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PDB: 232 results

3W5R
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BU of 3w5r by Molmil
Crystal structure of complexes of vitamin D receptor ligand binding domain with lithocholic acid derivatives
Descriptor: (3beta,5beta,9beta)-3-(acetyloxy)cholan-24-oic acid, Mediator of RNA polymerase II transcription subunit 1, Vitamin D3 receptor
Authors:Masuno, H, Ikura, T, Ito, N.
Deposit date:2013-02-06
Release date:2013-06-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of complexes of vitamin D receptor ligand-binding domain with lithocholic acid derivatives.
J.Lipid Res., 54, 2013
1S35
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BU of 1s35 by Molmil
Crystal Structure of Repeats 8 and 9 of Human Erythroid Spectrin
Descriptor: SULFATE ION, Spectrin beta chain, erythrocyte
Authors:Kusunoki, H, MacDonald, R.I, Mondragon, A.
Deposit date:2004-01-12
Release date:2004-04-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insights into the stability and flexibility of unusual erythroid spectrin repeats
Structure, 12, 2004
7EH9
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BU of 7eh9 by Molmil
Crystal structure of the flagellar hook cap fragment from Salmonella enterica serovar Typhimurium
Descriptor: Basal-body rod modification protein FlgD
Authors:Matsunami, H, Yoon, Y.-H, Imada, K, Namba, K, Samatey, F.A.
Deposit date:2021-03-29
Release date:2021-11-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the bacterial flagellar hook cap provides insights into a hook assembly mechanism
Commun Biol, 4, 2021
7EHA
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Crystal structure of the flagellar hook cap from Salmonella enterica serovar Typhimurium
Descriptor: Basal-body rod modification protein FlgD
Authors:Matsunami, H, Yoon, Y.-H, Imada, K, Namba, K, Samatey, F.A.
Deposit date:2021-03-29
Release date:2021-11-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure of the bacterial flagellar hook cap provides insights into a hook assembly mechanism
Commun Biol, 4, 2021
1U4Q
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BU of 1u4q by Molmil
Crystal Structure of Repeats 15, 16 and 17 of Chicken Brain Alpha Spectrin
Descriptor: Spectrin alpha chain, brain
Authors:Kusunoki, H, Minasov, G, MacDonald, R.I, Mondragon, A.
Deposit date:2004-07-26
Release date:2004-10-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Independent Movement, Dimerization and Stability of Tandem Repeats of Chicken Brain alpha-Spectrin
J.Mol.Biol., 344, 2004
1U5P
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BU of 1u5p by Molmil
Crystal Structure of Repeats 15 and 16 of Chicken Brain Alpha Spectrin
Descriptor: PHOSPHATE ION, POTASSIUM ION, Spectrin alpha chain, ...
Authors:Kusunoki, H, Minasov, G, MacDonald, R.I, Mondragon, A.
Deposit date:2004-07-28
Release date:2004-10-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Independent Movement, Dimerization and Stability of Tandem Repeats of Chicken Brain alpha-Spectrin
J.Mol.Biol., 344, 2004
3TEE
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BU of 3tee by Molmil
Crystal Structure of Salmonella FlgA in open form
Descriptor: CHLORIDE ION, Flagella basal body P-ring formation protein flgA, GLYCEROL
Authors:Matsunami, H, Samatey, F.A, Namba, K.
Deposit date:2011-08-12
Release date:2012-08-15
Last modified:2016-07-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural flexibility of the periplasmic protein, FlgA, regulates flagellar P-ring assembly in Salmonella enterica
Sci Rep, 6, 2016
2EJY
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BU of 2ejy by Molmil
Solution structure of the p55 PDZ T85C domain complexed with the glycophorin C F127C peptide
Descriptor: 55 kDa erythrocyte membrane protein, Glycophorin C
Authors:Kusunoki, H, Kohno, T.
Deposit date:2007-03-22
Release date:2008-02-12
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:Structural insight into the interaction between the p55 PDZ domain and glycophorin C
Biochem.Biophys.Res.Commun., 359, 2007
2EV8
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BU of 2ev8 by Molmil
Solution structure of the erythroid p55 PDZ domain
Descriptor: 55 kDa erythrocyte membrane protein
Authors:Kusunoki, H, Kohno, T.
Deposit date:2005-10-31
Release date:2006-10-10
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of human erythroid p55 PDZ domain
Proteins, 64, 2006
5H52
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BU of 5h52 by Molmil
Structure of Titanium-bound human serum transferrin
Descriptor: CITRIC ACID, MALONATE ION, Serotransferrin, ...
Authors:Curtin, J.P, Wang, M, Sun, H.
Deposit date:2016-11-04
Release date:2017-11-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:The role of citrate, lactate and transferrin in determining titanium release from surgical devices into human serum.
J. Biol. Inorg. Chem., 23, 2018
6LGW
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BU of 6lgw by Molmil
Structure of Rabies virus glycoprotein in complex with neutralizing antibody 523-11 at acidic pH
Descriptor: Glycoprotein, scFv 523-11
Authors:Yang, F.L, Lin, S, Ye, F, Yang, J, Qi, J.X, Chen, Z.J, Lin, X, Wang, J.C, Yue, D, Cheng, Y.W, Chen, Z.M, Chen, H, You, Y, Zhang, Z.L, Yang, Y, Yang, M, Sun, H.L, Li, Y.H, Cao, Y, Yang, S.Y, Wei, Y.Q, Gao, G.F, Lu, G.W.
Deposit date:2019-12-06
Release date:2020-02-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.9037 Å)
Cite:Structural Analysis of Rabies Virus Glycoprotein Reveals pH-Dependent Conformational Changes and Interactions with a Neutralizing Antibody.
Cell Host Microbe, 27, 2020
6LGX
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BU of 6lgx by Molmil
Structure of Rabies virus glycoprotein at basic pH
Descriptor: Glycoprotein,Glycoprotein,Glycoprotein
Authors:Yang, F.L, Lin, S, Ye, F, Yang, J, Qi, J.X, Chen, Z.J, Lin, X, Wang, J.C, Yue, D, Cheng, Y.W, Chen, Z.M, Chen, H, You, Y, Zhang, Z.L, Yang, Y, Yang, M, Sun, H.L, Li, Y.H, Cao, Y, Yang, S.Y, Wei, Y.Q, Gao, G.F, Lu, G.W.
Deposit date:2019-12-06
Release date:2020-02-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.097 Å)
Cite:Structural Analysis of Rabies Virus Glycoprotein Reveals pH-Dependent Conformational Changes and Interactions with a Neutralizing Antibody.
Cell Host Microbe, 27, 2020
6LI6
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BU of 6li6 by Molmil
Crystal structure of MCR-1-S treated by Au(PEt3)Cl
Descriptor: GOLD ION, Probable phosphatidylethanolamine transferase Mcr-1, TRIETHYLPHOSPHANE
Authors:Zhang, Q, Wang, M, Sun, H.
Deposit date:2019-12-10
Release date:2020-09-16
Last modified:2020-10-28
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Resensitizing carbapenem- and colistin-resistant bacteria to antibiotics using auranofin.
Nat Commun, 11, 2020
4X1D
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BU of 4x1d by Molmil
Ytterbium-bound human serum transferrin
Descriptor: GLYCEROL, MALONATE ION, Serotransferrin, ...
Authors:Wang, M, Zhang, H, Sun, H.
Deposit date:2014-11-24
Release date:2015-04-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:"Anion clamp" allows flexible protein to impose coordination geometry on metal ions
Chem.Commun.(Camb.), 51, 2015
6KV9
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BU of 6kv9 by Molmil
MoeE5 in complex with UDP-glucuronic acid and NAD
Descriptor: MoeE5, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, URIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID
Authors:Ko, T.-P, Liu, W, Sun, H, Liu, W, Chen, C.-C, Guo, R.-T.
Deposit date:2019-09-03
Release date:2019-11-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structure of an antibiotic-synthesizing UDP-glucuronate 4-epimerase MoeE5 in complex with substrate.
Biochem.Biophys.Res.Commun., 521, 2020
4X1B
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BU of 4x1b by Molmil
Human serum transferrin with ferric ion bound at the C-lobe only
Descriptor: FE (III) ION, GLYCEROL, MALONATE ION, ...
Authors:Wang, M, Zhang, H, Sun, H.
Deposit date:2014-11-24
Release date:2015-04-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:"Anion clamp" allows flexible protein to impose coordination geometry on metal ions
Chem.Commun.(Camb.), 51, 2015
7YP2
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BU of 7yp2 by Molmil
Cryo-EM structure of EBV gHgL-gp42 in complex with mAb 6H2 (localized refinement)
Descriptor: 6H2 heavy chain, 6H2 light chain, Envelope glycoprotein H
Authors:Liu, L, Sun, H, Jiang, Y, Hong, J, Zheng, Q, Li, S, Chen, Y, Xia, N.
Deposit date:2022-08-02
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:Non-overlapping epitopes on the gHgL-gp42 complex for the rational design of a triple-antibody cocktail against EBV infection.
Cell Rep Med, 4, 2023
7YP1
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BU of 7yp1 by Molmil
Cryo-EM structure of EBV gHgL-gp42 in complex with mAb 10E4 (localized refinement)
Descriptor: 10E4 heavy chain, 10E4 light chain, EBV gH, ...
Authors:Liu, L, Sun, H, Jiang, Y, Hong, J, Zheng, Q, Li, S, Chen, Y, Xia, N.
Deposit date:2022-08-02
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (3.54 Å)
Cite:Non-overlapping epitopes on the gHgL-gp42 complex for the rational design of a triple-antibody cocktail against EBV infection.
Cell Rep Med, 4, 2023
7YOY
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BU of 7yoy by Molmil
Cryo-EM structure of EBV gHgL-gp42 in complex with mAbs 3E8 and 5E3 (localized refinement)
Descriptor: 3E8 heavy chain, 3E8 light chain, 5E3 heavy chain, ...
Authors:Liu, L, Sun, H, Jiang, Y, Hong, J, Zheng, Q, Li, S, Chen, Y, Xia, N.
Deposit date:2022-08-02
Release date:2024-01-31
Method:ELECTRON MICROSCOPY (3.64 Å)
Cite:Non-overlapping epitopes on the gHgL-gp42 complex for the rational design of a triple-antibody cocktail against EBV infection.
Cell Rep Med, 4, 2023
7CGC
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BU of 7cgc by Molmil
Silver-bound E. coli Malate dehydrogenase (C113 and C251)
Descriptor: Malate dehydrogenase, SILVER ION
Authors:Wang, H, Wang, M, Sun, H.
Deposit date:2020-07-01
Release date:2020-09-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.548 Å)
Cite:Atomic differentiation of silver binding preference in protein targets: Escherichia coli malate dehydrogenase as a paradigm.
Chem Sci, 11, 2020
7CGD
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BU of 7cgd by Molmil
Silver-bound E.coli malate dehydrogenase
Descriptor: Malate dehydrogenase, SILVER ION
Authors:Wang, H, Wang, M, Sun, H.
Deposit date:2020-07-01
Release date:2020-09-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Atomic differentiation of silver binding preference in protein targets: Escherichia coli malate dehydrogenase as a paradigm.
Chem Sci, 11, 2020
7CB0
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BU of 7cb0 by Molmil
The apo 6-phosphogluconate dehydrogenase from Staphylococcus aureus (strain Newman)
Descriptor: 6-phosphogluconate dehydrogenase, decarboxylating
Authors:Wang, H, Wang, M, Sun, H.
Deposit date:2020-06-10
Release date:2021-04-07
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Multi-target mode of action of silver against Staphylococcus aureus endows it with capability to combat antibiotic resistance.
Nat Commun, 12, 2021
7CB5
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BU of 7cb5 by Molmil
The 6-phosphogluconate dehydrogenase from Staphylococcus aureus (6-phosphogluconate bound)
Descriptor: 6-PHOSPHOGLUCONIC ACID, 6-phosphogluconate dehydrogenase, decarboxylating
Authors:Wang, H, Wang, M, Sun, H.
Deposit date:2020-06-10
Release date:2021-04-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Multi-target mode of action of silver against Staphylococcus aureus endows it with capability to combat antibiotic resistance.
Nat Commun, 12, 2021
7CB6
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BU of 7cb6 by Molmil
The silver-bound 6-phosphogluconate dehydrogenase from Staphylococcus aureus (strain Newman)
Descriptor: 6-phosphogluconate dehydrogenase, decarboxylating, SILVER ION
Authors:Wang, H, Wang, M, Sun, H.
Deposit date:2020-06-10
Release date:2021-04-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Multi-target mode of action of silver against Staphylococcus aureus endows it with capability to combat antibiotic resistance.
Nat Commun, 12, 2021
2XFL
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BU of 2xfl by Molmil
Induced-fit and allosteric effects upon polyene binding revealed by crystal structures of the Dynemicin thioesterase
Descriptor: DYNE7
Authors:Liew, C.W, Sharff, A, Kotaka, M, Kong, R, Sun, H, Bricogne, G, Liang, Z, Lescar, J.
Deposit date:2010-05-26
Release date:2010-10-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Induced-Fit Upon Ligand Binding Revealed by Crystal Structures of the Hot-Dog Fold Thioesterase in Dynemicin Biosynthesis.
J.Mol.Biol., 404, 2010

224004

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