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PDB: 91 results

8EZH
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BU of 8ezh by Molmil
A tethered niacin-derived pincer complex with a nickel-carbon bond in lactate racemase R98A/R100A variant modeled with sulfite-NPN adduct
Descriptor: (4S)-5-methanethioyl-1-(5-O-phosphono-beta-D-ribofuranosyl)-4-sulfo-1,4-dihydropyridine-3-carbothioic S-acid, 1,2-ETHANEDIOL, CALCIUM ION, ...
Authors:Gatreddi, S, Hausinger, R.P, Hu, J.
Deposit date:2022-10-31
Release date:2023-01-25
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Irreversible inactivation of lactate racemase by sodium borohydride reveals reactivity of the nickel-pincer nucleotide cofactor.
Acs Catalysis, 13, 2023
8STD
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BU of 8std by Molmil
S127A variant of LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with authentic substrate NaAD and soaked with CS2
Descriptor: MAGNESIUM ION, NICOTINIC ACID ADENINE DINUCLEOTIDE, Pyridinium-3,5-biscarboxylic acid mononucleotide synthase
Authors:Chatterjee, S, Rankin, J.A, Hu, J, Hausinger, R.P.
Deposit date:2023-05-10
Release date:2023-12-27
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure of the LarB-Substrate Complex and Identification of a Reaction Intermediate during Nickel-Pincer Nucleotide Cofactor Biosynthesis.
Biochemistry, 62, 2023
8SOQ
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BU of 8soq by Molmil
S127A variant of LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with authentic substrate NaAD
Descriptor: MAGNESIUM ION, NICOTINIC ACID ADENINE DINUCLEOTIDE, Pyridinium-3,5-biscarboxylic acid mononucleotide synthase
Authors:Chatterjee, S, Rankin, J.A, Hu, J, Hausinger, R.P.
Deposit date:2023-04-29
Release date:2023-12-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of the LarB-Substrate Complex and Identification of a Reaction Intermediate during Nickel-Pincer Nucleotide Cofactor Biosynthesis.
Biochemistry, 62, 2023
8STC
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BU of 8stc by Molmil
S127A variant of LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with Zinc and soaked with bicarbonate.
Descriptor: MAGNESIUM ION, Pyridinium-3,5-biscarboxylic acid mononucleotide synthase, ZINC ION
Authors:Chatterjee, S, Rankin, J.A, Hu, J, Hausinger, R.P.
Deposit date:2023-05-09
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:S127A variant of LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with Zinc and soaked with bicarbonate.
To be published
7S91
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BU of 7s91 by Molmil
Structure of the malate racemase mar2 apoprotein from Thermoanaerobacterium thermosaccharolyticum at 2.25 angstroms resolution
Descriptor: CHLORIDE ION, Malate racemase Mar2
Authors:Gatreddi, S, Hausinger, R.P, Hu, J.
Deposit date:2021-09-20
Release date:2021-10-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural and mutational characterization of a malate racemase from the LarA superfamily.
Biometals, 36, 2023
6B2O
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BU of 6b2o by Molmil
LarE, a sulfur transferase involved in synthesis of the cofactor for lactate racemase, C176A variant
Descriptor: ATP-utilizing enzyme of the PP-loopsuperfamily, PHOSPHATE ION, SULFATE ION
Authors:Fellner, M, Hausinger, R.P, Hu, J.
Deposit date:2017-09-20
Release date:2018-09-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Analysis of the Active Site Cysteine Residue of the Sacrificial Sulfur Insertase LarE from Lactobacillus plantarum.
Biochemistry, 57, 2018
6OC6
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BU of 6oc6 by Molmil
Lanthanide-dependent methanol dehydrogenase XoxF from Methylobacterium extorquens, in complex with Lanthanum and Pyrroloquinoline quinone
Descriptor: LANTHANUM (III) ION, Lanthanide-dependent methanol dehydrogenase XoxF, PYRROLOQUINOLINE QUINONE
Authors:Fellner, M, Good, N.M, Martinez-Gomez, N.C, Hausinger, R.P, Hu, J.
Deposit date:2019-03-21
Release date:2020-05-13
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Lanthanide-dependent alcohol dehydrogenases require an essential aspartate residue for metal coordination and enzymatic function.
J.Biol.Chem., 295, 2020
6OC5
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BU of 6oc5 by Molmil
Lanthanide-dependent methanol dehydrogenase XoxF from Methylobacterium extorquens, in complex with Lanthanum
Descriptor: LANTHANUM (III) ION, Lanthanide-dependent methanol dehydrogenase XoxF
Authors:Fellner, M, Good, N.M, Martinez-Gomez, N.C, Hausinger, R.P, Hu, J.
Deposit date:2019-03-21
Release date:2020-05-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Lanthanide-dependent alcohol dehydrogenases require an essential aspartate residue for metal coordination and enzymatic function.
J.Biol.Chem., 295, 2020
7MJ0
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BU of 7mj0 by Molmil
LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with adenosine monophosphate AMP
Descriptor: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, Pyridinium-3,5-biscarboxylic acid mononucleotide synthase
Authors:Chatterjee, S, Rankin, J.A, Lagishetty, S, Hu, J, Hausinger, R.P.
Deposit date:2021-04-19
Release date:2021-09-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:The LarB carboxylase/hydrolase forms a transient cysteinyl-pyridine intermediate during nickel-pincer nucleotide cofactor biosynthesis.
Proc.Natl.Acad.Sci.USA, 118, 2021
7MJ1
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BU of 7mj1 by Molmil
LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with NAD
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Chatterjee, S, Rankin, J.A, Lagishetty, S, Hu, J, Hausinger, R.P.
Deposit date:2021-04-19
Release date:2021-09-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.402 Å)
Cite:The LarB carboxylase/hydrolase forms a transient cysteinyl-pyridine intermediate during nickel-pincer nucleotide cofactor biosynthesis.
Proc.Natl.Acad.Sci.USA, 118, 2021
7MJ2
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BU of 7mj2 by Molmil
LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with Zn
Descriptor: MAGNESIUM ION, Pyridinium-3,5-biscarboxylic acid mononucleotide synthase, ZINC ION
Authors:Chatterjee, S, Rankin, J.A, Lagishetty, S, Hu, J, Hausinger, R.P.
Deposit date:2021-04-19
Release date:2021-09-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The LarB carboxylase/hydrolase forms a transient cysteinyl-pyridine intermediate during nickel-pincer nucleotide cofactor biosynthesis.
Proc.Natl.Acad.Sci.USA, 118, 2021
3N8F
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BU of 3n8f by Molmil
Crystal structure of the complex of goat lactoperoxidase with thiocyanate at 3.2 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Lactoperoxidase, ...
Authors:Vikram, G, Singh, A.K, Singh, R.P, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-05-28
Release date:2010-07-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Crystal structure of the complex of goat lactoperoxidase with thiocyanate at 3.2 A resolution
To be Published
3NIU
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BU of 3niu by Molmil
Crystal structure of the complex of dimeric goat lactoperoxidase with diethylene glycol at 2.9 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Vikram, G, Singh, R.P, Singh, A.K, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-06-16
Release date:2010-07-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Crystal structure of the complex of dimeric goat lactoperoxidase with diethylene glycol at 2.9 A resolution
To be Published
1GQW
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BU of 1gqw by Molmil
Taurine/alpha-ketoglutarate Dioxygenase from Escherichia coli
Descriptor: 2-AMINOETHANESULFONIC ACID, 2-OXOGLUTARIC ACID, ALPHA-KETOGLUTARATE-DEPENDENT TAURINE DIOXYGENASE, ...
Authors:Elkins, J.M, Ryle, M.J, Clifton, I.J, Dunning-Hotopp, J.C, Lloyd, J.S, Burzlaff, N.I, Baldwin, J.E, Hausinger, R.P, Roach, P.L.
Deposit date:2001-12-05
Release date:2002-04-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:X-Ray Crystal Structure of Escherichia Coli Taurine/Alpha-Ketoglutarate Dioxygenase Complexed to Ferrous Iron and Substrates
Biochemistry, 41, 2002
1GY9
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BU of 1gy9 by Molmil
Taurine/alpha-ketoglutarate Dioxygenase from Escherichia coli
Descriptor: 2-AMINOETHANESULFONIC ACID, 2-OXOGLUTARIC ACID, ALPHA-KETOGLUTARATE-DEPENDENT TAURINE DIOXYGENASE, ...
Authors:Elkins, J.M, Burzlaff, N.I, Ryle, M.J, Lloyd, J.S, Clifton, I.J, Baldwin, J.E, Hausinger, R.P, Roach, P.L.
Deposit date:2002-04-22
Release date:2002-04-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-Ray Crystal Structure of Escherichia Coli Taurine/Alpha-Ketoglutarate Dioxygenase Complexed to Ferrous Iron and Substrates.
Biochemistry, 41, 2002
5HUQ
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BU of 5huq by Molmil
A tethered niacin-derived pincer complex with a nickel-carbon bond in lactate racemase
Descriptor: 3-methanethioyl-1-(5-O-phosphono-beta-D-ribofuranosyl)-5-(sulfanylcarbonyl)pyridin-1-ium, Lactate racemization operon protein LarA, NICKEL (II) ION, ...
Authors:Desguin, B, Zhang, T, Soumillion, P, Hols, P, Hu, J, Hausinger, R.P.
Deposit date:2016-01-27
Release date:2016-02-10
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:METALLOPROTEINS. A tethered niacin-derived pincer complex with a nickel-carbon bond in lactate racemase.
Science, 349, 2015
3UBA
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BU of 3uba by Molmil
Crystal structure of the complex of bovine lactoperoxidase with p-hydroxycinnamic acid at 2.6 A resolution
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Pandey, N, Singh, A.K, Singh, R.P, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-10-24
Release date:2011-12-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of the complex of bovine lactoperoxidase with p-hydroxycinnamic acid at 2.6 A resolution
to be published
3SXV
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BU of 3sxv by Molmil
Crystal structure of the complex of goat lactoperoxidase with amitrole at 2.1 A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Pandey, N, Singh, R.P, Singh, A.K, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-07-15
Release date:2011-08-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the complex of goat lactoperoxidase with amitrole at 2.1 A resolution
TO BE PUBLISHED
4MSF
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BU of 4msf by Molmil
Crystal structure of the complex of goat lactoperoxidase with 3-hydroxymethyl phenol at 1.98 Angstrom resolution
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(hydroxymethyl)phenol, ...
Authors:Singh, A, Singh, R.P, Sinha, M, Singh, A.K, Bhushan, A, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2013-09-18
Release date:2013-10-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal structure of the complex of goat lactoperoxidase with 3-hydroxymethyl phenol at 1.98 Angstrom resolution
To be published
3TGY
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BU of 3tgy by Molmil
Crystal structure of the complex of Bovine Lactoperoxidase with Ascorbic acid at 2.35 A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yamini, S, Singh, R.P, Singh, A.K, Pandey, N, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-08-18
Release date:2011-09-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure of bovine lactoperoxidase with a partially linked heme moiety at 1.98 angstrom resolution.
Biochim.Biophys.Acta, 1865, 2017
6B2M
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BU of 6b2m by Molmil
LarE, a sulfur transferase involved in synthesis of the cofactor for lactate racemase in complex with coenzyme A
Descriptor: ATP-utilizing enzyme of the PP-loopsuperfamily, COENZYME A, PHOSPHATE ION
Authors:Fellner, M, Hausinger, R.P, Hu, J.
Deposit date:2017-09-20
Release date:2018-09-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.088 Å)
Cite:Analysis of the Active Site Cysteine Residue of the Sacrificial Sulfur Insertase LarE from Lactobacillus plantarum.
Biochemistry, 57, 2018
5UDV
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BU of 5udv by Molmil
LarE, a sulfur transferase involved in synthesis of the cofactor for lactate racemase, in complex with iron
Descriptor: FE (III) ION, Lactate racemization operon protein LarE, PHOSPHATE ION, ...
Authors:Fellner, M, Desguin, B, Hausinger, R.P, Hu, J.
Deposit date:2016-12-28
Release date:2017-08-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.621 Å)
Cite:Structural insights into the catalytic mechanism of a sacrificial sulfur insertase of the N-type ATP pyrophosphatase family, LarE.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5UDR
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BU of 5udr by Molmil
LarE, a sulfur transferase involved in synthesis of the cofactor for lactate racemase in complex with nicotinamide mononucleotid NMN
Descriptor: ATP-utilizing enzyme of the PP-loopsuperfamily, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, MANGANESE (II) ION
Authors:Fellner, M, Desguin, B, Hausinger, R.P, Hu, J.
Deposit date:2016-12-28
Release date:2017-08-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Structural insights into the catalytic mechanism of a sacrificial sulfur insertase of the N-type ATP pyrophosphatase family, LarE.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5UDU
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BU of 5udu by Molmil
LarE, a sulfur transferase involved in synthesis of the cofactor for lactate racemase, in complex with manganese
Descriptor: Lactate racemization operon protein LarE, MANGANESE (II) ION, PHOSPHATE ION, ...
Authors:Fellner, M, Desguin, B, Hausinger, R.P, Hu, J.
Deposit date:2016-12-28
Release date:2017-08-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.792 Å)
Cite:Structural insights into the catalytic mechanism of a sacrificial sulfur insertase of the N-type ATP pyrophosphatase family, LarE.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5UDS
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BU of 5uds by Molmil
LarE, a sulfur transferase involved in synthesis of the cofactor for lactate racemase, in complex with MgATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Lactate racemization operon protein LarE, MAGNESIUM ION, ...
Authors:Fellner, M, Desguin, B, Hausinger, R.P, Hu, J.
Deposit date:2016-12-28
Release date:2017-08-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Structural insights into the catalytic mechanism of a sacrificial sulfur insertase of the N-type ATP pyrophosphatase family, LarE.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017

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PDB entries from 2024-11-06

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