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PDB: 1988 results

5AQW
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BU of 5aqw by Molmil
Fragment-based screening of HSP70 sheds light on the functional role of ATP-binding site residues
Descriptor: (1S,2R,3R,5R)-3-(hydroxymethyl)-5-(quinazolin-4-ylamino)cyclopentane-1,2-diol, (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, 1,2-ETHANEDIOL, ...
Authors:Jones, A.M, Westwood, I.M, Osborne, J.D, Matthews, T.P, Cheeseman, M.D, Rowlands, M.G, Jeganathan, F, Burke, R, Lee, D, Kadi, N, Liu, M, Richards, M, McAndrew, C, Yahya, N, Dobson, S.E, Jones, K, Workman, P, Collins, I, van Montfort, R.L.M.
Deposit date:2015-09-22
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:A fragment-based approach applied to a highly flexible target: Insights and challenges towards the inhibition of HSP70 isoforms.
Sci Rep, 6, 2016
5AQM
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Fragment-based screening of HSP70 sheds light on the functional role of ATP-binding site residues
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BAG FAMILY MOLECULAR CHAPERONE REGULATOR 1, GLYCEROL, ...
Authors:Jones, A.M, Westwood, I.M, Osborne, J.D, Matthews, T.P, Cheeseman, M.D, Rowlands, M.G, Jeganathan, F, Burke, R, Lee, D, Kadi, N, Liu, M, Richards, M, McAndrew, C, Yahya, N, Dobson, S.E, Jones, K, Workman, P, Collins, I, van Montfort, R.L.M.
Deposit date:2015-09-22
Release date:2016-10-05
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:A fragment-based approach applied to a highly flexible target: Insights and challenges towards the inhibition of HSP70 isoforms.
Sci Rep, 6, 2016
3TFS
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BU of 3tfs by Molmil
Ternary complex structure of DNA polymerase beta with a gapped DNA substrate and a, b dAMP(CFH)PP in the active site: Stereoselective binding of (S) isomer
Descriptor: 2'-deoxy-5'-O-[(S)-{(S)-fluoro[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}(hydroxy)phosphoryl]adenosine, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*TP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ...
Authors:Chamberlain, B.T, Batra, V.K, Beard, W.A, Kadina, A.P, Shock, D.D, Kashemirov, B.A, McKenna, C.E, Goodman, M.F, Wilson, S.H.
Deposit date:2011-08-16
Release date:2012-03-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Stereospecific Formation of a Ternary Complex of (S)-alpha, beta-Fluoromethylene-dATP with DNA Pol beta.
Chembiochem, 13, 2012
3TU8
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Crystal Structure of the Burkholderia Lethal Factor 1 (BLF1)
Descriptor: BROMIDE ION, Burkholderia Lethal Factor 1 (BLF1)
Authors:Cruz, A, Hautbergue, G.M, Artymiuk, P.J, Baker, P.J, Chang, C.T, Mahadi, N.M, Mobbs, G.W, Mohamed, R, Nathan, S, Partridge, L.J, Raih, M.F, Ruzheinikov, S.N, Sedelnikova, S.E, Wilson, S.A, Rice, D.W.
Deposit date:2011-09-16
Release date:2011-11-30
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:A Burkholderia pseudomallei toxin inhibits helicase activity of translation factor eIF4A.
Science, 334, 2011
6OJ3
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BU of 6oj3 by Molmil
In situ structure of rotavirus VP1 RNA-dependent RNA polymerase (TLP)
Descriptor: Inner capsid protein VP2, RNA-directed RNA polymerase
Authors:Jenni, S, Salgado, E.N, Herrmann, T, Li, Z, Grant, T, Grigorieff, N, Trapani, S, Estrozi, L.F, Harrison, S.C.
Deposit date:2019-04-10
Release date:2019-04-24
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:In situ Structure of Rotavirus VP1 RNA-Dependent RNA Polymerase.
J.Mol.Biol., 431, 2019
3TUA
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BU of 3tua by Molmil
Crystal Structure of the Burkholderia Lethal Factor 1 (BLF1) C94S mutant
Descriptor: Burkholderia Lethal Factor 1 (BLF1)
Authors:Cruz, A, Hautbergue, G.M, Artymiuk, P.J, Baker, P.J, Chang, C.T, Mahadi, N.M, Mobbs, G.W, Mohamed, R, Nathan, S, Partridge, L.J, Raih, M.F, Ruzheinikov, S.N, Sedelnikova, S.E, Wilson, S.A, Rice, D.W.
Deposit date:2011-09-16
Release date:2011-11-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:A Burkholderia pseudomallei toxin inhibits helicase activity of translation factor eIF4A.
Science, 334, 2011
6OJ4
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BU of 6oj4 by Molmil
In situ structure of rotavirus VP1 RNA-dependent RNA polymerase (DLP)
Descriptor: Inner capsid protein VP2, RNA-directed RNA polymerase
Authors:Jenni, S, Salgado, E.N, Herrmann, T, Li, Z, Grant, T, Grigorieff, N, Trapani, S, Estrozi, L.F, Harrison, S.C.
Deposit date:2019-04-10
Release date:2019-04-24
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:In situ Structure of Rotavirus VP1 RNA-Dependent RNA Polymerase.
J.Mol.Biol., 431, 2019
5MW9
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BU of 5mw9 by Molmil
Complex between the Leucine Zipper (LZ) and Centrosomin-motif 2 (CM2) domains of Drosophila melanogaster Centrosomin (Cnn) - L535E mutant form
Descriptor: Centrosomin, ZINC ION
Authors:Feng, Z, Johnson, S, Raff, J.W, Lea, S.M.
Deposit date:2017-01-18
Release date:2017-06-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis for Mitotic Centrosome Assembly in Flies.
Cell, 169, 2017
6OJ6
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BU of 6oj6 by Molmil
In situ structure of rotavirus VP1 RNA-dependent RNA polymerase (DLP_RNA)
Descriptor: Inner capsid protein VP2, RNA-directed RNA polymerase, Template, ...
Authors:Jenni, S, Salgado, E.N, Herrmann, T, Li, Z, Grant, T, Grigorieff, N, Trapani, S, Estrozi, L.F, Harrison, S.C.
Deposit date:2019-04-10
Release date:2019-04-24
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:In situ Structure of Rotavirus VP1 RNA-Dependent RNA Polymerase.
J.Mol.Biol., 431, 2019
6PL5
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BU of 6pl5 by Molmil
Structural coordination of polymerization and crosslinking by a peptidoglycan synthase complex
Descriptor: Penicillin-binding protein 2/cell division protein FtsI, Peptidoglycan glycosyltransferase RodA, Unknown peptide
Authors:Sjodt, M, Rohs, P.D.A, Erlandson, S.C, Zheng, S, Rudner, D.Z, Bernhardt, T.G, Kruse, A.C.
Deposit date:2019-06-30
Release date:2020-03-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural coordination of polymerization and crosslinking by a SEDS-bPBP peptidoglycan synthase complex.
Nat Microbiol, 5, 2020
6PP7
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BU of 6pp7 by Molmil
ClpX in ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Fei, X, Jenni, S, Harrison, S.C, Sauer, R.T.
Deposit date:2019-07-05
Release date:2020-03-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.05 Å)
Cite:Structures of the ATP-fueled ClpXP proteolytic machine bound to protein substrate.
Elife, 9, 2020
4ZI4
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BU of 4zi4 by Molmil
YopH W354H Yersinia enterocolitica PTPase bond with Divanadate glycerol ester in the active site
Descriptor: Divanadate Glycerol ester, Tyrosine-protein phosphatase YopH, VANADATE ION
Authors:Moise, G.E, Johnson, S.J, Hengge, A.C.
Deposit date:2015-04-27
Release date:2015-10-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.121 Å)
Cite:Conservative Tryptophan Mutants of the Protein Tyrosine Phosphatase YopH Exhibit Impaired WPD-Loop Function and Crystallize with Divanadate Esters in Their Active Sites.
Biochemistry, 54, 2015
6POD
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BU of 6pod by Molmil
ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ATP-dependent Clp protease proteolytic subunit, ...
Authors:Fei, X, Jenni, S, Harrison, S.C, Sauer, R.T.
Deposit date:2019-07-03
Release date:2020-03-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.05 Å)
Cite:Structures of the ATP-fueled ClpXP proteolytic machine bound to protein substrate.
Elife, 9, 2020
6PP5
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BU of 6pp5 by Molmil
ClpX in ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 4
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Fei, X, Jenni, S, Harrison, S.C, Sauer, R.T.
Deposit date:2019-07-05
Release date:2020-03-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.98 Å)
Cite:Structures of the ATP-fueled ClpXP proteolytic machine bound to protein substrate.
Elife, 9, 2020
6PO3
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BU of 6po3 by Molmil
ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ATP-dependent Clp protease proteolytic subunit, ...
Authors:Fei, X, Jenni, S, Harrison, S.C, Sauer, R.T.
Deposit date:2019-07-03
Release date:2020-03-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.28 Å)
Cite:Structures of the ATP-fueled ClpXP proteolytic machine bound to protein substrate.
Elife, 9, 2020
6POS
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BU of 6pos by Molmil
ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ATP-dependent Clp protease proteolytic subunit, ...
Authors:Fei, X, Jenni, S, Harrison, S.C, Sauer, R.T.
Deposit date:2019-07-05
Release date:2020-03-11
Method:ELECTRON MICROSCOPY (4.12 Å)
Cite:Structures of the ATP-fueled ClpXP proteolytic machine bound to protein substrate.
Elife, 9, 2020
6PP6
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BU of 6pp6 by Molmil
ClpX in ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Fei, X, Jenni, S, Harrison, S.C, Sauer, R.T.
Deposit date:2019-07-05
Release date:2020-03-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.28 Å)
Cite:Structures of the ATP-fueled ClpXP proteolytic machine bound to protein substrate.
Elife, 9, 2020
6PO1
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BU of 6po1 by Molmil
ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 4
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ATP-dependent Clp protease proteolytic subunit, ...
Authors:Fei, X, Jenni, S, Harrison, S.C, Sauer, R.T.
Deposit date:2019-07-03
Release date:2020-03-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structures of the ATP-fueled ClpXP proteolytic machine bound to protein substrate.
Elife, 9, 2020
6PP8
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BU of 6pp8 by Molmil
ClpX in ClpX-ClpP complex bound to substrate and ATP-gamma-S, class 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Fei, X, Jenni, S, Harrison, S.C, Sauer, R.T.
Deposit date:2019-07-05
Release date:2020-03-11
Method:ELECTRON MICROSCOPY (4.12 Å)
Cite:Structures of the ATP-fueled ClpXP proteolytic machine bound to protein substrate.
Elife, 9, 2020
5KTB
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BU of 5ktb by Molmil
Structure of a complex between S. cerevisiae Csm1 and Mam1
Descriptor: Monopolin complex subunit CSM1, Monopolin complex subunit MAM1
Authors:Corbett, K.D, Harrison, S.C.
Deposit date:2016-07-11
Release date:2016-07-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Molecular architecture of the yeast monopolin complex.
Cell Rep, 1, 2012
7UML
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BU of 7uml by Molmil
Structure of vesicular stomatitis virus (local reconstruction, 3.5 A resolution)
Descriptor: Matrix protein, Nucleoprotein, RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')
Authors:Jenni, S, Horwitz, J.A, Bloyet, L.-M, Whelan, S.P.J, Harrison, S.C.
Deposit date:2022-04-07
Release date:2022-04-20
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Visualizing molecular interactions that determine assembly of a bullet-shaped vesicular stomatitis virus particle.
Nat Commun, 13, 2022
7UMK
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BU of 7umk by Molmil
Structure of vesicular stomatitis virus (helical reconstruction, 4.1 A resolution)
Descriptor: Matrix protein, Nucleoprotein, RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')
Authors:Jenni, S, Horwitz, J.A, Bloyet, L.-M, Whelan, S.P.J, Harrison, S.C.
Deposit date:2022-04-07
Release date:2022-04-20
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Visualizing molecular interactions that determine assembly of a bullet-shaped vesicular stomatitis virus particle.
Nat Commun, 13, 2022
6XCJ
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BU of 6xcj by Molmil
Crystal Structure of DH650 Fab from a Rhesus Macaque in Complex with HIV-1 gp120 Core
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DH650 Fab Heavy Chain, DH650 Fab Light Chain, ...
Authors:Raymond, D.D, Chug, H, Harrison, S.C.
Deposit date:2020-06-08
Release date:2020-12-02
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Recapitulation of HIV-1 Env-antibody coevolution in macaques leading to neutralization breadth.
Science, 371, 2021
6OJ5
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BU of 6oj5 by Molmil
In situ structure of rotavirus VP1 RNA-dependent RNA polymerase (TLP_RNA)
Descriptor: Inner capsid protein VP2, RNA-directed RNA polymerase
Authors:Jenni, S, Salgado, E.N, Herrmann, T, Li, Z, Grant, T, Grigorieff, N, Trapani, S, Estrozi, L.F, Harrison, S.C.
Deposit date:2019-04-10
Release date:2019-04-24
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (5.2 Å)
Cite:In situ Structure of Rotavirus VP1 RNA-Dependent RNA Polymerase.
J.Mol.Biol., 431, 2019
6XED
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BU of 6xed by Molmil
Crystal Structure of the PTP1B YopH WPD loop Chimera 3 bound to tungstate
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BENZAMIDINE, MAGNESIUM ION, ...
Authors:Olsen, K.J, Shen, R, Johnson, S.J, Hengge, A.C.
Deposit date:2020-06-12
Release date:2021-12-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.795 Å)
Cite:Insights into the importance of WPD-loop sequence for activity and structure in protein tyrosine phosphatases.
Chem Sci, 13, 2022

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数据于2024-11-06公开中

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