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PDB: 30 件
3UT6
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Crystal structure of E. Coli PNP complexed with PO4 and formycin A
分子名称: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, PHOSPHATE ION, Purine nucleoside phosphorylase deoD-type
著者Stefanic, Z.
登録日2011-11-25
公開日2012-05-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.895 Å)
主引用文献New phosphate binding sites in the crystal structure of Escherichia coli purine nucleoside phosphorylase complexed with phosphate and formycin A.
Febs Lett., 586, 2012
6F52
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Crystal structure of H. pylori purine nucleoside phosphorylase in complex with PO4 and formycin A
分子名称: Purine nucleoside phosphorylase DeoD-type
著者Stefanic, Z.
登録日2017-11-30
公開日2018-02-14
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Helicobacter pylori purine nucleoside phosphorylase shows new distribution patterns of open and closed active site conformations and unusual biochemical features.
FEBS J., 285, 2018
6F4W
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Crystal structure of H. pylori purine nucleoside phosphorylase in complex with formycin A
分子名称: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, Purine nucleoside phosphorylase DeoD-type
著者Stefanic, Z.
登録日2017-11-30
公開日2018-02-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.293 Å)
主引用文献Helicobacter pylori purine nucleoside phosphorylase shows new distribution patterns of open and closed active site conformations and unusual biochemical features.
FEBS J., 285, 2018
6F5I
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Crystal structure of H. pylori purine nucleoside phosphorylase
分子名称: METHANOL, Purine nucleoside phosphorylase DeoD-type
著者Stefanic, Z.
登録日2017-12-01
公開日2018-02-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.298 Å)
主引用文献Helicobacter pylori purine nucleoside phosphorylase shows new distribution patterns of open and closed active site conformations and unusual biochemical features.
FEBS J., 285, 2018
5LU0
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BU of 5lu0 by Molmil
Crystal structure of H. pylori referent strain in complex with PO4
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, PHOSPHATE ION, ...
著者Stefanic, Z.
登録日2016-09-07
公開日2017-09-20
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Helicobacter pylori purine nucleoside phosphorylase shows new distribution patterns of open and closed active site conformations and unusual biochemical features.
FEBS J., 285, 2018
9F17
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BU of 9f17 by Molmil
Crystal structure of N term His-tag Adenylosuccinate synthetase from Helicobacter pylori
分子名称: Adenylosuccinate synthetase, CALCIUM ION, GLYCEROL, ...
著者Stefanic, Z.
登録日2024-04-18
公開日2024-09-04
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Location Is Everything: Influence of His-Tag Fusion Site on Properties of Adenylosuccinate Synthetase from Helicobacter pylori.
Int J Mol Sci, 25, 2024
6F5A
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BU of 6f5a by Molmil
Crystal structure of H. pylori purine nucleoside phosphorylase
分子名称: Purine nucleoside phosphorylase DeoD-type
著者Stefanic, Z.
登録日2017-12-01
公開日2018-02-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.201 Å)
主引用文献Helicobacter pylori purine nucleoside phosphorylase shows new distribution patterns of open and closed active site conformations and unusual biochemical features.
FEBS J., 285, 2018
6F4X
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Crystal structure of H. pylori purine nucleoside phosphorylase in complex with PO4 and formycin A
分子名称: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, 1,2-ETHANEDIOL, PHOSPHATE ION, ...
著者Stefanic, Z.
登録日2017-11-30
公開日2018-02-14
最終更新日2018-04-25
実験手法X-RAY DIFFRACTION (1.694 Å)
主引用文献Helicobacter pylori purine nucleoside phosphorylase shows new distribution patterns of open and closed active site conformations and unusual biochemical features.
FEBS J., 285, 2018
6G7X
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Crystal structure of H. pylori purine nucleoside phosphorylase soaked in PO4
分子名称: IMIDAZOLE, PHOSPHATE ION, Purine nucleoside phosphorylase DeoD-type
著者Stefanic, Z.
登録日2018-04-06
公開日2018-08-08
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.762 Å)
主引用文献The Role of Phosphate Binding in Purine Nucleoside Phosphorylase of Helicobacter pylori
Croatica Chemica Acta, 91, 2018
5MAL
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BU of 5mal by Molmil
Crystal structure of extracelular lipase from Streptomyces rimosus at 1.7A resolution
分子名称: Lipase
著者Stefanic, Z.
登録日2016-11-03
公開日2017-06-14
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.708 Å)
主引用文献Catalytic Dyad in the SGNH Hydrolase Superfamily: In-depth Insight into Structural Parameters Tuning the Catalytic Process of Extracellular Lipase from Streptomyces rimosus.
ACS Chem. Biol., 12, 2017
5MX4
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BU of 5mx4 by Molmil
Crystal structure of H. pylori purine nucleoside phosphorylase from clinical isolate HpPNP-1
分子名称: HYPOXANTHINE, PHOSPHATE ION, Purine nucleoside phosphorylase DeoD-type
著者Stefanic, Z.
登録日2017-01-20
公開日2017-04-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Structural characterization of purine nucleoside phosphorylase from human pathogen Helicobacter pylori.
Int. J. Biol. Macromol., 101, 2017
4TS3
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BU of 4ts3 by Molmil
Wild type E. Coli purine nucleoside phosphorylase with 2 FMC molecules in active sites
分子名称: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, PHOSPHATE ION, Purine nucleoside phosphorylase DeoD-type
著者Stefanic, Z, Bzowska, A.
登録日2014-06-18
公開日2015-07-08
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystallographic snapshots of ligand binding to hexameric purine nucleoside phosphorylase and kinetic studies give insight into the mechanism of catalysis.
Sci Rep, 8, 2018
5MX6
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BU of 5mx6 by Molmil
Crystal structure of H. pylori purine nucleoside phosphorylase from clinical isolate HpPNP-2
分子名称: ACETATE ION, DI(HYDROXYETHYL)ETHER, HYPOXANTHINE, ...
著者Stefanic, Z.
登録日2017-01-21
公開日2017-04-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Structural characterization of purine nucleoside phosphorylase from human pathogen Helicobacter pylori.
Int. J. Biol. Macromol., 101, 2017
4TS9
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BU of 4ts9 by Molmil
Crystal structure of wild type E. Coli purine nucleoside phosphorylase with 6 FMC molecules
分子名称: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, PHOSPHATE ION, Purine nucleoside phosphorylase DeoD-type
著者Stefanic, Z, Bzowska, A.
登録日2014-06-18
公開日2015-07-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Crystallographic snapshots of ligand binding to hexameric purine nucleoside phosphorylase and kinetic studies give insight into the mechanism of catalysis.
Sci Rep, 8, 2018
4TTJ
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Crystal structure of double mutant E. Coli purine nucleoside phosphorylase with 6 FMC molecules
分子名称: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, PHOSPHATE ION, Purine nucleoside phosphorylase DeoD-type, ...
著者Stefanic, Z, Bzowska, A.
登録日2014-06-21
公開日2015-07-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.874 Å)
主引用文献Crystallographic snapshots of ligand binding to hexameric purine nucleoside phosphorylase and kinetic studies give insight into the mechanism of catalysis.
Sci Rep, 8, 2018
4TTA
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BU of 4tta by Molmil
Crystal structure of double mutant E. Coli purine nucleoside phosphorylase with 2 FMC molecules
分子名称: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, PHOSPHATE ION, Purine nucleoside phosphorylase DeoD-type, ...
著者Stefanic, Z, Bzowska, A.
登録日2014-06-20
公開日2015-07-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic snapshots of ligand binding to hexameric purine nucleoside phosphorylase and kinetic studies give insight into the mechanism of catalysis.
Sci Rep, 8, 2018
4TTI
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BU of 4tti by Molmil
Crystal structure of double mutant E. Coli purine nucleoside phosphorylase with 4 FMC molecules
分子名称: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, PHOSPHATE ION, Purine nucleoside phosphorylase DeoD-type, ...
著者Stefanic, Z, Bzowska, A.
登録日2014-06-21
公開日2015-07-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Crystallographic snapshots of ligand binding to hexameric purine nucleoside phosphorylase and kinetic studies give insight into the mechanism of catalysis.
Sci Rep, 8, 2018
5MX8
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BU of 5mx8 by Molmil
Crystal structure of H. pylori purine nucleoside phosphorylase from clinical isolate HpPNP-3
分子名称: HYPOXANTHINE, PHOSPHATE ION, Purine nucleoside phosphorylase DeoD-type, ...
著者Stefanic, Z.
登録日2017-01-21
公開日2017-04-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural characterization of purine nucleoside phosphorylase from human pathogen Helicobacter pylori.
Int. J. Biol. Macromol., 101, 2017
6ZXQ
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BU of 6zxq by Molmil
Adenylosuccinate Synthetase from H. pylori in complex with HDA, GDP, IMO, Mg
分子名称: 6-O-PHOSPHORYL INOSINE MONOPHOSPHATE, Adenylosuccinate synthetase, GUANOSINE-5'-DIPHOSPHATE, ...
著者Bubic, A, Stefanic, Z.
登録日2020-07-30
公開日2021-08-11
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The pursuit of new alternative ways to eradicate Helicobacter pylori continues: Detailed characterization of interactions in the adenylosuccinate synthetase active site
Int.J.Biol.Macromol., 2023
3EIV
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BU of 3eiv by Molmil
Crystal Structure of Single-stranded DNA-binding protein from Streptomyces coelicolor
分子名称: Single-stranded DNA-binding protein 2
著者Luic, M, Stefanic, Z, Vujaklija, D.
登録日2008-09-17
公開日2009-09-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.141 Å)
主引用文献Structure of the single-stranded DNA-binding protein from Streptomyces coelicolor.
Acta Crystallogr.,Sect.D, 65, 2009
2NW6
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BU of 2nw6 by Molmil
Burkholderia cepacia lipase complexed with S-inhibitor
分子名称: (1S)-1-(PHENOXYMETHYL)PROPYL METHYLPHOSPHONOCHLORIDOATE, CALCIUM ION, Lipase, ...
著者Luic, M, Stefanic, Z.
登録日2006-11-14
公開日2007-12-04
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Combined X-ray diffraction and QM/MM study of the Burkholderia cepacia lipase-catalyzed secondary alcohol esterification
J.Phys.Chem.B, 112, 2008
7OOY
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BU of 7ooy by Molmil
Purine nucleoside phosphorylase(DeoD-type) from H. pylori with 6-benzylthio-2-chloropurine
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 6-benzylthio-2-chloropurine, GLYCEROL, ...
著者Narczyk, M, Stefanic, Z.
登録日2021-05-28
公開日2022-05-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Interactions of 2,6-substituted purines with purine nucleoside phosphorylase from Helicobacter pylori in solution and in the crystal, and the effects of these compounds on cell cultures of this bacterium.
J Enzyme Inhib Med Chem, 37, 2022
7OP9
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BU of 7op9 by Molmil
Purine nucleoside phosphorylase(DeoD-type) from H. pylori with 2,6-dichloropurine
分子名称: 2,6-bis(chloranyl)-7H-purine, IMIDAZOLE, MAGNESIUM ION, ...
著者Narczyk, M, Stefanic, Z.
登録日2021-05-31
公開日2022-05-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Interactions of 2,6-substituted purines with purine nucleoside phosphorylase from Helicobacter pylori in solution and in the crystal, and the effects of these compounds on cell cultures of this bacterium.
J Enzyme Inhib Med Chem, 37, 2022
7OPA
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BU of 7opa by Molmil
Purine nucleoside phosphorylase(DeoD-type) from H. pylori with 6-benzylthiopurine
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 6-benzylthio-2-chloropurine, GLYCEROL, ...
著者Narczyk, M, Stefanic, Z.
登録日2021-05-31
公開日2022-05-04
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Interactions of 2,6-substituted purines with purine nucleoside phosphorylase from Helicobacter pylori in solution and in the crystal, and the effects of these compounds on cell cultures of this bacterium.
J Enzyme Inhib Med Chem, 37, 2022
3ONV
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BU of 3onv by Molmil
Crystal structure of E. Coli purine nucleoside phosphorylase with SO4
分子名称: Purine nucleoside phosphorylase deoD-type, SULFATE ION
著者Mikleusevic, G, Stefanic, Z, Narzyk, M, Wielgus-Kutrowska, B, Bzowska, A, Luic, M.
登録日2010-08-30
公開日2011-07-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.893 Å)
主引用文献Validation of the catalytic mechanism of Escherichia coli purine nucleoside phosphorylase by structural and kinetic studies.
Biochimie, 93, 2011

 

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