Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1971 results

1L3U
DownloadVisualize
BU of 1l3u by Molmil
Crystal Structure of Bacillus DNA Polymerase I Fragment product complex with 11 base pairs of duplex DNA following addition of a dTTP and a dATP residue.
Descriptor: 5'-D(*GP*AP*C*GP*TP*AP*CP*GP*TP*GP*AP*TP*CP*GP*CP*A)-3', 5'-D(*GP*CP*GP*AP*TP*CP*AP*CP*GP*TP*A)-3', DNA Polymerase I, ...
Authors:Johnson, S.J, Taylor, J.S, Beese, L.S.
Deposit date:2002-03-01
Release date:2003-03-25
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Processive DNA synthesis observed in a polymerase crystal suggests a mechanism for the prevention of frameshift mutations
Proc.Natl.Acad.Sci.USA, 100, 2003
1L5U
DownloadVisualize
BU of 1l5u by Molmil
Crystal Structure of Bacillus DNA Polymerase I Fragment product complex with 12 base pairs of duplex DNA following addition of a dTTP, a dATP, and a dCTP residue.
Descriptor: 5'-D(*GP*A*CP*GP*TP*AP*CP*GP*TP*GP*AP*TP*CP*GP*CP*A)-3', 5'-D(*GP*CP*GP*AP*TP*CP*AP*CP*GP*TP*AP*C)-3', DNA Polymerase I, ...
Authors:Johnson, S.J, Taylor, J.S, Beese, L.S.
Deposit date:2002-03-08
Release date:2003-03-25
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Processive DNA synthesis observed in a polymerase crystal suggests a mechanism for the prevention of frameshift mutations
Proc.Natl.Acad.Sci.USA, 100, 2003
5G47
DownloadVisualize
BU of 5g47 by Molmil
Structure of Gc glycoprotein from severe fever with thrombocytopenia syndrome virus in the trimeric postfusion conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, SFTSV GC
Authors:Halldorsson, S, Behrens, A.J, Harlos, K, Huiskonen, J.T, Elliott, R.M, Crispin, M, Brennan, B, Bowden, T.A.
Deposit date:2016-05-05
Release date:2016-07-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure of a Phleboviral Envelope Glycoprotein Reveals a Consolidated Model of Membrane Fusion.
Proc.Natl.Acad.Sci.USA, 113, 2016
1ZA6
DownloadVisualize
BU of 1za6 by Molmil
The structure of an antitumor CH2-domain-deleted humanized antibody
Descriptor: IGG Heavy chain, IGG Light chain
Authors:Larson, S.B, Day, J.S, Glaser, S, Braslawsky, G, McPherson, A.
Deposit date:2005-04-05
Release date:2005-05-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Structure of an Antitumor C(H)2-domain-deleted Humanized Antibody.
J.Mol.Biol., 348, 2005
4HIJ
DownloadVisualize
BU of 4hij by Molmil
Anti-Streptococcus pneumoniae 23F Fab 023.102 with bound L-rhamnose-(1-2)-alpha-D-galactose-(3-O)-phosphate-2-glycerol
Descriptor: Fab 023.102 heavy chain, Fab 023.102 light chain, GLYCEROL, ...
Authors:Bryson, S, Risnes, L, Damgupta, S, Thomson, C.A, Schrader, J.W, Pai, E.F.
Deposit date:2012-10-11
Release date:2013-08-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of Preferred Human IgV Genes-Based Protective Antibodies Identify How Conserved Residues Contact Diverse Antigens and Assign Source of Specificity to CDR3 Loop Variation.
J. Immunol., 196, 2016
4HIE
DownloadVisualize
BU of 4hie by Molmil
Anti-Streptococcus pneumoniae 23F Fab 023.102
Descriptor: Antibody 023.102, Fab 023.102
Authors:Bryson, S, Risnes, L, Damgupta, S, Thomson, C.A, Schrader, J.W, Pai, E.F.
Deposit date:2012-10-11
Release date:2013-08-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of Preferred Human IgV Genes-Based Protective Antibodies Identify How Conserved Residues Contact Diverse Antigens and Assign Source of Specificity to CDR3 Loop Variation.
J. Immunol., 196, 2016
4HII
DownloadVisualize
BU of 4hii by Molmil
Anti-Streptococcus pneumoniae 23F Fab 023.102 with bound rhamnose-galactose
Descriptor: Fab 023.102 heavy chain, Fab 023.102 light chain, alpha-L-rhamnopyranose-(1-2)-beta-D-galactopyranose
Authors:Bryson, S, Risnes, L, Damgupta, S, Thomson, C.A, Schrader, J.W, Pai, E.F.
Deposit date:2012-10-11
Release date:2013-08-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of Preferred Human IgV Genes-Based Protective Antibodies Identify How Conserved Residues Contact Diverse Antigens and Assign Source of Specificity to CDR3 Loop Variation.
J. Immunol., 196, 2016
4HH9
DownloadVisualize
BU of 4hh9 by Molmil
Anti-Human Cytomegalovirus (HCMV) Fab KE5
Descriptor: Fab KE5, heavy chain, light chain
Authors:Bryson, S, Risnes, L, Damgupta, S, Thomson, C.A, Pfoh, R, Schrader, J.W, Pai, E.F.
Deposit date:2012-10-09
Release date:2013-10-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures of Preferred Human IgV Genes-Based Protective Antibodies Identify How Conserved Residues Contact Diverse Antigens and Assign Source of Specificity to CDR3 Loop Variation.
J. Immunol., 196, 2016
2P0J
DownloadVisualize
BU of 2p0j by Molmil
Structure of restriction endonuclease BstYI bound to non-cognate DNA
Descriptor: 5'-D(*AP*TP*GP*AP*AP*TP*CP*CP*AP*TP*A)-3', 5'-D(*TP*AP*TP*GP*GP*AP*TP*TP*CP*AP*T)-3', BstYI
Authors:Townson, S.A, Samuelson, J.C, Bao, Y, Xu, S.Y, Aggarwal, A.K.
Deposit date:2007-02-28
Release date:2007-05-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:BstYI Bound to Noncognate DNA Reveals a "Hemispecific" Complex: Implications for DNA Scanning.
Structure, 15, 2007
4HIH
DownloadVisualize
BU of 4hih by Molmil
Anti-Streptococcus pneumoniae 23F Fab 023.102 with bound rhamnose.
Descriptor: Antibody 023.102, Fab 023.102, alpha-L-rhamnopyranose
Authors:Bryson, S, Risnes, L, Damgupta, S, Thomson, C.A, Schrader, J.W, Pai, E.F.
Deposit date:2012-10-11
Release date:2013-08-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of Preferred Human IgV Genes-Based Protective Antibodies Identify How Conserved Residues Contact Diverse Antigens and Assign Source of Specificity to CDR3 Loop Variation.
J. Immunol., 196, 2016
3R7O
DownloadVisualize
BU of 3r7o by Molmil
Structure of dually phosphorylated c-MET receptor kinase in complex with an MK-2461 analog
Descriptor: Hepatocyte growth factor receptor, N-[(2R)-1,4-dioxan-2-ylmethyl]-N-methyl-N'-{5-oxo-3-[1-(piperidin-4-yl)-1H-pyrazol-4-yl]-5H-benzo[4,5]cyclohepta[1,2-b]pyridin-7-yl}sulfuric diamide
Authors:Soisson, S.M, Rickert, K, Patel, S.B, Munshi, S, Lumb, K.J.
Deposit date:2011-03-22
Release date:2012-02-01
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for selective small molecule kinase inhibition of activated c-Met.
J.Biol.Chem., 286, 2011
4QU4
DownloadVisualize
BU of 4qu4 by Molmil
Improved refinement of the Mtr4 apo crystal structure
Descriptor: ATP-dependent RNA helicase DOB1, PHOSPHATE ION
Authors:Johnson, S.J, Taylor, L.L.
Deposit date:2014-07-10
Release date:2014-12-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.392 Å)
Cite:The Mtr4 ratchet helix and arch domain both function to promote RNA unwinding.
Nucleic Acids Res., 42, 2014
3TY0
DownloadVisualize
BU of 3ty0 by Molmil
Structure of PPARgamma ligand binding domain in complex with (R)-5-(3-((3-(6-methoxybenzo[d]isoxazol-3-yl)-2-oxo-2,3-dihydro-1H-benzo[d]imidazol-1-yl)methyl)phenyl)-5-methyloxazolidine-2,4-dione
Descriptor: (5R)-5-(3-{[3-(6-methoxy-1,2-benzoxazol-3-yl)-2-oxo-2,3-dihydro-1H-benzimidazol-1-yl]methyl}phenyl)-5-methyl-1,3-oxazolidine-2,4-dione, Peroxisome proliferator-activated receptor gamma
Authors:Soisson, S.M, Meinke, P.M, McKeever, B, Liu, W.
Deposit date:2011-09-23
Release date:2011-11-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Benzimidazolones: a new class of selective peroxisome proliferator-activated receptor gamma (PPAR-gamma) modulators.
J.Med.Chem., 54, 2011
2FZ2
DownloadVisualize
BU of 2fz2 by Molmil
Structure of Turnip Yellow Mosaic Virus at 100 K
Descriptor: 5'-R(*CP*CP*C)-3', Coat protein
Authors:Larson, S.B, Lucas, R.W, McPherson, A.
Deposit date:2006-02-08
Release date:2006-02-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The RNA of turnip yellow mosaic virus exhibits icosahedral order.
Virology, 334, 2005
2FZ1
DownloadVisualize
BU of 2fz1 by Molmil
Structure of Empty Head Turnip Yellow Mosaic Virus (ATC) at 100 K
Descriptor: Coat protein
Authors:Larson, S.B, Lucas, R.W, McPherson, A.
Deposit date:2006-02-08
Release date:2006-02-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The RNA of turnip yellow mosaic virus exhibits icosahedral order.
Virology, 334, 2005
4QLJ
DownloadVisualize
BU of 4qlj by Molmil
Crystal structure of rice BGlu1 E386G/Y341A/Q187A mutant complexed with cellotetraose
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-glucosidase 7, SULFATE ION, ...
Authors:Pengthaisong, S, Ketudat Cairns, J.R.
Deposit date:2014-06-12
Release date:2015-06-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Effects of active site cleft residues on oligosaccharide binding, hydrolysis, and glycosynthase activities of rice BGlu1 and its mutants
Protein Sci., 23, 2014
4QLL
DownloadVisualize
BU of 4qll by Molmil
Crystal structure of rice BGlu1 E176Q/Y341A/Q187A mutant complexed with cellotetraose
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-glucosidase 7, SULFATE ION, ...
Authors:Pengthaisong, S, Ketudat Cairns, J.R.
Deposit date:2014-06-12
Release date:2015-06-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Effects of active site cleft residues on oligosaccharide binding, hydrolysis, and glycosynthase activities of rice BGlu1 and its mutants
Protein Sci., 23, 2014
4QLK
DownloadVisualize
BU of 4qlk by Molmil
Crystal structure of rice BGlu1 E176Q/Y341A mutant complexed with cellotetraose
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-glucosidase 7, SULFATE ION, ...
Authors:Pengthaisong, S, Ketudat Cairns, J.R.
Deposit date:2014-06-12
Release date:2015-06-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Effects of active site cleft residues on oligosaccharide binding, hydrolysis, and glycosynthase activities of rice BGlu1 and its mutants
Protein Sci., 23, 2014
4HNN
DownloadVisualize
BU of 4hnn by Molmil
Dihydrodipicolinate Synthase from the common grapevine with pyruvate and lysine
Descriptor: Dihydrodipicolinate synthase, LYSINE
Authors:Atkinson, S.C, Dobson, R.C.J, Perugini, M.A.
Deposit date:2012-10-19
Release date:2013-09-04
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural, kinetic and computational investigation of Vitis vinifera DHDPS reveals new insight into the mechanism of lysine-mediated allosteric inhibition.
Plant Mol.Biol., 81, 2013
4I7W
DownloadVisualize
BU of 4i7w by Molmil
Agrobacterium tumefaciens DHDPS with lysine and pyruvate
Descriptor: Dihydrodipicolinate synthase, GLYCEROL, LYSINE
Authors:Atkinson, S.C, Dogovski, C, Dobson, R.C.J, Perugini, M.A.
Deposit date:2012-12-01
Release date:2013-12-04
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure, function and allostery of the bona fide DHDPS from the plant pathogen Agrobacterium tumefaciens
To be Published
4I7V
DownloadVisualize
BU of 4i7v by Molmil
Agrobacterium tumefaciens DHDPS with pyruvate
Descriptor: Dihydrodipicolinate synthase
Authors:Atkinson, S.C, Dogovski, C, Dobson, R.C.J, Perugini, M.A.
Deposit date:2012-12-01
Release date:2013-12-04
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure, function and allostery of the bona fide DHDPS from the plant pathogen Agrobacterium tumefaciens
To be Published
4I7U
DownloadVisualize
BU of 4i7u by Molmil
Dihydrodipicolinate Synthase of Agrobacterium tumefaciens
Descriptor: Dihydrodipicolinate synthase, GLYCEROL
Authors:Atkinson, S.C, Dogovski, C, Dobson, R.C.J, Perugini, M.A.
Deposit date:2012-11-30
Release date:2013-12-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure, function and allostery of the bona fide DHDPS from the plant pathogen Agrobacterium tumefaciens
To be Published
2TBV
DownloadVisualize
BU of 2tbv by Molmil
STRUCTURE OF TOMATO BUSHY STUNT VIRUS. V. COAT PROTEIN SEQUENCE DETERMINATION AND ITS STRUCTURAL IMPLICATIONS
Descriptor: CALCIUM ION, TOMATO BUSHY STUNT VIRUS
Authors:Harrison, S.C.
Deposit date:1984-06-22
Release date:1984-07-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of tomato bushy stunt virus. V. Coat protein sequence determination and its structural implications
J.Mol.Biol., 177, 1984
1RFA
DownloadVisualize
BU of 1rfa by Molmil
NMR SOLUTION STRUCTURE OF THE RAS-BINDING DOMAIN OF C-RAF-1
Descriptor: RAF1
Authors:Emerson, S.D, Madison, V.S, Palermo, R.E, Waugh, D.S, Scheffler, J.E, Tsao, K.-L, Kiefer, S.E, Liu, S.P, Fry, D.C.
Deposit date:1995-04-26
Release date:1996-06-20
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the Ras-binding domain of c-Raf-1 and identification of its Ras interaction surface.
Biochemistry, 34, 1995
1U8N
DownloadVisualize
BU of 1u8n by Molmil
Crystal structure of the HIV-1 Cross Neutralizing Monoclonal Antibody 2F5 in complex with gp41 Peptide ELDKFAS
Descriptor: ANTIBODY 2F5 (HEAVY CHAIN), ANTIBODY 2F5 (LIGHT CHAIN), GP41 PEPTIDE
Authors:Bryson, S, Julien, J.-P, Hynes, R.C, Pai, E.F.
Deposit date:2004-08-06
Release date:2004-10-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Crystallographic definition of the epitope promiscuity of the broadly neutralizing anti-human immunodeficiency virus type 1 antibody 2F5: vaccine design implications
J.Virol., 83, 2009

222926

数据于2024-07-24公开中

PDB statisticsPDBj update infoContact PDBjnumon