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PDB: 40 results

7BQE
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BU of 7bqe by Molmil
Solution NMR structure of NF3; de novo designed protein with a novel fold
Descriptor: NF3
Authors:Kobayashi, N, Sugiki, T, Fujiwara, T, Minami, S, Koga, R, Chikenji, G, Koga, N.
Deposit date:2020-03-24
Release date:2021-03-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Exploration of novel alpha-beta-protein folds through de novo design
Nat.Struct.Mol.Biol., 2023
7VX3
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BU of 7vx3 by Molmil
OXA-58 crystal structure of acylated meropenem complex 2
Descriptor: (2S,3R,4S)-4-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-2-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-3-methyl-3,4-dihydro-2H-pyrrole-5-carboxylic acid, (4R,5S)-3-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-4-methyl-4,5-d ihydro-1H-pyrrole-2-carboxylic acid, Beta-lactamase, ...
Authors:Saino, H, Sugiyabu, T, Miyano, M.
Deposit date:2021-11-12
Release date:2022-11-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:OXA-58 crystal structure of acylated meropenem complex 2
To be published
7VX6
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BU of 7vx6 by Molmil
OXA-58 crystal structure of acylated meropenem complex 2
Descriptor: (2S,3R,4S)-4-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-2-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-3-methyl-3,4-dihydro-2H-pyrrole-5-carboxylic acid, (4R,5S)-3-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-4-methyl-4,5-d ihydro-1H-pyrrole-2-carboxylic acid, Beta-lactamase, ...
Authors:Saino, H, Sugiyabu, T, Miyano, M.
Deposit date:2021-11-12
Release date:2022-11-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:OXA-58 crystal structure of acylated meropenem complex 2
To be published
7BPP
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BU of 7bpp by Molmil
Solution NMR structure of NF5; de novo designed protein with a novel fold
Descriptor: NF5
Authors:Kobayashi, N, Sugiki, T, Fujiwara, T, Minami, S, Koga, R, Chikenji, G, Koga, N.
Deposit date:2020-03-23
Release date:2021-03-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Exploration of novel alpha-beta-protein folds through de novo design
Nat.Struct.Mol.Biol., 2023
7BPM
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BU of 7bpm by Molmil
Solution NMR structure of NF2; de novo designed protein with a novel fold
Descriptor: NF2
Authors:Kobayashi, N, Sugiki, T, Fujiwara, T, Minami, S, Koga, R, Chikenji, G, Koga, N.
Deposit date:2020-03-23
Release date:2021-03-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Exploration of novel alpha-beta-protein folds through de novo design
Nat.Struct.Mol.Biol., 2023
7BQD
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BU of 7bqd by Molmil
Solution NMR structure of NF8 (knot fold); de novo designed protein with a novel fold
Descriptor: NF8
Authors:Kobayashi, N, Sugiki, T, Fujiwara, T, Minami, S, Koga, R, Chikenji, G, Koga, N.
Deposit date:2020-03-24
Release date:2021-03-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Exploration of novel alpha-beta-protein folds through de novo design
Nat.Struct.Mol.Biol., 2023
7BPN
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BU of 7bpn by Molmil
Solution NMR structure of NF7; de novo designed protein with a novel fold
Descriptor: NF7
Authors:Kobayashi, N, Sugiki, T, Fujiwara, T, Minami, S, Koga, R, Chikenji, G, Koga, N.
Deposit date:2020-03-23
Release date:2021-03-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Exploration of novel alpha-beta-protein folds through de novo design
Nat.Struct.Mol.Biol., 2023
7BPL
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BU of 7bpl by Molmil
Solution NMR structure of NF1; de novo designed protein with a novel fold
Descriptor: NF1
Authors:Kobayashi, N, Sugiki, T, Fujiwara, T, Minami, S, Koga, R, Chikenji, G, Koga, N.
Deposit date:2020-03-23
Release date:2021-03-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Exploration of novel alpha-beta-protein folds through de novo design
Nat.Struct.Mol.Biol., 2023
2D3B
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BU of 2d3b by Molmil
Crystal Structure of the Maize Glutamine Synthetase complexed with AMPPNP and Methionine sulfoximine
Descriptor: (2S)-2-AMINO-4-(METHYLSULFONIMIDOYL)BUTANOIC ACID, MANGANESE (II) ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Unno, H, Uchida, T, Sugawara, H, Kurisu, G, Sugiyama, T, Yamaya, T, Sakakibara, H, Hase, T, Kusunoki, M.
Deposit date:2005-09-26
Release date:2006-07-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Atomic Structure of Plant Glutamine Synthetase: A KEY ENZYME FOR PLANT PRODUCTIVITY
J.Biol.Chem., 281, 2006
2D3A
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BU of 2d3a by Molmil
Crystal Structure of the Maize Glutamine Synthetase complexed with ADP and Methionine sulfoximine Phosphate
Descriptor: ADENOSINE-5'-DIPHOSPHATE, L-METHIONINE-S-SULFOXIMINE PHOSPHATE, MANGANESE (II) ION, ...
Authors:Unno, H, Uchida, T, Sugawara, H, Kurisu, G, Sugiyama, T, Yamaya, T, Sakakibara, H, Hase, T, Kusunoki, M.
Deposit date:2005-09-26
Release date:2006-07-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Atomic Structure of Plant Glutamine Synthetase: A KEY ENZYME FOR PLANT PRODUCTIVITY
J.Biol.Chem., 281, 2006
2D3C
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BU of 2d3c by Molmil
Crystal Structure of the Maize Glutamine Synthetase complexed with ADP and Phosphinothricin Phosphate
Descriptor: (2S)-2-AMINO-4-[METHYL(PHOSPHONOOXY)PHOSPHORYL]BUTANOIC ACID, ADENOSINE-5'-DIPHOSPHATE, MANGANESE (II) ION, ...
Authors:Unno, H, Uchida, T, Sugawara, H, Kurisu, G, Sugiyama, T, Yamaya, T, Sakakibara, H, Hase, T, Kusunoki, M.
Deposit date:2005-09-26
Release date:2006-07-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.81 Å)
Cite:Atomic Structure of Plant Glutamine Synthetase: A KEY ENZYME FOR PLANT PRODUCTIVITY
J.Biol.Chem., 281, 2006
7XKM
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BU of 7xkm by Molmil
Crystal structure of DNA-Ag(I) rod comprising a one-dimensional array of 11 silver ions
Descriptor: DNA (5'-D(*CP*GP*CP*GP*CP*(BRU)P*CP*(BRU)P*CP*GP*CP*G)-3'), SILVER ION
Authors:Kondo, J, Ono, A, Atsugi, T.
Deposit date:2022-04-20
Release date:2022-07-06
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:A Novel Ag I -DNA Rod Comprising a One-Dimensional Array of 11 Silver Ions within a Double Helical Structure.
Angew.Chem.Int.Ed.Engl., 61, 2022
3WBL
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BU of 3wbl by Molmil
Crystal structure of CDK2 in complex with pyrazolopyrimidine inhibitor
Descriptor: ACETATE ION, Cyclin-dependent kinase 2, N~7~-(4-ethoxyphenyl)-6-methyl-N~5~-[(3S)-piperidin-3-yl]pyrazolo[1,5-a]pyrimidine-5,7-diamine
Authors:Fujino, A, Fukushima, K, Kubota, T, Kosugi, T, Takimoto-Kamimura, M.
Deposit date:2013-05-20
Release date:2013-10-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of human cyclin-dependent kinase-2 complex with MK2 inhibitor TEI-I01800: insight into the selectivity.
J.SYNCHROTRON RADIAT., 20, 2013
3ABG
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BU of 3abg by Molmil
X-ray Crystal Analysis of Bilirubin Oxidase from Myrothecium verrucaria at 2.3 angstrom Resolution using a Twin Crystal
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Bilirubin oxidase, COPPER (II) ION, ...
Authors:Mizutani, K, Toyoda, M, Sagara, K, Takahashi, N, Sato, A, Kamitaka, Y, Tsujimura, S, Nakanishi, Y, Sugiura, T, Yamaguchi, S, Kano, K, Mikami, B.
Deposit date:2009-12-10
Release date:2010-08-18
Last modified:2023-07-26
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-ray analysis of bilirubin oxidase from Myrothecium verrucaria at 2.3 A resolution using a twinned crystal
Acta Crystallogr.,Sect.F, 66, 2010
5BOH
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BU of 5boh by Molmil
Crystal Structure of OXA-58 with the Substrate-Binding Cleft in a Closed State
Descriptor: Beta-lactamase, SULFATE ION
Authors:Saino, H, Sugiyabu, T, Miyano, M.
Deposit date:2015-05-27
Release date:2015-12-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of OXA-58 with the Substrate-Binding Cleft in a Closed State: Insights into the Mobility and Stability of the OXA-58 Structure
Plos One, 10, 2015
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