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PDB: 28 results

5CG0
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Crystal structure of Spodoptera frugiperda Beta-glycosidase
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Tamaki, F.K, Souza, D.P, Souza, V.P, Farah, S.C, Marana, S.R.
Deposit date:2015-07-08
Release date:2015-12-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Using the Amino Acid Network to Modulate the Hydrolytic Activity of beta-Glycosidases.
PLoS ONE, 11, 2016
6MCF
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BU of 6mcf by Molmil
Solution structure of 7SK stem-loop 1 with HIV-1 Tat RNA Binding Domain
Descriptor: 7SK Stem-loop 1 RNA, Protein Tat
Authors:Pham, V.V, D'Souza, V.M.
Deposit date:2018-08-31
Release date:2018-10-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:HIV-1 Tat interactions with cellular 7SK and viral TAR RNAs identifies dual structural mimicry.
Nat Commun, 9, 2018
6MCE
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BU of 6mce by Molmil
Solution structure of HIV-1 TAR with Tat RNA Binding Domain
Descriptor: Protein Tat, TAR RNA
Authors:Pham, V.V, D'Souza, V.M.
Deposit date:2018-08-31
Release date:2018-10-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:HIV-1 Tat interactions with cellular 7SK and viral TAR RNAs identifies dual structural mimicry.
Nat Commun, 9, 2018
6XRZ
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BU of 6xrz by Molmil
The 28-kDa Frameshift Stimulation Element from the SARS-CoV-2 RNA Genome
Descriptor: Frameshift Stimulation Element from the SARS-CoV-2 RNA Genome
Authors:Zhang, K, Zheludev, I, Hagey, R, Wu, M, Haslecker, R, Hou, Y, Kretsch, R, Pintilie, G, Rangan, R, Kladwang, W, Li, S, Pham, E, Souibgui, C, Baric, R, Sheahan, T, Souza, V, Glenn, J, Chiu, W, Das, R.
Deposit date:2020-07-14
Release date:2020-08-19
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (6.9 Å)
Cite:Cryo-electron Microscopy and Exploratory Antisense Targeting of the 28-kDa Frameshift Stimulation Element from the SARS-CoV-2 RNA Genome.
Biorxiv, 2020
5A7G
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BU of 5a7g by Molmil
Comparison of the structure and activity of glycosylated and aglycosylated Human Carboxylesterase 1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, LIVER CARBOXYLESTERASE 1
Authors:Arena de Souza, V, Scott, D.J, Charlton, M, Walsh, M.A, Owen, R.J.
Deposit date:2015-07-04
Release date:2016-01-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Comparison of the Structure and Activity of Glycosylated and Aglycosylated Human Carboxylesterase 1.
Plos One, 10, 2015
5A7F
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Comparison of the structure and activity of glycosylated and aglycosylated Human Carboxylesterase 1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, LIVER CARBOXYLESTERASE 1, PHOSPHATE ION
Authors:Arena de Souza, V, Scott, D.J, Charlton, M, Walsh, M.A, Owen, R.J.
Deposit date:2015-07-03
Release date:2016-01-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Comparison of the Structure and Activity of Glycosylated and Aglycosylated Human Carboxylesterase 1.
Plos One, 10, 2015
5A7H
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BU of 5a7h by Molmil
Comparison of the structure and activity of glycosylated and aglycosylated Human Carboxylesterase 1
Descriptor: IODIDE ION, LIVER CARBOXYLESTERASE 1
Authors:Arena de Souza, V, Scott, D.J, Charlton, M, Walsh, M.A, Owen, R.J.
Deposit date:2015-07-04
Release date:2016-01-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Comparison of the Structure and Activity of Glycosylated and Aglycosylated Human Carboxylesterase 1.
Plos One, 10, 2015
1WKM
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BU of 1wkm by Molmil
THE PRODUCT BOUND FORM OF THE MN(II)LOADED METHIONINE AMINOPEPTIDASE FROM HYPERTHERMOPHILE PYROCOCCUS FURIOSUS
Descriptor: MANGANESE (II) ION, METHIONINE, Methionine aminopeptidase
Authors:Copik, A.J, Nocek, B.P, Jang, S.B, Swierczek, S.I, Ruebush, S, Meng, L, D'souza, V.M, Peters, J.W, Bennett, B, Holz, R.C.
Deposit date:2004-06-01
Release date:2005-02-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:EPR and X-ray crystallographic characterization of the product-bound form of the MnII-loaded methionyl aminopeptidase from Pyrococcus furiosus
Biochemistry, 44, 2005
6MCI
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BU of 6mci by Molmil
Solution structure of 7SK stem-loop 1
Descriptor: 7SK RNA
Authors:Pham, V.V, D'Souza, V.M.
Deposit date:2018-08-31
Release date:2018-10-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:HIV-1 Tat interactions with cellular 7SK and viral TAR RNAs identifies dual structural mimicry.
Nat Commun, 9, 2018
7T1N
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BU of 7t1n by Molmil
Solution structure of 7SK stem-loop 1 with HEXIM Arginine Rich Motif
Descriptor: HEXIM Arginine Rich Motif, RNA (56-MER)
Authors:Pham, V.V, Gao, M, D'Souza, V.M.
Deposit date:2021-12-02
Release date:2022-09-14
Last modified:2024-05-15
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:A structure-based mechanism for displacement of the HEXIM adapter from 7SK small nuclear RNA.
Commun Biol, 5, 2022
7T1O
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BU of 7t1o by Molmil
Solution structure of 7SK stem-loop 1 with HIV-1 Tat Subtype G Arginine Rich Motif
Descriptor: 7SK stem-loop 1 RNA (56-MER), Tat Subtype G Arginine Rich Motif
Authors:Pham, V.V, Gao, M, D'Souza, V.M.
Deposit date:2021-12-02
Release date:2022-09-14
Last modified:2024-05-15
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:A structure-based mechanism for displacement of the HEXIM adapter from 7SK small nuclear RNA.
Commun Biol, 5, 2022
7T1P
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BU of 7t1p by Molmil
Solution structure of 7SK stem-loop 1 with HIV-1 Tat Finland Arginine Rich Motif
Descriptor: RNA (56-MER), Tat Finland Arginine Rich Motif
Authors:Pham, V.V, Gao, M, D'Souza, V.M.
Deposit date:2021-12-02
Release date:2022-09-14
Last modified:2024-05-15
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:A structure-based mechanism for displacement of the HEXIM adapter from 7SK small nuclear RNA.
Commun Biol, 5, 2022
1S9S
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BU of 1s9s by Molmil
SOLUTION STRUCTURE OF MLV PSI SITE
Descriptor: MLV Psi encapsidation site
Authors:D'Souza, V, Dey, A, Habib, D, Summers, M.F.
Deposit date:2004-02-05
Release date:2004-04-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of the 101-nucleotide core encapsidation signal of the Moloney Murine Leukemia Virus.
J.Mol.Biol., 337, 2004
1U6P
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BU of 1u6p by Molmil
NMR Structure of the MLV encapsidation signal bound to the Nucleocapsid protein
Descriptor: 101-MER, Gag polyprotein, ZINC ION
Authors:D'Souza, V, Summers, M.F.
Deposit date:2004-07-30
Release date:2004-11-02
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis for packaging the dimeric genome of Moloney murine leukaemia virus
Nature, 431, 2004
7KUC
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BU of 7kuc by Molmil
Ax1 Domain of VEGF Readthrough Element
Descriptor: VEGF Ax1
Authors:D'Souza, V.M, Wagner, N.O, Edwards, J.M.
Deposit date:2020-11-24
Release date:2022-06-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Stop codon readthrough in VEGF-A is regulated by complex signals
To Be Published
7KUB
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BU of 7kub by Molmil
Au1 Domain of VEGF Readthrough Element
Descriptor: RNA (60-MER)
Authors:D'Souza, V.M, Wagner, N.O, Edwards, J.M.
Deposit date:2020-11-24
Release date:2022-06-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Stop codon readthrough in VEGF-A is regulated by complex signals
To Be Published
7KUD
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BU of 7kud by Molmil
Ax2 Domain of VEGF Readthrough Element
Descriptor: VEGF Ax2
Authors:D'Souza, V.M, Wagner, N.O, Edwards, J.M.
Deposit date:2020-11-24
Release date:2022-06-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Stop codon readthrough in VEGF-A is regulated by complex signals
To Be Published
2MS0
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BU of 2ms0 by Molmil
Solution NMR structure pf tRNApro:MLV-Nucleocapsid (1:2) Complex
Descriptor: Nucleocapsid protein p10, ZINC ION, tRNApro
Authors:D'Souza, V, Yildiz, Z.
Deposit date:2014-07-19
Release date:2014-09-17
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A structure-based mechanism for tRNA and retroviral RNA remodelling during primer annealing.
Nature, 515, 2014
2NBX
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BU of 2nbx by Molmil
Solution structure of the J-K region of EMCV IRES
Descriptor: IRES RNA (108-MER)
Authors:Imai, S, D'Souza, V, Wagner, G.
Deposit date:2016-03-16
Release date:2016-08-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation.
Nat. Struct. Mol. Biol., 23, 2016
2NBZ
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BU of 2nbz by Molmil
Solution structure of the K domain of EMCV IRES
Descriptor: IRES RNA 40-MER
Authors:Imai, S, D'Souza, V, Wagner, G.
Deposit date:2016-03-16
Release date:2016-08-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation.
Nat. Struct. Mol. Biol., 23, 2016
2NC0
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BU of 2nc0 by Molmil
Solution structure of the St domain of EMCV IRES
Descriptor: IRES RNA (28-MER)
Authors:Imai, S, D'Souza, V, Wagner, G.
Deposit date:2016-03-16
Release date:2016-08-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation.
Nat. Struct. Mol. Biol., 23, 2016
2NC1
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BU of 2nc1 by Molmil
Solution structure of the delta-J-delta-K domain of EMCV IRES
Descriptor: IRES RNA (67-MER)
Authors:Imai, S, D'Souza, V, Wagner, G.
Deposit date:2016-03-16
Release date:2016-08-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation.
Nat. Struct. Mol. Biol., 23, 2016
2MQT
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BU of 2mqt by Molmil
Solution NMR structure of the U5-primer binding site (U5-PBS) domain of murine leukemia virus RNA genome
Descriptor: RNA (68-MER)
Authors:D'Souza, V, Yildiz, Z.
Deposit date:2014-06-26
Release date:2014-09-10
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A structure-based mechanism for tRNA and retroviral RNA remodelling during primer annealing.
Nature, 515, 2014
2MS1
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BU of 2ms1 by Molmil
Solution NMR structure of tRNApro:MLV Nucleocapsid Protein (1:1) Complex
Descriptor: Nucleocapsid protein p10, ZINC ION, tRNApro
Authors:D'Souza, V, Yildiz, Z.
Deposit date:2014-07-19
Release date:2014-09-10
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A structure-based mechanism for tRNA and retroviral RNA remodelling during primer annealing.
Nature, 515, 2014
2NBY
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BU of 2nby by Molmil
Solution structure of the J domain of EMCV IRES
Descriptor: IRES RNA (39-MER)
Authors:Imai, S, D'Souza, V, Wagner, G.
Deposit date:2016-03-16
Release date:2016-08-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation.
Nat. Struct. Mol. Biol., 23, 2016

 

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數據於2024-10-30公開中

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