Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 235 results

5XLC
DownloadVisualize
BU of 5xlc by Molmil
The structure of hemagglutinin Q226L-G228S mutant from an avian-origin H4N6 influenza virus in complex with avian receptor analog LSTa
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, N-acetyl-alpha-neuraminic acid
Authors:Song, H, Qi, J, Gao, G.F.
Deposit date:2017-05-10
Release date:2017-08-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Avian-to-Human Receptor-Binding Adaptation by Influenza A Virus Hemagglutinin H4
Cell Rep, 20, 2017
5XL3
DownloadVisualize
BU of 5xl3 by Molmil
Complex structure of H4 hemagglutinin from avian influenza H4N6 virus with LSTa
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, N-acetyl-alpha-neuraminic acid, ...
Authors:Song, H, Qi, J, Gao, G.F.
Deposit date:2017-05-10
Release date:2017-08-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.203 Å)
Cite:Avian-to-Human Receptor-Binding Adaptation by Influenza A Virus Hemagglutinin H4
Cell Rep, 20, 2017
5XL5
DownloadVisualize
BU of 5xl5 by Molmil
The structure of hemagglutinin Q226L mutant from an avian-origin H4N6 influenza virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
Authors:Song, H, Qi, J, Gao, G.F.
Deposit date:2017-05-10
Release date:2017-08-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Avian-to-Human Receptor-Binding Adaptation by Influenza A Virus Hemagglutinin H4
Cell Rep, 20, 2017
7ZB0
DownloadVisualize
BU of 7zb0 by Molmil
macrocyclase OphP with 15mer
Descriptor: 1,2-ETHANEDIOL, 15mer, BICARBONATE ION, ...
Authors:Song, H, Naismith, J.H.
Deposit date:2022-03-23
Release date:2022-07-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Molecular basis for the enzymatic macrocyclization of multiply backbone N-methylated peptides
Biorxiv, 2022
7ZB1
DownloadVisualize
BU of 7zb1 by Molmil
S580A with 18mer
Descriptor: 1,2-ETHANEDIOL, 18mer, BICARBONATE ION, ...
Authors:Song, H, Naismith, J.H.
Deposit date:2022-03-23
Release date:2022-07-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular basis for the enzymatic macrocyclization of multiply backbone N-methylated peptides
Biorxiv, 2022
7ZAZ
DownloadVisualize
BU of 7zaz by Molmil
macrocyclase OphP with ZPP
Descriptor: 1,2-ETHANEDIOL, BICARBONATE ION, DIMETHYL SULFOXIDE, ...
Authors:Song, H, Naismith, J.H.
Deposit date:2022-03-23
Release date:2022-07-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular basis for the enzymatic macrocyclization of multiply backbone N-methylated peptides
Biorxiv, 2022
7ZB2
DownloadVisualize
BU of 7zb2 by Molmil
apo macrocyclase OphP
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Song, H, Naismith, J.H.
Deposit date:2022-03-23
Release date:2022-07-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Molecular basis for the enzymatic macrocyclization of multiply backbone N-methylated peptides
Biorxiv, 2022
8XB8
DownloadVisualize
BU of 8xb8 by Molmil
The structure of ASFV A137R
Descriptor: A137R
Authors:Li, C, Song, H, Gao, G.F.
Deposit date:2023-12-06
Release date:2024-01-31
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:African swine fever virus A137R assembles into a dodecahedron cage.
J.Virol., 98, 2024
1C78
DownloadVisualize
BU of 1c78 by Molmil
STAPHYLOKINASE (SAK) DIMER
Descriptor: STAPHYLOKINASE
Authors:Rao, Z, Jiang, F, Liu, Y, Zhang, X, Chen, Y, Bartlam, M, Song, H, Ding, Y.
Deposit date:2000-02-01
Release date:2000-08-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a staphylokinase: variant a model for reduced antigenicity.
Eur.J.Biochem., 269, 2002
1C77
DownloadVisualize
BU of 1c77 by Molmil
STAPHYLOKINASE (SAK) DIMER
Descriptor: STAPHYLOKINASE
Authors:Rao, Z, Jiang, F, Liu, Y, Zhang, X, Chen, Y, Bartlam, M, Song, H, Ding, Y.
Deposit date:2000-02-01
Release date:2000-08-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a staphylokinase: variant a model for reduced antigenicity.
Eur.J.Biochem., 269, 2002
1C79
DownloadVisualize
BU of 1c79 by Molmil
STAPHYLOKINASE (SAK) DIMER
Descriptor: STAPHYLOKINASE
Authors:Rao, Z, Jiang, F, Liu, Y, Zhang, X, Chen, Y, Bartlam, M, Song, H, Ding, Y.
Deposit date:2000-02-01
Release date:2000-08-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a staphylokinase: variant a model for reduced antigenicity.
Eur.J.Biochem., 269, 2002
5N0P
DownloadVisualize
BU of 5n0p by Molmil
Crystal structure of OphA-DeltaC18 in complex with SAH
Descriptor: 1,2-ETHANEDIOL, S-ADENOSYL-L-HOMOCYSTEINE, peptide N-methyltranferase
Authors:Naismith, J.H, Song, H.
Deposit date:2017-02-03
Release date:2018-02-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:A molecular mechanism for the enzymatic methylation of nitrogen atoms within peptide bonds.
Sci Adv, 4, 2018
6SJ4
DownloadVisualize
BU of 6sj4 by Molmil
Amidohydrolase, AHS with substrate analog
Descriptor: 1,2-ETHANEDIOL, 3-(3-hydroxyphenyl)carbonyloxybenzoic acid, Amidohydrolase, ...
Authors:Naismith, J.H, Song, H.
Deposit date:2019-08-12
Release date:2020-01-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility.
Angew.Chem.Int.Ed.Engl., 59, 2020
6SJ2
DownloadVisualize
BU of 6sj2 by Molmil
Amidohydrolase, AHS with 3-HAA
Descriptor: 3-HYDROXYANTHRANILIC ACID, Amidohydrolase, GLYCEROL, ...
Authors:Naismith, J.H, Song, H.
Deposit date:2019-08-12
Release date:2020-01-15
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility.
Angew.Chem.Int.Ed.Engl., 59, 2020
6SJ1
DownloadVisualize
BU of 6sj1 by Molmil
Amidohydrolase, AHS
Descriptor: Amidohydrolase, ZINC ION
Authors:Naismith, J.H, Song, H.
Deposit date:2019-08-12
Release date:2020-01-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility.
Angew.Chem.Int.Ed.Engl., 59, 2020
2AFF
DownloadVisualize
BU of 2aff by Molmil
The solution structure of the Ki67FHA/hNIFK(226-269)3P complex
Descriptor: Antigen KI-67, MKI67 FHA domain interacting nucleolar phosphoprotein
Authors:Byeon, I.-J.L, Li, H, Song, H, Gronenborn, A.M, Tsai, M.D.
Deposit date:2005-07-25
Release date:2005-10-25
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Sequential phosphorylation and multisite interactions characterize specific target recognition by the FHA domain of Ki67.
Nat.Struct.Mol.Biol., 12, 2005
1PKD
DownloadVisualize
BU of 1pkd by Molmil
THE CRYSTAL STRUCTURE OF UCN-01 IN COMPLEX WITH PHOSPHO-CDK2/CYCLIN A
Descriptor: 7-HYDROXYSTAUROSPORINE, Cell division protein kinase 2, Cyclin A2
Authors:Johnson, L.N, De Moliner, E, Brown, N.R, Song, H.
Deposit date:2003-06-05
Release date:2003-06-24
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Crystal Structure of UCN-01 in Complex with Phospho-CDK2/Cyclin A
To be Published
1C76
DownloadVisualize
BU of 1c76 by Molmil
STAPHYLOKINASE (SAK) MONOMER
Descriptor: STAPHYLOKINASE
Authors:Rao, Z, Jiang, F, Liu, Y, Zhang, X, Chen, Y, Bartlam, M, Song, H, Ding, Y.
Deposit date:2000-02-01
Release date:2000-08-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of Staphylokinase Dimer Offers New Clue to Reduction of Immunogenicity
To be published
2A1R
DownloadVisualize
BU of 2a1r by Molmil
Crystal structure of PARN nuclease domain
Descriptor: 5'-R(*AP*AP*A)-3', Poly(A)-specific ribonuclease PARN
Authors:Wu, M, Song, H.
Deposit date:2005-06-21
Release date:2005-12-20
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural insight into poly(A) binding and catalytic mechanism of human PARN
Embo J., 24, 2005
2A1S
DownloadVisualize
BU of 2a1s by Molmil
Crystal structure of native PARN nuclease domain
Descriptor: Poly(A)-specific ribonuclease PARN
Authors:Wu, M, Song, H.
Deposit date:2005-06-21
Release date:2005-12-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural insight into poly(A) binding and catalytic mechanism of human PARN
Embo J., 24, 2005
7TRC
DownloadVisualize
BU of 7trc by Molmil
Human telomerase H/ACA RNP at 3.3 Angstrom
Descriptor: H/ACA ribonucleoprotein complex subunit 1, H/ACA ribonucleoprotein complex subunit 2, H/ACA ribonucleoprotein complex subunit 3, ...
Authors:Liu, B, He, Y, Wang, Y, Song, H, Zhou, Z.H, Feigon, J.
Deposit date:2022-01-28
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of active human telomerase with telomere shelterin protein TPP1.
Nature, 604, 2022
7TRD
DownloadVisualize
BU of 7trd by Molmil
Human telomerase catalytic core structure at 3.3 Angstrom
Descriptor: Telomerase RNA, partial sequence, Telomerase reverse transcriptase, ...
Authors:Liu, B, He, Y, Wang, Y, Song, H, Zhou, Z.H, Feigon, J.
Deposit date:2022-01-28
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of active human telomerase with telomere shelterin protein TPP1.
Nature, 604, 2022
7TRF
DownloadVisualize
BU of 7trf by Molmil
Human telomerase catalytic core RNP with H2A/H2B
Descriptor: Histone H2A, Histone H2B type 1-C/E/F/G/I, Telomerase RNA, ...
Authors:Liu, B, He, Y, Wang, Y, Song, H, Zhou, Z.H, Feigon, J.
Deposit date:2022-01-28
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of active human telomerase with telomere shelterin protein TPP1.
Nature, 604, 2022
7TRE
DownloadVisualize
BU of 7tre by Molmil
Human telomerase catalytic core with shelterin protein TPP1
Descriptor: Adrenocortical dysplasia protein homolog, Telomerase RNA, partial sequence, ...
Authors:Liu, B, He, Y, Wang, Y, Song, H, Zhou, Z.H, Feigon, J.
Deposit date:2022-01-28
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of active human telomerase with telomere shelterin protein TPP1.
Nature, 604, 2022
5JXE
DownloadVisualize
BU of 5jxe by Molmil
Human PD-1 ectodomain complexed with Pembrolizumab Fab
Descriptor: Pembrolizumab Fab heavy chain, Pembrolizumab Fab light chain, Programmed cell death protein 1
Authors:Na, Z, Bharath, S.R, Song, H.
Deposit date:2016-05-13
Release date:2016-08-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for blocking PD-1-mediated immune suppression by therapeutic antibody pembrolizumab.
Cell Res., 27, 2017

219869

数据于2024-05-15公开中

PDB statisticsPDBj update infoContact PDBjnumon