Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1971 results

3IDN
DownloadVisualize
BU of 3idn by Molmil
Crystal structure of the HIV-1 Cross Neutralizing Monoclonal Antibody 2F5 Fab' fragment in complex with gp41 Peptide analog ELD(Paf)WAS
Descriptor: 2F5 Fab heavy chain, 2F5 Fab light chain, gp41 MPER peptide analog
Authors:Julien, J.-P, Bryson, S, Pai, E.F.
Deposit date:2009-07-21
Release date:2010-02-02
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystallographic definition of the epitope promiscuity of the broadly neutralizing anti-human immunodeficiency virus type 1 antibody 2F5: vaccine design implications.
J.Virol., 83, 2009
3RNQ
DownloadVisualize
BU of 3rnq by Molmil
Crystal structure of the complex between the extracellular domains of mouse PD-1 mutant and PD-L2
Descriptor: Programmed cell death 1 ligand 2, Programmed cell death protein 1
Authors:Lazar-Molnar, E, Ramagopal, U.A, Nathenson, S.G, Almo, S.C.
Deposit date:2011-04-22
Release date:2011-06-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the complex between the extracellular domains of mouse PD-1 mutant and PD-L2
To be Published
3RBG
DownloadVisualize
BU of 3rbg by Molmil
Crystal structure analysis of Class-I MHC restricted T-cell associated molecule
Descriptor: Cytotoxic and regulatory T-cell molecule, PHOSPHATE ION
Authors:Rubinstein, R, Ramagopal, U.A, Toro, R, Nathenson, S.G, Fiser, A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
Deposit date:2011-03-29
Release date:2011-05-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Functional classification of immune regulatory proteins.
Structure, 21, 2013
1FVV
DownloadVisualize
BU of 1fvv by Molmil
THE STRUCTURE OF CDK2/CYCLIN A IN COMPLEX WITH AN OXINDOLE INHIBITOR
Descriptor: 4-[(7-OXO-7H-THIAZOLO[5,4-E]INDOL-8-YLMETHYL)-AMINO]-N-PYRIDIN-2-YL-BENZENESULFONAMIDE, CYCLIN A, CYCLIN-DEPENDENT KINASE 2
Authors:Davis, S.T, Benson, B.G, Bramson, H.N, Chapman, D.E, Dickerson, S.H, Dold, K.M, Eberwein, D.J, Edelstein, M, Frye, S.V, Gampe Jr, R.T, Griffin, R.J, Harris, P.A, Hassell, A.M, Holmes, W.D, Hunter, R.N, Knick, V.B, Lackey, K, Lovejoy, B, Luzzio, M.J, Murray, D, Parker, P, Rocque, W.J, Shewchuk, L, Veal, J.M, Walker, D.H, Kuyper, L.K.
Deposit date:2000-09-20
Release date:2001-01-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Prevention of chemotherapy-induced alopecia in rats by CDK inhibitors.
Science, 291, 2001
3RNK
DownloadVisualize
BU of 3rnk by Molmil
Crystal structure of the complex between mouse PD-1 mutant and PD-L2 IgV domain
Descriptor: Programmed cell death 1 ligand 2, Programmed cell death protein 1
Authors:Lazar-Molnar, E, Ramagopal, U.A, Cao, E, Nathenson, S.G, Almo, S.C.
Deposit date:2011-04-22
Release date:2011-06-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal structure of the complex between mouse PD-1 mutant and PD-L2 IgV domain
To be Published
3QKQ
DownloadVisualize
BU of 3qkq by Molmil
Protein Tyrosine Phosphatase 1B - W179F mutant bound with vanadate
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, Tyrosine-protein phosphatase non-receptor type 1, ...
Authors:Brandao, T.A.S, Johnson, S.J, Hengge, A.C.
Deposit date:2011-02-01
Release date:2012-08-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The molecular details of WPD-loop movement differ in the protein-tyrosine phosphatases YopH and PTP1B.
Arch.Biochem.Biophys., 525, 2012
5AI2
DownloadVisualize
BU of 5ai2 by Molmil
Anomalous Neutron phased crystal structure of 113Cd-substituted Perdeuterated Pyrococcus furiosus rubredoxin to 1.75A resolution at 295K
Descriptor: CADMIUM ION, RUBREDOXIN, deuterium(1+)
Authors:Cuypers, M.G, Mossou, E, Mason, S.A.
Deposit date:2015-02-11
Release date:2016-03-02
Last modified:2024-05-08
Method:NEUTRON DIFFRACTION (1.75 Å)
Cite:Macromolecular Structure Phasing by Neutron Anomalous Diffraction.
Sci.Rep., 6, 2016
1BPD
DownloadVisualize
BU of 1bpd by Molmil
CRYSTAL STRUCTURE OF RAT DNA POLYMERASE BETA: EVIDENCE FOR A COMMON POLYMERASE MECHANISM
Descriptor: DNA POLYMERASE BETA, PHOSPHATE ION
Authors:Sawaya, M.R, Pelletier, H, Kumar, A, Wilson, S.H, Kraut, J.
Deposit date:1994-04-12
Release date:1994-06-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Crystal structure of rat DNA polymerase beta: evidence for a common polymerase mechanism.
Science, 264, 1994
1BPB
DownloadVisualize
BU of 1bpb by Molmil
CRYSTAL STRUCTURE OF RAT DNA POLYMERASE BETA: EVIDENCE FOR A COMMON POLYMERASE MECHANISM
Descriptor: DNA POLYMERASE BETA
Authors:Sawaya, M.R, Pelletier, H, Kumar, A, Wilson, S.H, Kraut, J.
Deposit date:1994-04-12
Release date:1994-06-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of rat DNA polymerase beta: evidence for a common polymerase mechanism.
Science, 264, 1994
3ISB
DownloadVisualize
BU of 3isb by Molmil
Binary complex of human DNA polymerase beta with a gapped DNA
Descriptor: 5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3', 5'-D(P*GP*TP*CP*GP*G)-3', ...
Authors:Beard, W.A, Shock, D.D, Batra, V.K, Pedersen, L.C, Wilson, S.H.
Deposit date:2009-08-25
Release date:2009-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:DNA polymerase beta substrate specificity: side chain modulation of the "A-rule".
J.Biol.Chem., 284, 2009
1FVT
DownloadVisualize
BU of 1fvt by Molmil
THE STRUCTURE OF CYCLIN-DEPENDENT KINASE 2 (CDK2) IN COMPLEX WITH AN OXINDOLE INHIBITOR
Descriptor: 4-[(2Z)-2-(5-bromo-2-oxo-1,2-dihydro-3H-indol-3-ylidene)hydrazinyl]benzene-1-sulfonamide, CELL DIVISION PROTEIN KINASE 2
Authors:Davis, S.T, Benson, B.G, Bramson, H.N, Chapman, D.E, Dickerson, S.H, Dold, K.M, Eberwein, D.J, Edelstein, M, Frye, S.V, Gampe Jr, R.T, Griffin, R.J, Harris, P.A, Hassell, A.M, Holmes, W.D, Hunter, R.N, Knick, V.B, Lackey, K, Lovejoy, B, Luzzio, M.J, Murray, D, Parker, P, Rocque, W.J, Shewchuk, L, Veal, J.M, Walker, D.H, Kuyper, L.K.
Deposit date:2000-09-20
Release date:2001-01-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Prevention of chemotherapy-induced alopecia in rats by CDK inhibitors.
Science, 291, 2001
3RQ3
DownloadVisualize
BU of 3rq3 by Molmil
Structure of T-cell immunoreceptor with immunoglobulin and ITIM domains (TIGIT) in hexagonal crystal form
Descriptor: CHLORIDE ION, T cell immunoreceptor with Ig and ITIM domains
Authors:Ramagopal, U.A, Rubinstein, R, Guo, H, Samanta, D, Nathenson, S.G, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
Deposit date:2011-04-27
Release date:2011-06-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of T-cell immunoreceptor with immunoglobulin and ITIM domains (TIGIT) in hexagonal crystal form
To be published
3RRQ
DownloadVisualize
BU of 3rrq by Molmil
Crystal structure of the extracellular domain of human PD-1
Descriptor: Programmed cell death protein 1
Authors:Lazar-Molnar, E, Ramagopal, U.A, Nathenson, S.G, Almo, S.C.
Deposit date:2011-04-29
Release date:2012-05-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the extracellular domain of human PD-1
To be Published
2RAK
DownloadVisualize
BU of 2rak by Molmil
PI(3)P bound PX-BAR membrane remodeling unit of Sorting Nexin 9
Descriptor: 2-(BUTANOYLOXY)-1-{[(HYDROXY{[2,3,4,6-TETRAHYDROXY-5-(PHOSPHONOOXY)CYCLOHEXYL]OXY}PHOSPHORYL)OXY]METHYL}ETHYL BUTANOATE, Sorting nexin-9
Authors:Pylypenko, O, Lundmark, R, Rasmuson, E, Carlsson, S.R, Rak, A.
Deposit date:2007-09-16
Release date:2007-12-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:The PX-BAR membrane-remodeling unit of sorting nexin 9
Embo J., 26, 2007
4QPJ
DownloadVisualize
BU of 4qpj by Molmil
2.7 Angstrom Structure of a Phosphotransferase in Complex with a Receiver Domain
Descriptor: CALCIUM ION, CHLORIDE ION, Cell cycle response regulator CtrA, ...
Authors:Willett, J.W, Herrou, J, Crosson, S.
Deposit date:2014-06-23
Release date:2015-07-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.742 Å)
Cite:Structural asymmetry in a conserved signaling system that regulates division, replication, and virulence of an intracellular pathogen.
Proc.Natl.Acad.Sci.USA, 112, 2015
1XSE
DownloadVisualize
BU of 1xse by Molmil
Crystal Structure of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1
Descriptor: 11beta-hydroxysteroid dehydrogenase type 1, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Ogg, D, Elleby, B, Norstrom, C, Stefansson, K, Abrahmsen, L, Oppermann, U, Svensson, S.
Deposit date:2004-10-19
Release date:2004-11-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of guinea pig 11beta-hydroxysteroid dehydrogenase type 1 provides a model for enzyme-lipid bilayer interactions
J.Biol.Chem., 280, 2005
3ZXU
DownloadVisualize
BU of 3zxu by Molmil
Crystal structure of the Ctf19-Mcm21 kinetochore heterodimer from yeast
Descriptor: CALCIUM ION, CTF19, MCM21
Authors:Schmitzberger, F, Harrison, S.C.
Deposit date:2011-08-15
Release date:2012-03-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Rwd Domain: A Recurring Module in Kinetochore Architecture Shown by a Ctf19-Mcm21 Complex Structure.
Embo Rep., 13, 2012
4B8E
DownloadVisualize
BU of 4b8e by Molmil
PRY-SPRY domain of Trim25
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, E3 UBIQUITIN/ISG15 LIGASE TRIM25
Authors:Kershaw, N.J, D'Cruz, A.A, Nicola, N.A, Nicholson, S.E, Babon, J.J.
Deposit date:2012-08-27
Release date:2013-09-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.779 Å)
Cite:Crystal Structure of the Trim25 B30.2 (Pryspry) Domain: A Key Component of Antiviral Signaling.
Biochem.J., 456, 2013
2LM0
DownloadVisualize
BU of 2lm0 by Molmil
Solution structure of the AF4-AF9 complex
Descriptor: AF4/FMR2 family member 1/Protein AF-9 chimera
Authors:Leach, B.I, Kuntimaddi, A, Schmidt, C.R, Cierpicki, T, Johnson, S.A, Bushweller, J.H.
Deposit date:2011-11-18
Release date:2013-01-09
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Leukemia Fusion Target AF9 Is an Intrinsically Disordered Transcriptional Regulator that Recruits Multiple Partners via Coupled Folding and Binding.
Structure, 21, 2013
4AVK
DownloadVisualize
BU of 4avk by Molmil
Structure of trigonal FimH lectin domain crystal soaked with an alpha- D-mannoside O-linked to propynyl pyridine at 2.4A resolution
Descriptor: 3-(pyridin-3-yl)prop-2-yn-1-yl alpha-D-mannopyranoside, FIMH, NICKEL (II) ION, ...
Authors:Wellens, A, Lahmann, M, Touaibia, M, Vaucher, J, Oscarson, S, Roy, R, Remaut, H, Bouckaert, J.
Deposit date:2012-05-26
Release date:2012-06-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Tyrosine Gate as a Potential Entropic Lever in the Receptor-Binding Site of the Bacterial Adhesin Fimh.
Biochemistry, 51, 2012
1YHW
DownloadVisualize
BU of 1yhw by Molmil
Crystal Structure of PAK1 kinase domain with one point mutations (K299R)
Descriptor: Serine/threonine-protein kinase PAK 1
Authors:Lei, M, Robinson, M.A, Harrison, S.C.
Deposit date:2005-01-10
Release date:2005-05-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Active Conformation of the PAK1 Kinase Domain
Structure, 13, 2005
4AUU
DownloadVisualize
BU of 4auu by Molmil
Crystal structure of apo FimH lectin domain at 1.5 A resolution
Descriptor: 1,2-ETHANEDIOL, FIMH, NICKEL (II) ION, ...
Authors:Wellens, A, Lahmann, M, Touaibia, M, Vaucher, J, Oscarson, S, Roy, R, Remaut, H, Bouckaert, J.
Deposit date:2012-05-22
Release date:2012-06-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Tyrosine Gate as a Potential Entropic Lever in the Receptor-Binding Site of the Bacterial Adhesin Fimh.
Biochemistry, 51, 2012
4AR6
DownloadVisualize
BU of 4ar6 by Molmil
X-ray crystallographic structure of the reduced form perdeuterated Pyrococcus furiosus rubredoxin at 295 K (in quartz capillary) to 0.92 Angstroms resolution.
Descriptor: FE (III) ION, RUBREDOXIN
Authors:Cuypers, M.G, Mason, S.A, Blakeley, M.P, Mitchell, E.P, Haertlein, M, Forsyth, V.T.
Deposit date:2012-04-20
Release date:2012-12-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (0.92 Å)
Cite:Near-Atomic Resolution Neutron Crystallography on Perdeuterated Pyrococcus Furiosus Rubredoxin: Implication of Hydronium Ions and Protonation Equilibria and Hydronium Ions in Redox Changes
Angew.Chem.Int.Ed.Engl., 52, 2013
4AV5
DownloadVisualize
BU of 4av5 by Molmil
Structure of a triclinic crystal of the FimH lectin domain in complex with a propynyl biphenyl alpha-D-mannoside, at 1.4 A resolution
Descriptor: (2R,3S,4S,5S,6S)-2-(hydroxymethyl)-6-[3-(4-phenylphenyl)prop-2-ynoxy]oxane-3,4,5-triol, FIMH, SULFATE ION
Authors:Wellens, A, Lahmann, M, Touaibia, M, Vaucher, J, Oscarson, S, Roy, R, Remaut, H, Bouckaert, J.
Deposit date:2012-05-23
Release date:2012-06-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Tyrosine Gate as a Potential Entropic Lever in the Receptor-Binding Site of the Bacterial Adhesin Fimh.
Biochemistry, 51, 2012
4AVI
DownloadVisualize
BU of 4avi by Molmil
Structure of the FimH lectin domain in the trigonal space group, in complex with a methyl ester octyl alpha-D-mannoside at 2.4 A resolution
Descriptor: FIMH, METHYL ESTER OCTYL ALPHA-1O-D-MANNOPYRANNOSIDE, NICKEL (II) ION, ...
Authors:Wellens, A, Lahmann, M, Touaibia, M, Vaucher, J, Oscarson, S, Roy, R, Remaut, H, Bouckaert, J.
Deposit date:2012-05-26
Release date:2012-06-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Tyrosine Gate as a Potential Entropic Lever in the Receptor-Binding Site of the Bacterial Adhesin Fimh.
Biochemistry, 51, 2012

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon