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PDB: 109 results

6DND
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Crystal structure of wild-type (WT) human Glutamate oxaloacetate transaminase 1 (GOT1)
Descriptor: Aspartate aminotransferase, cytoplasmic, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Assar, Z, Holt, M.C, Stein, A.J, Lairson, L, Lyssiotis, C.A.
Deposit date:2018-06-06
Release date:2018-11-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Biochemical Characterization and Structure-Based Mutational Analysis Provide Insight into the Binding and Mechanism of Action of Novel Aspartate Aminotransferase Inhibitors.
Biochemistry, 57, 2018
6DNB
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Crystal structure of T110A:S256A mutant human Glutamate oxaloacetate transaminase 1 (GOT1)
Descriptor: Aspartate aminotransferase, cytoplasmic, GLYCEROL, ...
Authors:Assar, Z, Holt, M.C, Stein, A.J, Lairson, L, Lyssiotis, C.A.
Deposit date:2018-06-06
Release date:2018-11-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Biochemical Characterization and Structure-Based Mutational Analysis Provide Insight into the Binding and Mechanism of Action of Novel Aspartate Aminotransferase Inhibitors.
Biochemistry, 57, 2018
2KOG
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BU of 2kog by Molmil
lipid-bound synaptobrevin solution NMR structure
Descriptor: Vesicle-associated membrane protein 2
Authors:Ellena, J.F, Liang, B, Wiktor, M, Stein, A, Cafiso, D.S, Jahn, R, Tamm, L.K.
Deposit date:2009-09-22
Release date:2009-12-01
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Dynamic structure of lipid-bound synaptobrevin suggests a nucleation-propagation mechanism for trans-SNARE complex formation.
Proc.Natl.Acad.Sci.USA, 106, 2009
5IPR
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BU of 5ipr by Molmil
Cryo-EM structure of GluN1/GluN2B NMDA receptor in the DCKA/D-APV-bound conformation, state 3
Descriptor: Ionotropic glutamate receptor subunit NR2B, N-methyl-D-aspartate receptor subunit NR1-8a
Authors:Zhu, S, Stein, A.R, Yoshioka, C, Lee, C.H, Goehring, A, Mchaourab, S.H, Gouaux, E.
Deposit date:2016-03-09
Release date:2016-04-20
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (14.1 Å)
Cite:Mechanism of NMDA Receptor Inhibition and Activation.
Cell, 165, 2016
5IPQ
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BU of 5ipq by Molmil
Cryo-EM structure of GluN1/GluN2B NMDA receptor in the DCKA/D-APV-bound conformation, state 2
Descriptor: Ionotropic glutamate receptor subunit NR2B, N-methyl-D-aspartate receptor subunit NR1-8a
Authors:Zhu, S, Stein, A.R, Yoshioka, C, Lee, C.H, Goehring, A, Mchaourab, S.H, Gouaux, E.
Deposit date:2016-03-09
Release date:2016-04-20
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (13.5 Å)
Cite:Mechanism of NMDA Receptor Inhibition and Activation.
Cell, 165, 2016
4WZ0
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BU of 4wz0 by Molmil
Crystal structure of U-box 1 of LubX / LegU2 / Lpp2887 from Legionella pneumophila str. Paris
Descriptor: E3 ubiquitin-protein ligase LubX
Authors:Stogios, P.J, Quaile, A.T, Skarina, T, Stein, A, Di Leo, R, Yim, V, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-11-18
Release date:2015-01-14
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (1.954 Å)
Cite:Molecular Characterization of LubX: Functional Divergence of the U-Box Fold by Legionella pneumophila.
Structure, 23, 2015
5IPT
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BU of 5ipt by Molmil
Cryo-EM structure of GluN1/GluN2B NMDA receptor in the DCKA/D-APV-bound conformation, state 5
Descriptor: Ionotropic glutamate receptor subunit NR2B, N-methyl-D-aspartate receptor subunit NR1-8a
Authors:Zhu, S, Stein, A.R, Yoshioka, C, Lee, C.H, Goehring, A, Mchaourab, S.H, Gouaux, E.
Deposit date:2016-03-09
Release date:2016-04-20
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (14.1 Å)
Cite:Mechanism of NMDA Receptor Inhibition and Activation.
Cell, 165, 2016
5IOU
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BU of 5iou by Molmil
Cryo-EM structure of GluN1/GluN2B NMDA receptor in the glutamate/glycine-bound conformation
Descriptor: GLUTAMIC ACID, GLYCINE, Ionotropic glutamate receptor subunit NR2B, ...
Authors:Zhu, S, Stein, A.R, Yoshioka, C, Lee, C.H, Goehring, A, Mchaourab, S.H, Gouaux, E.
Deposit date:2016-03-09
Release date:2016-04-20
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Mechanism of NMDA Receptor Inhibition and Activation.
Cell, 165, 2016
5IPU
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BU of 5ipu by Molmil
Cryo-EM structure of GluN1/GluN2B NMDA receptor in the DCKA/D-APV-bound conformation, state 6
Descriptor: Ionotropic glutamate receptor subunit NR2B, N-methyl-D-aspartate receptor subunit NR1-8a
Authors:Zhu, S, Stein, A.R, Yoshioka, C, Lee, C.H, Goehring, A, Mchaourab, S.H, Gouaux, E.
Deposit date:2016-03-09
Release date:2016-04-20
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (15.4 Å)
Cite:Mechanism of NMDA Receptor Inhibition and Activation.
Cell, 165, 2016
5IPS
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BU of 5ips by Molmil
Cryo-EM structure of GluN1/GluN2B NMDA receptor in the DCKA/D-APV-bound conformation, state 4
Descriptor: Ionotropic glutamate receptor subunit NR2B, N-methyl-D-aspartate receptor subunit NR1-8a
Authors:Zhu, S, Stein, A.R, Yoshioka, C, Lee, C.H, Goehring, A, Mchaourab, S.H, Gouaux, E.
Deposit date:2016-03-09
Release date:2016-04-20
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (13.5 Å)
Cite:Mechanism of NMDA Receptor Inhibition and Activation.
Cell, 165, 2016
5IOV
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BU of 5iov by Molmil
Cryo-EM structure of GluN1/GluN2B NMDA receptor in the glutamate/glycine/Ro25-6981-bound conformation
Descriptor: 4-[(1R,2S)-3-(4-benzylpiperidin-1-yl)-1-hydroxy-2-methylpropyl]phenol, GLUTAMIC ACID, GLYCINE, ...
Authors:Zhu, S, Stein, A.R, Yoshioka, C, Lee, C.H, Goehring, A, Mchaourab, S.H, Gouaux, E.
Deposit date:2016-03-09
Release date:2016-04-20
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (7.5 Å)
Cite:Mechanism of NMDA Receptor Inhibition and Activation.
Cell, 165, 2016
5IPV
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BU of 5ipv by Molmil
Cryo-EM structure of GluN1/GluN2B NMDA receptor in the DCKA/D-APV-bound conformation, state 1
Descriptor: Ionotropic glutamate receptor subunit NR2B, N-methyl-D-aspartate receptor subunit NR1-8a
Authors:Zhu, S, Stein, A.R, Yoshioka, C, Lee, C.H, Goehring, A, McHaourab, S.H, Gouaux, E.
Deposit date:2016-03-10
Release date:2016-04-20
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (9.25 Å)
Cite:Mechanism of NMDA Receptor Inhibition and Activation.
Cell, 165, 2016
3GYG
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BU of 3gyg by Molmil
Crystal structure of yhjK (haloacid dehalogenase-like hydrolase protein) from Bacillus subtilis
Descriptor: MAGNESIUM ION, NTD biosynthesis operon putative hydrolase ntdB
Authors:Nocek, B, Stein, A, Wu, R, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-04-03
Release date:2009-05-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of yhjK (haloacid dehalogenase-like hydrolase protein) from Bacillus subtilis
To be Published
5V7V
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BU of 5v7v by Molmil
Cryo-EM structure of ERAD-associated E3 ubiquitin-protein ligase component HRD3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ERAD-associated E3 ubiquitin-protein ligase component HRD3, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Mi, W, Schoebel, S, Stein, A, Rapoport, T.A, Liao, M.
Deposit date:2017-03-20
Release date:2017-08-16
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structure of the protein-conducting ERAD channel Hrd1 in complex with Hrd3.
Nature, 548, 2017
5V6P
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BU of 5v6p by Molmil
CryoEM structure of the ERAD-associated E3 ubiquitin-protein ligase HRD1
Descriptor: ERAD-associated E3 ubiquitin-protein ligase HRD1
Authors:Schoebel, S, Mi, W, Stein, A, Rapoport, T.A, Liao, M.
Deposit date:2017-03-17
Release date:2017-08-16
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM structure of the protein-conducting ERAD channel Hrd1 in complex with Hrd3.
Nature, 548, 2017
3RRL
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BU of 3rrl by Molmil
Complex structure of 3-oxoadipate coA-transferase subunit A and B from Helicobacter pylori 26695
Descriptor: GLYCEROL, Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A, Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B
Authors:Nocek, B, Stein, A, Marshall, N, Jedrzejczak, R, Babnigg, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-04-29
Release date:2011-06-29
Last modified:2012-01-11
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Complex structure of 3-oxoadipate coA-transferase subunit A and B from Helicobacter pylori 26695
TO BE PUBLISHED
3PFM
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BU of 3pfm by Molmil
Crystal structure of a EAL domain of GGDEF domain protein from Pseudomonas fluorescens Pf
Descriptor: GGDEF domain protein
Authors:Nocek, B, Stein, A, Marshall, N, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-10-28
Release date:2010-11-10
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.908 Å)
Cite:Crystal structure of a EAL domain of GGDEF domain protein from Pseudomonas fluorescens Pf
TO BE PUBLISHED
3RPF
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BU of 3rpf by Molmil
Protein-protein complex of subunit 1 and 2 of Molybdopterin-converting factor from Helicobacter pylori 26695
Descriptor: 1,2-ETHANEDIOL, Molybdopterin converting factor, subunit 1 (MoaD), ...
Authors:Nocek, B, Stein, A, Marshall, N, Jedrzejczak, R, Babnigg, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-04-26
Release date:2011-06-29
Last modified:2012-01-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Protein-protein complex of subunit 1 and 2 of Molybdopterin-converting factor from Helicobacter pylori 26695
TO BE PUBLISHED
3PAM
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BU of 3pam by Molmil
Crystal structure of a domain of transmembrane protein of ABC-type oligopeptide transport system from Bartonella henselae str. Houston-1
Descriptor: ETHANOL, Transmembrane protein
Authors:Nocek, B, Stein, A, Mack, J, Buck, K, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-10-19
Release date:2010-11-17
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystal structure of a domain of transmembrane protein of ABC-type oligopeptide transport system from Bartonella henselae str. Houston-1"
TO BE PUBLISHED
3PES
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BU of 3pes by Molmil
Crystal structure of uncharacterized protein from Pseudomonas phage YuA
Descriptor: Uncharacterized protein gp49
Authors:Nocek, B, Stein, A, Evdokimove, A, Egorova, O, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-10-27
Release date:2010-12-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of uncharacterized protein from Pseudomonas phage YuA
TO BE PUBLISHED
3PZJ
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BU of 3pzj by Molmil
Crystal structure of a probable acetyltransferases (GNAT family) from Chromobacterium violaceum ATCC 12472
Descriptor: 1,2-ETHANEDIOL, Probable acetyltransferases, SODIUM ION
Authors:Nocek, B, Stein, A, Bigelow, L, Feldmann, B, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-12-14
Release date:2011-01-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of a probable acetyltransferases (GNAT family) from Chromobacterium violaceum ATCC 12472
TO BE PUBLISHED
3OT6
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BU of 3ot6 by Molmil
Crystal Structure of an enoyl-CoA hydratase/isomerase family protein from Psudomonas syringae
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, Enoyl-CoA hydratase/isomerase family protein
Authors:Joachimiak, A, Duke, N.E.C, Stein, A, Chhor, G, Freeman, L, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-09-10
Release date:2010-10-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of an enoyl-CoA hydratase/isomerase family protein from Psudomonas syringae
To be Published
3QOC
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BU of 3qoc by Molmil
Crystal structure of N-terminal domain (Creatinase/Prolidase like domain) of putative metallopeptidase from Corynebacterium diphtheriae
Descriptor: CHLORIDE ION, Putative metallopeptidase, SULFATE ION
Authors:Nocek, B, Stein, A, Marshall, N, Putagunta, R, Feldmann, B, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-02-09
Release date:2011-03-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of N-terminal domain (Creatinase/Prolidase like domain) of putative metallopeptidase from Corynebacterium diphtheriae
TO BE PUBLISHED
3P9Z
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BU of 3p9z by Molmil
Crystal structure of uroporphyrinogen-III synthetase from Helicobacter pylori 26695
Descriptor: MALONATE ION, Uroporphyrinogen III cosynthase (HemD)
Authors:Nocek, B, Stein, A, Chhor, G, Fenske, R.J, Buck, K, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-10-18
Release date:2010-11-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of uroporphyrinogen-III synthetase from Helicobacter pylori 26695
To be Published
3LM9
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BU of 3lm9 by Molmil
Crystal structure of fructokinase with ADP and Fructose bound in the active site
Descriptor: ADENOSINE-5'-DIPHOSPHATE, SULFATE ION, ZINC ION, ...
Authors:Nocek, B, Stein, A, Cuff, M, Volkart, L, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-01-29
Release date:2010-03-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural studies of ROK fructokinase YdhR from Bacillus subtilis: insights into substrate binding and fructose specificity.
J.Mol.Biol., 406, 2011

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