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PDB: 283 results

6C0P
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BU of 6c0p by Molmil
Crystal structure of HIV-1 E138K mutant reverse transcriptase in complex with non-nucleoside inhibitor 25a
Descriptor: 1,2-ETHANEDIOL, 4-({4-[(4-{4-[(E)-2-cyanoethenyl]-2,6-dimethylphenoxy}thieno[3,2-d]pyrimidin-2-yl)amino]piperidin-1-yl}methyl)benzene-1-sulfonamide, DIMETHYL SULFOXIDE, ...
Authors:Yang, Y, Nguyen, L.A, Smithline, Z.B, Steitz, T.A.
Deposit date:2018-01-01
Release date:2018-08-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis for potent and broad inhibition of HIV-1 RT by thiophene[3,2-d]pyrimidine non-nucleoside inhibitors.
Elife, 7, 2018
5IPL
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BU of 5ipl by Molmil
SigmaS-transcription initiation complex with 4-nt nascent RNA
Descriptor: DIPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Liu, B, Zuo, Y, Steitz, T.A.
Deposit date:2016-03-09
Release date:2016-03-30
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structures of E. coli sigma S-transcription initiation complexes provide new insights into polymerase mechanism.
Proc.Natl.Acad.Sci.USA, 113, 2016
5IPM
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BU of 5ipm by Molmil
SigmaS-transcription initiation complex with 4-nt nascent RNA
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Liu, B, Zuo, Y, Steitz, T.A.
Deposit date:2016-03-09
Release date:2016-03-30
Last modified:2016-06-22
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Structures of E. coli sigma S-transcription initiation complexes provide new insights into polymerase mechanism.
Proc.Natl.Acad.Sci.USA, 113, 2016
397D
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BU of 397d by Molmil
A 1.3 A RESOLUTION CRYSTAL STRUCTURE OF THE HIV-1 TRANS-ACTIVATION RESPONSE REGION RNA STEM REVEALS A METAL ION-DEPENDENT BULGE CONFORMATION
Descriptor: CALCIUM ION, RNA (5'-R(*GP*CP*UP*CP*UP*CP*UP*GP*GP*CP*CP*C)-3'), RNA (5'-R(*GP*GP*CP*CP*AP*GP*AP*UP*CP*UP*GP*AP*GP*CP*G)-3')
Authors:Ippolito, J.A, Steitz, T.A.
Deposit date:1998-04-30
Release date:1998-09-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:A 1.3-A resolution crystal structure of the HIV-1 trans-activation response region RNA stem reveals a metal ion-dependent bulge conformation.
Proc.Natl.Acad.Sci.USA, 95, 1998
2GM4
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BU of 2gm4 by Molmil
An activated, tetrameric gamma-delta resolvase: Hin chimaera bound to cleaved DNA
Descriptor: 5'-D(*CP*AP*GP*TP*GP*TP*CP*CP*GP*AP*TP*AP*AP*TP*TP*TP*AP*TP*AP*AP*A)-3', 5'-D(*TP*TP*AP*TP*CP*GP*GP*AP*CP*AP*CP*TP*G)-3', Transposon gamma-delta resolvase
Authors:Kamtekar, S, Ho, R.S, Li, W, Steitz, T.A.
Deposit date:2006-04-05
Release date:2006-06-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Implications of structures of synaptic tetramers of gamma delta resolvase for the mechanism of recombination.
Proc.Natl.Acad.Sci.Usa, 103, 2006
1N8R
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BU of 1n8r by Molmil
Structure of large ribosomal subunit in complex with virginiamycin M
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L10e, 50S ribosomal protein L13P, ...
Authors:Hansen, J.L, Moore, P.B, Steitz, T.A.
Deposit date:2002-11-21
Release date:2003-07-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of Five Antibiotics Bound at the Peptidyl Transferase Center of the Large Ribosomal Subunit
J.Mol.Biol., 330, 2003
1NJI
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BU of 1nji by Molmil
Structure of chloramphenicol bound to the 50S ribosomal subunit
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L10e, 50S ribosomal protein L13P, ...
Authors:Hansen, J.L, Moore, P.B, Steitz, T.A.
Deposit date:2002-12-31
Release date:2003-07-22
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of Five Antibiotics Bound at the Peptidyl Transferase Center of the Large Ribosomal Subunit
J.Mol.Biol., 330, 2003
1DPI
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BU of 1dpi by Molmil
STRUCTURE OF LARGE FRAGMENT OF ESCHERICHIA COLI DNA POLYMERASE I COMPLEXED WITH D/TMP
Descriptor: DNA POLYMERASE I KLENOW FRAGMENT, ZINC ION
Authors:Beese, L, Ollis, D, Steitz, T.
Deposit date:1987-08-11
Release date:1987-10-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of large fragment of Escherichia coli DNA polymerase I complexed with dTMP.
Nature, 313, 1985
3I56
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BU of 3i56 by Molmil
Co-crystal structure of Triacetyloleandomcyin Bound to the Large Ribosomal Subunit
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ...
Authors:Gurel, G, Blaha, G, Steitz, T.A, Moore, P.B.
Deposit date:2009-07-03
Release date:2010-03-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structures of triacetyloleandomycin and mycalamide A bind to the large ribosomal subunit of Haloarcula marismortui.
Antimicrob.Agents Chemother., 53, 2009
4M6F
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BU of 4m6f by Molmil
Dimer of the G-Segment Invertase bound to a DNA substrate
Descriptor: DNA-invertase, gix site analog
Authors:Ritacco, C.J, Wang, J, Steitz, T.A.
Deposit date:2013-08-09
Release date:2014-03-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (4.99 Å)
Cite:Exploiting large non-isomorphous differences for phase determination of a G-segment invertase-DNA complex.
Acta Crystallogr.,Sect.D, 70, 2014
1GDR
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BU of 1gdr by Molmil
MODEL FOR A DNA MEDIATED SYNAPTIC COMPLEX SUGGESTED BY CRYSTAL PACKING OF GAMMA DELTA RESOLVASE SUBUNITS
Descriptor: GAMMA DELTA-RESOLVASE
Authors:Rice, P.A, Steitz, T.A.
Deposit date:1993-08-31
Release date:1994-04-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Model for a DNA-mediated synaptic complex suggested by crystal packing of gamma delta resolvase subunits.
EMBO J., 13, 1994
3G6E
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BU of 3g6e by Molmil
Co-crystal structure of Homoharringtonine bound to the large ribosomal subunit
Descriptor: (3beta)-O~3~-[(2R)-2,6-dihydroxy-2-(2-methoxy-2-oxoethyl)-6-methylheptanoyl]cephalotaxine, 23S ribosomal RNA, 50S ribosomal protein L10E, ...
Authors:Gurel, G, Blaha, G, Moore, P.B, Steitz, T.A.
Deposit date:2009-02-06
Release date:2009-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:U2504 determines the species specificity of the A-site cleft antibiotics: the structures of tiamulin, homoharringtonine, and bruceantin bound to the ribosome.
J.Mol.Biol., 389, 2009
3HL2
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BU of 3hl2 by Molmil
The crystal structure of the human SepSecS-tRNASec complex
Descriptor: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, Monothiophosphate, O-phosphoseryl-tRNA(Sec) selenium transferase, ...
Authors:Palioura, S, Steitz, T.A, Soll, D, Simonovic, M.
Deposit date:2009-05-26
Release date:2009-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:The human SepSecS-tRNASec complex reveals the mechanism of selenocysteine formation.
Science, 325, 2009
3I55
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BU of 3i55 by Molmil
Co-crystal structure of Mycalamide A Bound to the Large Ribosomal Subunit
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ...
Authors:Gurel, G, Blaha, G, Steitz, T.A, Moore, P.B.
Deposit date:2009-07-03
Release date:2010-03-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Structures of triacetyloleandomycin and mycalamide A bind to the large ribosomal subunit of Haloarcula marismortui.
Antimicrob.Agents Chemother., 53, 2009
3G4S
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BU of 3g4s by Molmil
Co-crystal structure of Tiamulin bound to the large ribosomal subunit
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L10, 50S ribosomal protein L10e, ...
Authors:Gurel, G, Blaha, G, Moore, P.B, Steitz, T.A.
Deposit date:2009-02-04
Release date:2009-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:U2504 determines the species specificity of the A-site cleft antibiotics: the structures of tiamulin, homoharringtonine, and bruceantin bound to the ribosome.
J.Mol.Biol., 389, 2009
3G71
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BU of 3g71 by Molmil
Co-crystal structure of Bruceantin bound to the large ribosomal subunit
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ...
Authors:Gurel, G, Blaha, G, Moore, P.B, Steitz, T.A.
Deposit date:2009-02-09
Release date:2009-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:U2504 determines the species specificity of the A-site cleft antibiotics: the structures of tiamulin, homoharringtonine, and bruceantin bound to the ribosome.
J.Mol.Biol., 389, 2009
2GM5
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BU of 2gm5 by Molmil
An activated, truncated gamma-delta resolvase tetramer
Descriptor: Transposon gamma-delta resolvase
Authors:Kamtekar, S, Ho, R.S, Li, W, Steitz, T.A.
Deposit date:2006-04-05
Release date:2006-06-27
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Implications of structures of synaptic tetramers of gamma delta resolvase for the mechanism of recombination.
Proc.Natl.Acad.Sci.Usa, 103, 2006
4KJZ
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BU of 4kjz by Molmil
Crystal Structure of Thermus Thermophilus IF2, Apo and GDP-bound Forms (2-474)
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Translation initiation factor IF-2
Authors:Eiler, D.R, Lin, J, Steitz, T.A.
Deposit date:2013-05-04
Release date:2013-09-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Initiation factor 2 crystal structure reveals a different domain organization from eukaryotic initiation factor 5B and mechanism among translational GTPases.
Proc.Natl.Acad.Sci.USA, 110, 2013
1REA
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BU of 1rea by Molmil
STRUCTURE OF THE RECA PROTEIN-ADP COMPLEX
Descriptor: ADENOSINE-5'-DIPHOSPHATE, REC A
Authors:Story, R.M, Steitz, T.A.
Deposit date:1991-12-19
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the recA protein-ADP complex.
Nature, 355, 1992
2PYJ
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BU of 2pyj by Molmil
Phi29 DNA polymerase complexed with primer-template DNA and incoming nucleotide substrates (ternary complex)
Descriptor: 1,2-ETHANEDIOL, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-d(ACACGTAAGCAGTC)-3', ...
Authors:Berman, A.J, Kamtekar, S, Goodman, J.L, Lazaro, J.M, de Vega, M, Blanco, L, Salas, M, Steitz, T.A.
Deposit date:2007-05-16
Release date:2007-07-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structures of phi29 DNA polymerase complexed with substrate: the mechanism of translocation in B-family polymerases
Embo J., 26, 2007
1IG9
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BU of 1ig9 by Molmil
Structure of the Replicating Complex of a Pol Alpha Family DNA Polymerase
Descriptor: 5'-D(*AP*CP*AP*GP*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3', 5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*CP*(DOC))-3', CALCIUM ION, ...
Authors:Franklin, M.C, Wang, J, Steitz, T.A.
Deposit date:2001-04-17
Release date:2001-06-11
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the Replicating Complex of a Pol Alpha Family DNA Polymerase
Cell(Cambridge,Mass.), 105, 2001
4M4W
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BU of 4m4w by Molmil
Mechanistic implications for the bacterial primosome assembly of the structure of a helicase-helicase loader complex
Descriptor: DNA primase, Primosomal protein DnaI, Replicative helicase
Authors:Liu, B, Eliason, W.K, Steitz, T.A.
Deposit date:2013-08-07
Release date:2013-09-25
Last modified:2013-10-02
Method:X-RAY DIFFRACTION (6.1 Å)
Cite:Structure of a helicase-helicase loader complex reveals insights into the mechanism of bacterial primosome assembly.
Nat Commun, 4, 2013
3CMA
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BU of 3cma by Molmil
The structure of CCA and CCA-Phe-Cap-Bio bound to the large ribosomal subunit of Haloarcula marismortui
Descriptor: 23S RIBOSOMAL RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ...
Authors:Simonovic, M, Steitz, T.A.
Deposit date:2008-03-21
Release date:2008-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Peptidyl-CCA deacylation on the ribosome promoted by induced fit and the O3'-hydroxyl group of A76 of the unacylated A-site tRNA.
Rna, 14, 2008
1TAU
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BU of 1tau by Molmil
TAQ POLYMERASE (E.C.2.7.7.7)/DNA/B-OCTYLGLUCOSIDE COMPLEX
Descriptor: 2-O-octyl-beta-D-glucopyranose, DNA (5'-D(*CP*GP*GP*AP*TP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*AP*TP*CP*CP*G)-3'), ...
Authors:Eom, S.H, Wang, J, Steitz, T.A.
Deposit date:1996-06-17
Release date:1997-04-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of Taq ploymerase with DNA at the polymerase active site.
Nature, 382, 1996
3OVB
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BU of 3ovb by Molmil
How the CCA-adding Enzyme Selects Adenine over Cytosine in Position 76 of tRNA
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, CCA-Adding Enzyme, ...
Authors:Pan, B.C, Xiong, Y, Steitz, T.A.
Deposit date:2010-09-16
Release date:2010-12-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:How the CCA-Adding Enzyme Selects Adenine over Cytosine at Position 76 of tRNA.
Science, 330, 2010

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