Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 177 results

6RYL
DownloadVisualize
BU of 6ryl by Molmil
WUS-HD bound to TAAT DNA
Descriptor: DNA (5'-D(P*CP*AP*CP*AP*AP*CP*CP*CP*AP*TP*TP*AP*AP*CP*AP*C)-3'), DNA (5'-D(P*GP*TP*GP*TP*TP*AP*AP*TP*GP*GP*GP*TP*TP*GP*TP*G)-3'), Protein WUSCHEL
Authors:Sloan, J.J, Wild, K, Sinning, I.
Deposit date:2019-06-10
Release date:2020-04-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Structural basis for the complex DNA binding behavior of the plant stem cell regulator WUSCHEL.
Nat Commun, 11, 2020
8ODU
DownloadVisualize
BU of 8odu by Molmil
Chaetomium thermophilum Get1/Get2 heterotetramer in complex with a Get3 dimer (amphipol)
Descriptor: ATPase GET3, Protein GET2,Protein GET1, ZINC ION
Authors:McDowell, M.A, Wild, K, Sinning, I.
Deposit date:2023-03-09
Release date:2023-11-29
Method:ELECTRON MICROSCOPY (5 Å)
Cite:The GET insertase exhibits conformational plasticity and induces membrane thinning.
Nat Commun, 14, 2023
8ODV
DownloadVisualize
BU of 8odv by Molmil
Chaetomium thermophilum Get1/Get2 heterotetramer in complex with a Get3 dimer (nanodisc)
Descriptor: ATPase GET3, Protein GET2,Protein GET1, ZINC ION
Authors:McDowell, M.A, Wild, K, Sinning, I.
Deposit date:2023-03-09
Release date:2023-11-29
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:The GET insertase exhibits conformational plasticity and induces membrane thinning.
Nat Commun, 14, 2023
4UE4
DownloadVisualize
BU of 4ue4 by Molmil
Structural basis for targeting and elongation arrest of Bacillus signal recognition particle
Descriptor: 6S RNA, FTSQ SIGNAL SEQUENCE, SIGNAL RECOGNITION PARTICLE PROTEIN
Authors:Beckert, B, Kedrov, A, Sohmen, D, Kempf, G, Wild, K, Sinning, I, Stahlberg, H, Wilson, D.N, Beckmann, R.
Deposit date:2014-12-15
Release date:2015-09-09
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Translational Arrest by a Prokaryotic Signal Recognition Particle is Mediated by RNA Interactions.
Nat.Struct.Mol.Biol., 22, 2015
1Y10
DownloadVisualize
BU of 1y10 by Molmil
Mycobacterial adenylyl cyclase Rv1264, holoenzyme, inhibited state
Descriptor: CALCIUM ION, Hypothetical protein Rv1264/MT1302, PENTAETHYLENE GLYCOL
Authors:Tews, I, Findeisen, F, Sinning, I, Schultz, A, Schultz, J.E, Linder, J.U.
Deposit date:2004-11-16
Release date:2005-05-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The structure of a pH-sensing mycobacterial adenylyl cyclase holoenzyme
Science, 308, 2005
1Y11
DownloadVisualize
BU of 1y11 by Molmil
Mycobacterial adenylyl cyclase Rv1264, holoenzyme, active state
Descriptor: GLYCEROL, Hypothetical protein Rv1264/MT1302, PENTAETHYLENE GLYCOL, ...
Authors:Tews, I, Findeisen, F, Sinning, I, Schultz, A, Schultz, J.E, Linder, J.U.
Deposit date:2004-11-16
Release date:2005-05-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:The structure of a pH-sensing mycobacterial adenylyl cyclase holoenzyme
Science, 308, 2005
2ABW
DownloadVisualize
BU of 2abw by Molmil
Glutaminase subunit of the plasmodial PLP synthase (Vitamin B6 biosynthesis)
Descriptor: Pdx2 protein, TETRAETHYLENE GLYCOL
Authors:Gengenbacher, M, Fitzpatrick, T.B, Raschle, T, Flicker, K, Sinning, I, Mueller, S, Macheroux, P, Tews, I, Kappes, B.
Deposit date:2005-07-17
Release date:2006-01-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Vitamin B6 Biosynthesis by the Malaria Parasite Plasmodium falciparum: Biochemical and structural insights
J.Biol.Chem., 281, 2006
5TKY
DownloadVisualize
BU of 5tky by Molmil
Crystal structure of the co-translational Hsp70 chaperone Ssb in the ATP-bound, open conformation
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Putative uncharacterized protein
Authors:Gumiero, A, Gese, G.V, Weyer, F.A, Lapouge, K, Sinning, I.
Deposit date:2016-10-10
Release date:2016-11-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Interaction of the cotranslational Hsp70 Ssb with ribosomal proteins and rRNA depends on its lid domain.
Nat Commun, 7, 2016
7Q72
DownloadVisualize
BU of 7q72 by Molmil
Structure of Pla1 in complex with Red1
Descriptor: NURS complex subunit red1, Poly(A) polymerase pla1
Authors:Soni, K, Wild, K, Sinning, I.
Deposit date:2021-11-09
Release date:2022-12-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Mechanistic insights into RNA surveillance by the canonical poly(A) polymerase Pla1 of the MTREC complex.
Nat Commun, 14, 2023
1SMB
DownloadVisualize
BU of 1smb by Molmil
Crystal Structure of Golgi-Associated PR-1 protein
Descriptor: 17kD fetal brain protein
Authors:Serrano, R.L, Kuhn, A, Hendricks, A, Helms, J.B, Sinning, I, Groves, M.R.
Deposit date:2004-03-08
Release date:2004-09-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural analysis of the human Golgi-associated plant pathogenesis related protein GAPR-1 implicates dimerization as a regulatory mechanism
J.Mol.Biol., 339, 2004
7OJU
DownloadVisualize
BU of 7oju by Molmil
Chaetomium thermophilum Naa50 GNAT-domain in complex with bisubstrate analogue CoA-Ac-MVNAL
Descriptor: CARBOXYMETHYL COENZYME *A, GLYCEROL, HEXAETHYLENE GLYCOL, ...
Authors:Weidenhausen, J, Kopp, J, Sinning, I.
Deposit date:2021-05-17
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Extended N-Terminal Acetyltransferase Naa50 in Filamentous Fungi Adds to Naa50 Diversity.
Int J Mol Sci, 23, 2022
3MIX
DownloadVisualize
BU of 3mix by Molmil
Crystal structure of the cytosolic domain of B. subtilis FlhA
Descriptor: Flagellar biosynthesis protein flhA
Authors:Bange, G, Kuemmerer, N, Bozkurt, G, Wild, K, Sinning, I.
Deposit date:2010-04-12
Release date:2010-06-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:FlhA provides the adaptor for coordinated delivery of late flagella building blocks to the type III secretion system.
Proc.Natl.Acad.Sci.USA, 107, 2010
8OO0
DownloadVisualize
BU of 8oo0 by Molmil
Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S0, ...
Authors:Klein, M.A, Wild, K, Kisonaite, M, Sinning, I.
Deposit date:2023-04-04
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
Nat Commun, 15, 2024
8ONX
DownloadVisualize
BU of 8onx by Molmil
High resolution structure of Chaetomium thermophilum MAP2
Descriptor: MANGANESE (II) ION, Methionine aminopeptidase 2
Authors:Klein, M.A, Wild, K, Kisonaite, M, Sinning, I.
Deposit date:2023-04-04
Release date:2024-02-14
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
Nat Commun, 15, 2024
8ONY
DownloadVisualize
BU of 8ony by Molmil
Human Methionine Aminopeptidase 2 at the 80S ribosome
Descriptor: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L19, ...
Authors:Klein, M.A, Wild, K, Kisonaite, M, Sinning, I.
Deposit date:2023-04-04
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
Nat Commun, 15, 2024
8ONZ
DownloadVisualize
BU of 8onz by Molmil
Chaetomium thermophilum Methionine Aminopeptidase 2 at the 80S ribosome
Descriptor: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L25-like protein, ...
Authors:Klein, M.A, Wild, K, Kisonaite, M, Sinning, I.
Deposit date:2023-04-04
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
Nat Commun, 15, 2024
4NWB
DownloadVisualize
BU of 4nwb by Molmil
Crystal structure of Mrt4
Descriptor: SULFATE ION, mRNA turnover protein 4
Authors:Holdermann, I, Sinning, I.
Deposit date:2013-12-06
Release date:2014-03-26
Last modified:2014-04-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:60S ribosome biogenesis requires rotation of the 5S ribonucleoprotein particle.
Nat Commun, 5, 2014
4IPA
DownloadVisualize
BU of 4ipa by Molmil
Structure of a thermophilic Arx1
Descriptor: Putative curved DNA-binding protein, SULFATE ION
Authors:Bange, G, Sinning, I.
Deposit date:2013-01-09
Release date:2013-01-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Consistent mutational paths predict eukaryotic thermostability.
BMC Evol Biol, 13, 2013
5NZT
DownloadVisualize
BU of 5nzt by Molmil
The structure of the COPI coat linkage I
Descriptor: ADP-ribosylation factor 1, Coatomer subunit alpha, Coatomer subunit beta, ...
Authors:Dodonova, S.O, Aderhold, P, Kopp, J, Ganeva, I, Roehling, S, Hagen, W.J.H, Sinning, I, Wieland, F, Briggs, J.A.G.
Deposit date:2017-05-15
Release date:2017-06-28
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (17 Å)
Cite:9 angstrom structure of the COPI coat reveals that the Arf1 GTPase occupies two contrasting molecular environments.
Elife, 6, 2017
5NZV
DownloadVisualize
BU of 5nzv by Molmil
The structure of the COPI coat linkage IV
Descriptor: ADP-ribosylation factor 1, Coatomer subunit alpha, Coatomer subunit beta, ...
Authors:Dodonova, S.O, Aderhold, P, Kopp, J, Ganeva, I, Roehling, S, Hagen, W.J.H, Sinning, I, Wieland, F, Briggs, J.A.G.
Deposit date:2017-05-15
Release date:2017-06-28
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (17.299999 Å)
Cite:9 angstrom structure of the COPI coat reveals that the Arf1 GTPase occupies two contrasting molecular environments.
Elife, 6, 2017
5EM2
DownloadVisualize
BU of 5em2 by Molmil
Crystal structure of the Erb1-Ytm1 complex
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Ribosome biogenesis protein ERB1, ...
Authors:Ahmed, Y.L, Sinning, I.
Deposit date:2015-11-05
Release date:2015-12-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Concerted removal of the Erb1-Ytm1 complex in ribosome biogenesis relies on an elaborate interface.
Nucleic Acids Res., 44, 2016
5NZU
DownloadVisualize
BU of 5nzu by Molmil
The structure of the COPI coat linkage II
Descriptor: ADP-ribosylation factor 1, Coatomer subunit alpha, Coatomer subunit beta, ...
Authors:Dodonova, S.O, Aderhold, P, Kopp, J, Ganeva, I, Roehling, S, Hagen, W.J.H, Sinning, I, Wieland, F, Briggs, J.A.G.
Deposit date:2017-05-15
Release date:2017-06-28
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (15 Å)
Cite:9 angstrom structure of the COPI coat reveals that the Arf1 GTPase occupies two contrasting molecular environments.
Elife, 6, 2017
5E4W
DownloadVisualize
BU of 5e4w by Molmil
Crystal structure of cpSRP43 chromodomains 2 and 3 in complex with the Alb3 tail
Descriptor: CALCIUM ION, GLYCEROL, Inner membrane protein ALBINO3, ...
Authors:Horn, A, Ahmed, Y.L, Wild, K, Sinning, I.
Deposit date:2015-10-07
Release date:2015-12-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for cpSRP43 chromodomain selectivity and dynamics in Alb3 insertase interaction.
Nat Commun, 6, 2015
4GNI
DownloadVisualize
BU of 4gni by Molmil
Structure of the Ssz1 ATPase bound to ATP and Magnesium
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Putative heat shock protein
Authors:Bange, G, Sinning, I.
Deposit date:2012-08-17
Release date:2012-12-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.796 Å)
Cite:Structural characterization of a eukaryotic chaperone-the ribosome-associated complex.
Nat.Struct.Mol.Biol., 20, 2013
1J8Y
DownloadVisualize
BU of 1j8y by Molmil
Signal Recognition Particle conserved GTPase domain from A. ambivalens T112A mutant
Descriptor: SIGNAL RECOGNITION 54 KDA PROTEIN
Authors:Montoya, G, te Kaat, K, Moll, R, Schaerfer, G, Sinning, I.
Deposit date:2001-05-23
Release date:2001-06-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of the conserved GTPase of SRP54 from the archaeon Acidianus ambivalens and its comparison with related structures suggests a model for the SRP-SRP receptor complex.
Structure Fold.Des., 8, 2000

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon