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PDB: 297 results

5KLP
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BU of 5klp by Molmil
Crystal structure of HopZ1a in complex with IP6
Descriptor: CITRIC ACID, INOSITOL HEXAKISPHOSPHATE, Orf34
Authors:Zhang, Z.-M, Song, J.
Deposit date:2016-06-24
Release date:2016-08-10
Last modified:2020-10-14
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Structure of a pathogen effector reveals the enzymatic mechanism of a novel acetyltransferase family.
Nat.Struct.Mol.Biol., 23, 2016
4YUO
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BU of 4yuo by Molmil
High-resolution multiconformer synchrotron model of CypA at 273 K
Descriptor: Peptidyl-prolyl cis-trans isomerase A
Authors:Keedy, D.A, Kenner, L.R, Warkentin, M, Woldeyes, R.A, Thompson, M.C, Brewster, A.S, Van Benschoten, A.H, Baxter, E.L, Hopkins, J.B, Uervirojnangkoorn, M, McPhillips, S.E, Song, J, Mori, R.A, Holton, J.M, Weis, W.I, Brunger, A.T, Soltis, M, Lemke, H, Gonzalez, A, Sauter, N.K, Cohen, A.E, van den Bedem, H, Thorne, R.E, Fraser, J.S.
Deposit date:2015-03-18
Release date:2015-05-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography.
Elife, 4, 2015
4YUJ
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BU of 4yuj by Molmil
Multiconformer synchrotron model of CypA at 240 K
Descriptor: Peptidyl-prolyl cis-trans isomerase A
Authors:Keedy, D.A, Kenner, L.R, Warkentin, M, Woldeyes, R.A, Thompson, M.C, Brewster, A.S, Van Benschoten, A.H, Baxter, E.L, Hopkins, J.B, Uervirojnangkoorn, M, McPhillips, S.E, Song, J, Mori, R.A, Holton, J.M, Weis, W.I, Brunger, A.T, Soltis, M, Lemke, H, Gonzalez, A, Sauter, N.K, Cohen, A.E, van den Bedem, H, Thorne, R.E, Fraser, J.S.
Deposit date:2015-03-18
Release date:2015-10-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography.
Elife, 4, 2015
4YUN
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BU of 4yun by Molmil
Multiconformer synchrotron model of CypA at 310 K
Descriptor: Peptidyl-prolyl cis-trans isomerase A
Authors:Keedy, D.A, Kenner, L.R, Warkentin, M, Woldeyes, R.A, Thompson, M.C, Brewster, A.S, Van Benschoten, A.H, Baxter, E.L, Hopkins, J.B, Uervirojnangkoorn, M, McPhillips, S.E, Song, J, Mori, R.A, Holton, J.M, Weis, W.I, Brunger, A.T, Soltis, M, Lemke, H, Gonzalez, A, Sauter, N.K, Cohen, A.E, van den Bedem, H, Thorne, R.E, Fraser, J.S.
Deposit date:2015-03-18
Release date:2015-10-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography.
Elife, 4, 2015
4YUM
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BU of 4yum by Molmil
Multiconformer synchrotron model of CypA at 300 K
Descriptor: Peptidyl-prolyl cis-trans isomerase A
Authors:Keedy, D.A, Kenner, L.R, Warkentin, M, Woldeyes, R.A, Thompson, M.C, Brewster, A.S, Van Benschoten, A.H, Baxter, E.L, Hopkins, J.B, Uervirojnangkoorn, M, McPhillips, S.E, Song, J, Mori, R.A, Holton, J.M, Weis, W.I, Brunger, A.T, Soltis, M, Lemke, H, Gonzalez, A, Sauter, N.K, Cohen, A.E, van den Bedem, H, Thorne, R.E, Fraser, J.S.
Deposit date:2015-03-18
Release date:2015-10-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography.
Elife, 4, 2015
5XQ5
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BU of 5xq5 by Molmil
NMR structure of the domain 5 of the E. coli ribosomal protein S1
Descriptor: 30S ribosomal protein S1
Authors:Lu, Y, Lim, L.Z, Song, J.
Deposit date:2017-06-06
Release date:2018-06-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR structure of the domain 5 of the E. coli ribosomal protein S1
To Be Published
1Z3K
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BU of 1z3k by Molmil
Structural Insight into the Binding Diversity between the Tyr-Phosphorylated Human EphrinBs and Nck2 SH2 Domain
Descriptor: Cytoplasmic protein NCK2
Authors:Ran, X, Song, J.
Deposit date:2005-03-14
Release date:2005-03-29
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural insight into the binding diversity between the Tyr-phosphorylated human ephrinBs and Nck2 SH2 domain.
J.Biol.Chem., 280, 2005
3OWO
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BU of 3owo by Molmil
Structures of iron-dependent alcohol dehydrogenase 2 from Zymomonas mobilis ZM4 with and without NAD cofactor
Descriptor: Alcohol dehydrogenase 2, FE (II) ION
Authors:Moon, J.H, Lee, H.J, Song, J.M, Park, S.Y, Park, M.Y, Park, H.M, Sun, J, Park, J.H, Kim, J.S.
Deposit date:2010-09-20
Release date:2011-02-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structures of iron-dependent alcohol dehydrogenase 2 from Zymomonas mobilis ZM4 with and without NAD+ cofactor
J.Mol.Biol., 407, 2011
3SXO
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BU of 3sxo by Molmil
Mycobacterium tuberculosis Eis protein initiates modulation of host immune responses by acetylation of DUSP16/MKP-7
Descriptor: Enhanced intracellular survival protein
Authors:Kim, K.H, An, D.R, Yoon, J.Y, Kim, H.S, Yoon, H.J, Song, J.S, Im, H.N, Kim, J, Kim, D.J, Lee, S.J, Kim, H.J, Lee, J.Y, Suh, S.W.
Deposit date:2011-07-15
Release date:2012-07-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mycobacterium tuberculosis Eis protein initiates modulation of host immune responses by acetylation of DUSP16/MKP-7
To be Published
1YYC
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BU of 1yyc by Molmil
Solution Structure of a putative late embryogenesis abundant (LEA) protein At2g46140.1
Descriptor: putative late embryogenesis abundant protein
Authors:Center for Eukaryotic Structural Genomics (CESG), Song, J, Tyler, R.C, Lee, M.S, Markley, J.L.
Deposit date:2005-02-24
Release date:2005-04-05
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of a putative late embryogenesis abundant (LEA) protein At2g46140.1
To be Published
3OX4
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BU of 3ox4 by Molmil
Structures of iron-dependent alcohol dehydrogenase 2 from Zymomonas mobilis ZM4 complexed with NAD cofactor
Descriptor: Alcohol dehydrogenase 2, FE (II) ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Moon, J.H, Lee, H.J, Song, J.M, Park, S.Y, Park, M.Y, Park, H.M, Sun, J, Park, J.H, Kim, J.S.
Deposit date:2010-09-21
Release date:2011-02-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of iron-dependent alcohol dehydrogenase 2 from Zymomonas mobilis ZM4 with and without NAD+ cofactor
J.Mol.Biol., 407, 2011
2GJ2
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BU of 2gj2 by Molmil
Crystal Structure of VP9 from White Spot Syndrome Virus
Descriptor: CADMIUM ION, wsv230
Authors:Liu, Y, Wu, J.L, Song, J.X, Sivaraman, J, Hew, C.L.
Deposit date:2006-03-30
Release date:2006-09-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Identification of a Novel Nonstructural Protein, VP9, from White Spot Syndrome Virus: Its Structure Reveals a Ferredoxin Fold with Specific Metal Binding Sites
J.Virol., 80, 2006
3EAJ
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BU of 3eaj by Molmil
Crystal structure of SARS-CoV main protease quadruple mutant STIF/A with two molecules in one asymmetric unit
Descriptor: 3C-like proteinase
Authors:Shi, J.H, Jayaraman, S, Song, J.X.
Deposit date:2008-08-26
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:crystal structure of SARS-CoV Mpro mutant with two molecules one ASU
To be Published
3RYO
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BU of 3ryo by Molmil
Crystal Structure of Enhanced Intracellular Survival (Eis) Protein from Mycobacterium tuberculosis with Acetyl CoA
Descriptor: ACETYL COENZYME *A, Enhanced intracellular survival protein
Authors:Kim, K.H, An, D.R, Yoon, J.Y, Kim, H.S, Yoon, H.J, Song, J, Im, H.N, Kim, J, Kim, D.J, Lee, S.J, Kim, H.J, Lee, J.Y, Suh, S.W.
Deposit date:2011-05-11
Release date:2012-05-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Mycobacterium tuberculosis Eis protein initiates suppression of host immune responses by acetylation of DUSP16/MKP-7
Proc.Natl.Acad.Sci.USA, 2012
3EA9
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BU of 3ea9 by Molmil
Crystal structure of SARS-CoV main protease quadruple mutant STIF/A with one molecule in one asymmetric unit
Descriptor: 3C-like proteinase
Authors:Shi, J.H, Jayaraman, S, Song, J.X.
Deposit date:2008-08-25
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:crystal structure of SARS-CoV Mpro quadruple mutant
To be Published
3E91
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BU of 3e91 by Molmil
Crystal structure of SARS-CoV Mpro mutant in P21 at pH6.9
Descriptor: 3C-like proteinase
Authors:Shi, J.H, Jayaraman, S, Song, J.X.
Deposit date:2008-08-21
Release date:2009-08-25
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural analysis of the activity-enhanced SARS-CoV Mpro C-terminal mutant
To be Published
3EA7
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BU of 3ea7 by Molmil
Crystal structure of SARS-CoV main protease triple mutant STI/A in space group P21
Descriptor: 3C-like proteinase
Authors:Shi, J.H, Jayaraman, S, Song, J.X.
Deposit date:2008-08-25
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of SARS-CoV Mpro mutant
To be Published
3EA8
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BU of 3ea8 by Molmil
Crystal structure of SARS-CoV main protease triple mutant STI/A in space group C2
Descriptor: 3C-like proteinase
Authors:Shi, J.H, Jayaraman, S, Song, J.X.
Deposit date:2008-08-25
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of SARS-CoV Mpro mutant
To be Published
3TD5
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BU of 3td5 by Molmil
Crystal structure of OmpA-like domain from Acinetobacter baumannii in complex with L-Ala-gamma-D-Glu-m-DAP-D-Ala-D-Ala
Descriptor: CHLORIDE ION, Outer membrane protein omp38, peptide(L-Ala-gamma-D-Glu-m-DAP-D-Ala-D-Ala)
Authors:Park, J.S, Lee, W.C, Song, J.H, Kim, H.Y.
Deposit date:2011-08-10
Release date:2011-10-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanism of anchoring of OmpA protein to the cell wall peptidoglycan of the gram-negative bacterial outer membrane
Faseb J., 26, 2012
3TD4
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BU of 3td4 by Molmil
Crystal structure of OmpA-like domain from Acinetobacter baumannii in complex with diaminopimelate
Descriptor: 2,6-DIAMINOPIMELIC ACID, Outer membrane protein omp38
Authors:Park, J.S, Lee, W.C, Song, J.H, Kim, H.Y.
Deposit date:2011-08-10
Release date:2011-10-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Mechanism of anchoring of OmpA protein to the cell wall peptidoglycan of the gram-negative bacterial outer membrane
Faseb J., 26, 2012
3TD3
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BU of 3td3 by Molmil
Crystal structure of OmpA-like domain from Acinetobacter baumannii in complex with glycine
Descriptor: GLYCINE, Outer membrane protein omp38
Authors:Park, J.S, Lee, W.C, Song, J.H, Kim, H.Y.
Deposit date:2011-08-10
Release date:2011-10-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Mechanism of anchoring of OmpA protein to the cell wall peptidoglycan of the gram-negative bacterial outer membrane
Faseb J., 26, 2012
2GJI
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BU of 2gji by Molmil
NMR solution structure of VP9 from White Spot Syndrome Virus
Descriptor: wsv230
Authors:Liu, Y, Wu, J.L, Song, J.X, Sivaraman, J, Hew, C.L.
Deposit date:2006-03-30
Release date:2006-09-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Identification of a Novel Nonstructural Protein, VP9, from White Spot Syndrome Virus: Its Structure Reveals a Ferredoxin Fold with Specific Metal Binding Sites
J.Virol., 80, 2006
3UFB
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BU of 3ufb by Molmil
Crystal structure of a modification subunit of a putative type I restriction enzyme from Vibrio vulnificus YJ016
Descriptor: Type I restriction-modification system methyltransferase subunit
Authors:Park, S.Y, Lee, H.J, Sun, J, Nishi, K, Song, J.M, Kim, J.S.
Deposit date:2011-11-01
Release date:2012-11-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural characterization of a modification subunit of a putative type I restriction enzyme from Vibrio vulnificus YJ016
Acta Crystallogr.,Sect.D, 68, 2012
3M3T
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BU of 3m3t by Molmil
SARS-CoV main protease monomeric Arg298Ala mutant with N-terminal additional residues (Gly-Ser)
Descriptor: 3C-like proteinase
Authors:Shi, J.H, Song, J.X.
Deposit date:2010-03-10
Release date:2011-03-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:SARS-CoV main protease with N-terminal extension regulated by mutation on C-terminal domain
To be Published
3M3V
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BU of 3m3v by Molmil
SARS-CoV main protease triple mutant STI/A with two N-terminal additional residue (Gly-Ser)
Descriptor: 3C-like proteinase
Authors:Shi, J.H, Song, J.X.
Deposit date:2010-03-10
Release date:2011-03-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:SARS-CoV main protease with N-terminal extension regulated by mutations on the C-terminal domain
To be Published

221716

数据于2024-06-26公开中

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