3TY0

Structure of PPARgamma ligand binding domain in complex with (R)-5-(3-((3-(6-methoxybenzo[d]isoxazol-3-yl)-2-oxo-2,3-dihydro-1H-benzo[d]imidazol-1-yl)methyl)phenyl)-5-methyloxazolidine-2,4-dione

Summary for 3TY0

DescriptorPeroxisome proliferator-activated receptor gamma, (5R)-5-(3-{[3-(6-methoxy-1,2-benzoxazol-3-yl)-2-oxo-2,3-dihydro-1H-benzimidazol-1-yl]methyl}phenyl)-5-methyl-1,3-oxazolidine-2,4-dione (3 entities in total)
Functional Keywordsnuclear receptor ligand binding domain, transcription regulator
Biological sourceHomo sapiens (human)
Cellular locationNucleus P37231
Total number of polymer chains2
Total molecular weight64156.22
Authors
Soisson, S.M.,Meinke, P.M.,McKeever, B.,Liu, W. (deposition date: 2011-09-23, release date: 2011-11-23, Last modification date: 2017-11-08)
Primary citation
Liu, W.,Lau, F.,Liu, K.,Wood, H.B.,Zhou, G.,Chen, Y.,Li, Y.,Akiyama, T.E.,Castriota, G.,Einstein, M.,Wang, C.,McCann, M.E.,Doebber, T.W.,Wu, M.,Chang, C.H.,McNamara, L.,McKeever, B.,Mosley, R.T.,Berger, J.P.,Meinke, P.T.
Benzimidazolones: a new class of selective peroxisome proliferator-activated receptor gamma (PPAR-gamma) modulators.
J.Med.Chem., 54:8541-8554, 2011
PubMed: 22070604 (PDB entries with the same primary citation)
DOI: 10.1021/jm201061j
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2 Å)
NMR Information
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.27742.5%6.8%14.8%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation report