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PDB: 220 results

1YKS
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Crystal structure of yellow fever virus NS3 helicase
Descriptor: Genome polyprotein [contains: Flavivirin protease NS3 catalytic subunit]
Authors:Wu, J, Bera, A.K, Kuhn, R.J, Smith, J.L.
Deposit date:2005-01-18
Release date:2005-08-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the flavivirus helicase: implications for catalytic activity, protein interactions, and proteolytic processing.
J.Virol., 79, 2005
7K93
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DENV2 NS1 in complex with neutralizing 2B7 single chain Fab variable region (scFv)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2B7 single chain fab variable region, Non-structural protein 1
Authors:Akey, D.L, Smith, J.L.
Deposit date:2020-09-28
Release date:2020-12-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structural basis for antibody inhibition of flavivirus NS1-triggered endothelial dysfunction.
Science, 371, 2021
1XZN
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PYRR, THE REGULATOR OF THE PYRIMIDINE BIOSYNTHETIC OPERON IN BACILLUS CALDOLYTICUS, sulfate-bound form
Descriptor: MAGNESIUM ION, PyrR bifunctional protein, SULFATE ION
Authors:Chander, P, Halbig, K.M, Miller, J.K, Fields, C.J, Bonner, H.K, Grabner, G.K, Switzer, R.L, Smith, J.L.
Deposit date:2004-11-12
Release date:2005-03-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Structure of the Nucleotide Complex of PyrR, the pyr Attenuation Protein from Bacillus caldolyticus, Suggests Dual Regulation by Pyrimidine and Purine Nucleotides.
J.Bacteriol., 187, 2005
1XZ8
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Pyrr, The Regulator Of The Pyrimidine Biosynthetic Operon In Bacillus caldolyticus, Nucleotide-bound form
Descriptor: GUANOSINE-3'-MONOPHOSPHATE, GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, ...
Authors:Chander, P, Halbig, K.M, Miller, J.K, Fields, C.J, Bonner, H.K, Grabner, G.K, Switzer, R.L, Smith, J.L.
Deposit date:2004-11-11
Release date:2005-03-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the Nucleotide Complex of PyrR, the pyr Attenuation Protein from Bacillus caldolyticus, Suggests Dual Regulation by Pyrimidine and Purine Nucleotides.
J.Bacteriol., 187, 2005
7LO1
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FAD-dependent monooxygenase AfoD from A. nidulans
Descriptor: FAD-dependent monooxygenase afoD, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION
Authors:Rodriguez Benitez, A, Smith, J.L, Narayan, A.R.H.
Deposit date:2021-02-08
Release date:2022-04-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Deciphering the evolution of flavin-dependent monooxygenase stereoselectivity using ancestral sequence reconstruction.
Proc.Natl.Acad.Sci.USA, 120, 2023
1ZNN
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Structure of the synthase subunit of PLP synthase
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, PLP SYNTHASE, SULFATE ION
Authors:Zhu, J, Burgner, J.W, Harms, E, Belitsky, B.R, Smith, J.L.
Deposit date:2005-05-11
Release date:2005-05-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A New Arrangement of (beta/alpha)8 Barrels in the Synthase Subunit of PLP Synthase.
J.Biol.Chem., 280, 2005
1ZLY
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The structure of human glycinamide ribonucleotide transformylase in complex with alpha,beta-N-(hydroxyacetyl)-D-ribofuranosylamine and 10-formyl-5,8,dideazafolate
Descriptor: 4-[(4-{[(2-AMINO-4-OXO-3,4-DIHYDROQUINAZOLIN-6-YL)METHYL]AMINO}BENZOYL)AMINO]BUTANOIC ACID, 5-O-phosphono-beta-D-ribofuranosylamine, Phosphoribosylglycinamide formyltransferase
Authors:Dahms, T.E.S, Sainz, G, Giroux, E.L, Caperelli, C.A, Smith, J.L.
Deposit date:2005-05-09
Release date:2005-08-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:The apo and ternary complex structures of a chemotherapeutic target: human glycinamide ribonucleotide transformylase.
Biochemistry, 44, 2005
1ZLX
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The apo structure of human glycinamide ribonucleotide transformylase
Descriptor: GLYCEROL, Phosphoribosylglycinamide formyltransferase
Authors:Dahms, T.E, Sainz, G, Giroux, E.L, Caperelli, C.A, Smith, J.L.
Deposit date:2005-05-09
Release date:2005-08-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The apo and ternary complex structures of a chemotherapeutic target: human glycinamide ribonucleotide transformylase.
Biochemistry, 44, 2005
1EWH
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STRUCTURE OF CYTOCHROME F FROM CHLAMYDOMONAS REINHARDTII
Descriptor: ACETATE ION, CYTOCHROME F, HEME C
Authors:Sainz, G, Carrell, C.J, Ponamarev, M.V, Soriano, G.M, Cramer, W.A, Smith, J.L.
Deposit date:2000-04-25
Release date:2000-08-09
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Interruption of the internal water chain of cytochrome f impairs photosynthetic function.
Biochemistry, 39, 2000
1E2Z
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Q158L mutant of cytochrome f from Chlamydomonas reinhardtii
Descriptor: CYTOCHROME F, HEME C
Authors:Sainz, G, Carrell, C.J, Ponamarev, M.V, Soriano, G.M, Cramer, W.A, Smith, J.L.
Deposit date:2000-05-30
Release date:2000-08-04
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Interruption of the Internal Water Chain of Cytochrome F Impairs Photosynthetic Function
Biochemistry, 39, 2000
1ECC
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ESCHERICHIA COLI GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE (PRPP) AMIDOTRANSFERASE COMPLEXED WITH MN-CPRPP AND 5-OXO-NORLEUCINE
Descriptor: 1-ALPHA-PYROPHOSPHORYL-2-ALPHA,3-ALPHA-DIHYDROXY-4-BETA-CYCLOPENTANE-METHANOL-5-PHOSPHATE, 5-OXO-L-NORLEUCINE, GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE AMIDOTRANSFERASE, ...
Authors:Krahn, J.M, Smith, J.L.
Deposit date:1997-07-09
Release date:1998-04-15
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Coupled formation of an amidotransferase interdomain ammonia channel and a phosphoribosyltransferase active site.
Biochemistry, 36, 1997
1ECB
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ESCHERICHIA COLI GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE (PRPP) AMIDOTRANSFERASE COMPLEXED WITH 2 GMP, 1 MG PER SUBUNIT
Descriptor: GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE AMIDOTRANSFERASE, GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION
Authors:Krahn, J.M, Smith, J.L.
Deposit date:1997-07-15
Release date:1998-04-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Coupled formation of an amidotransferase interdomain ammonia channel and a phosphoribosyltransferase active site.
Biochemistry, 36, 1997
1E2W
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N168F mutant of cytochrome f from Chlamydomonas reinhardtii
Descriptor: CYTOCHROME F, HEME C
Authors:Sainz, G, Carrell, C.J, Ponamarev, M.V, Soriano, G.M, Cramer, W.A, Smith, J.L.
Deposit date:2000-05-30
Release date:2000-08-04
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Interruption of the Internal Water Chain of Cytochrome F Impairs Photosynthetic Function
Biochemistry, 39, 2000
1E2V
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N153Q mutant of cytochrome f from Chlamydomonas reinhardtii
Descriptor: ACETATE ION, CYTOCHROME F, HEME C
Authors:Sainz, G, Carrell, C.J, Ponamarev, M.V, Soriano, G.M, Cramer, W.A, Smith, J.L.
Deposit date:2000-05-29
Release date:2000-08-04
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Interruption of the Internal Water Chain of Cytochrome F Impairs Photosynthetic Function
Biochemistry, 39, 2000
3H0M
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BU of 3h0m by Molmil
Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus
Descriptor: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, GLUTAMINE, Glutamyl-tRNA(Gln) amidotransferase subunit A, ...
Authors:Wu, J, Bu, W, Sheppard, K, Kitabatake, M, Soll, D, Smith, J.L.
Deposit date:2009-04-09
Release date:2009-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Insights into tRNA-Dependent Amidotransferase Evolution and Catalysis from the Structure of the Aquifex aeolicus Enzyme
J.Mol.Biol., 391, 2009
3QIT
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BU of 3qit by Molmil
Thioesterase Domain From Curacin Biosynthetic Pathway
Descriptor: Polyketide synthase
Authors:Gehret, J.J, Smith, J.L.
Deposit date:2011-01-27
Release date:2011-03-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Terminal Alkene Formation by the Thioesterase of Curacin A Biosynthesis: STRUCTURE OF A DECARBOXYLATING THIOESTERASE.
J.Biol.Chem., 286, 2011
3H0L
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BU of 3h0l by Molmil
Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ASPARAGINE, Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, ...
Authors:Wu, J, Bu, W, Sheppard, K, Kitabatake, M, Soll, D, Smith, J.L.
Deposit date:2009-04-09
Release date:2009-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Insights into tRNA-Dependent Amidotransferase Evolution and Catalysis from the Structure of the Aquifex aeolicus Enzyme
J.Mol.Biol., 391, 2009
3IV9
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Structure of the B12-dependent Methionine Synthase (MetH) C-teminal half in a "His-On" conformation
Descriptor: COBALAMIN, Methionine synthase
Authors:Pattridge, K.A, Koutmos, M, Smith, J.L.
Deposit date:2009-08-31
Release date:2009-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Insights into the reactivation of cobalamin-dependent methionine synthase.
Proc.Natl.Acad.Sci.USA, 106, 2009
3KG6
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Dehydratase domain from CurF module of Curacin polyketide synthase
Descriptor: CALCIUM ION, CurF
Authors:Akey, D.L, Smith, J.L.
Deposit date:2009-10-28
Release date:2010-01-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structures of Dehydratase Domains from the Curacin Polyketide Biosynthetic Pathway.
Structure, 18, 2010
3KG8
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Dehydratase domain from CurJ module of Curacin polyketide synthase
Descriptor: CurJ
Authors:Akey, D.L, Smith, J.L.
Deposit date:2009-10-28
Release date:2010-01-19
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal Structures of Dehydratase Domains from the Curacin Polyketide Biosynthetic Pathway.
Structure, 18, 2010
3IVA
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Structure of the B12-dependent Methionine Synthase (MetH) C-teminal half with AdoHcy bound
Descriptor: COBALAMIN, Methionine synthase, NITRATE ION, ...
Authors:Pattridge, K.A, Koutmos, M, Smith, J.L.
Deposit date:2009-08-31
Release date:2009-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Insights into the reactivation of cobalamin-dependent methionine synthase.
Proc.Natl.Acad.Sci.USA, 106, 2009
3KG9
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Dehydratase domain from CurK module of Curacin polyketide synthase
Descriptor: CurK
Authors:Akey, D.L, Smith, J.L.
Deposit date:2009-10-28
Release date:2010-01-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structures of Dehydratase Domains from the Curacin Polyketide Biosynthetic Pathway.
Structure, 18, 2010
3KG7
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Dehydratase domain from CurH module of Curacin polyketide synthase
Descriptor: CurH
Authors:Akey, D.L, Smith, J.L.
Deposit date:2009-10-28
Release date:2010-01-19
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Crystal Structures of Dehydratase Domains from the Curacin Polyketide Biosynthetic Pathway.
Structure, 18, 2010
3BOL
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BU of 3bol by Molmil
Cobalamin-dependent methionine synthase (1-566) from Thermotoga maritima complexed with Zn2+
Descriptor: 2-AMINO-4-MERCAPTO-BUTYRIC ACID, 5-methyltetrahydrofolate S-homocysteine methyltransferase, POTASSIUM ION, ...
Authors:Koutmos, M, Smith, J.L, Ludwig, M.L.
Deposit date:2007-12-17
Release date:2008-03-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Metal active site elasticity linked to activation of homocysteine in methionine synthases.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3BQ6
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Crystal Structure of T. maritima Cobalamin-Independent Methionine Synthase complexed with Zn2+ (Monoclinic)
Descriptor: 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase, ZINC ION
Authors:Pejchal, R, Smith, J.L, Ludwig, M.L.
Deposit date:2007-12-19
Release date:2008-03-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Metal active site elasticity linked to activation of homocysteine in methionine synthases.
Proc.Natl.Acad.Sci.Usa, 105, 2008

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