidrug-resistant Acinetobacter.
J.Biol.Chem., 291, 2016
6O1C
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BU of 6o1c by Molmil
Alpha-L-fucosidase AlfC D200A mutant in complex with 4-nitrophenyl-a-L-fucopyranoside substrate
Descriptor: 4-nitrophenyl 6-deoxy-alpha-L-galactopyranoside, AlfC
Authors:Klontz, E.H, Sundberg, E.J.
Deposit date:2019-02-19
Release date:2020-02-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and dynamics of an alpha-fucosidase reveal a mechanism for highly efficient IgG transfucosylation.
Nat Commun, 11, 2020
1YCK
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BU of 1yck by Molmil
Crystal structure of human peptidoglycan recognition protein (PGRP-S)
Descriptor: Peptidoglycan recognition protein
Authors:Guan, R, Wang, Q, Sundberg, E.J, Mariuzza, R.A.
Deposit date:2004-12-22
Release date:2005-03-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of human peptidoglycan recognition protein S (PGRP-S) at 1.70 A resolution.
J.Mol.Biol., 347, 2005
2NTT
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BU of 2ntt by Molmil
Crystal Structure of SEK
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Staphylococcal enterotoxin K
Authors:Gunther, S, Varma, A.K, Moza, B, Sundberg, E.J.
Deposit date:2006-11-08
Release date:2007-06-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.561 Å)
Cite:A novel loop domain in superantigens extends their T cell receptor recognition site
J.Mol.Biol., 371, 2007
2ICI
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BU of 2ici by Molmil
Crystal Structure of Streptococcal Pyrogenic Exotoxin I
Descriptor: Exotoxin I, MAGNESIUM ION
Authors:Gunther, S, Varma, A.K, Sundberg, E.J.
Deposit date:2006-09-12
Release date:2007-03-27
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Crystal Structure of the Streptococcal Superantigen SpeI and Functional Role of a Novel Loop Domain in T Cell Activation by Group V Superantigens.
J.Mol.Biol., 367, 2007
5BOW
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BU of 5bow by Molmil
CRYSTAL STRUCTURE OF IL-38
Descriptor: 1,2-ETHANEDIOL, Interleukin-1 family member 10
Authors:Guenther, S, Sundberg, E.J.
Deposit date:2015-05-27
Release date:2016-06-01
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Crystal Structure of Interleukin-38
To Be Published

222036

數據於2024-07-03公開中

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