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PDB: 41 results

9CUW
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BU of 9cuw by Molmil
Crystal Structure of SETDB1 Tudor domain in complex with UNC100013
Descriptor: (2E)-4-(dimethylamino)-N-(4-{[6-(dimethylamino)hexyl]amino}-2-{[5-(dimethylamino)pentyl]amino}quinazolin-6-yl)but-2-enamide, 1,2-ETHANEDIOL, Histone-lysine N-methyltransferase SETDB1, ...
Authors:Silva, M, Dong, A, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
Deposit date:2024-07-26
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Crystal Structure of SETDB1 Tudor domain in complex with UNC100013
To be published
9CUX
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Crystal Structure of SETDB1 Tudor domain in complex with UNC100016
Descriptor: (2E)-N-(4-{[6-(dimethylamino)hexyl]amino}-2-{[5-(dimethylamino)pentyl]amino}quinazolin-6-yl)but-2-enamide, 1,2-ETHANEDIOL, Histone-lysine N-methyltransferase SETDB1, ...
Authors:Silva, M, Dong, A, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
Deposit date:2024-07-26
Release date:2024-10-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Crystal Structure of SETDB1 Tudor domain in complex with UNC100016
To be published
1CE5
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BOVINE PANCREAS BETA-TRYPSIN IN COMPLEX WITH BENZAMIDINE
Descriptor: BENZAMIDINE, CALCIUM ION, CHLORIDE ION, ...
Authors:Ota, N, Stroupe, C, Ferreira-Da-Silva, J.M.S, Shah, S.S, Mares-Guia, M, Brunger, A.T.
Deposit date:1999-03-16
Release date:1999-03-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Non-Boltzmann thermodynamic integration (NBTI) for macromolecular systems: relative free energy of binding of trypsin to benzamidine and benzylamine.
Proteins, 37, 1999
4UT3
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BU of 4ut3 by Molmil
X-ray structure of the human PP1 gamma catalytic subunit treated with hydrogen peroxide
Descriptor: MANGANESE (II) ION, PHOSPHATE ION, SERINE/THREONINE-PROTEIN PHOSPHATASE PP1-GAMMA CATALYTIC SUBUNIT
Authors:Zeh Silva, M, Kopec, J, Fotinou, D, Steiner, R.A.
Deposit date:2014-07-17
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Targeted Redox Inhibition of Protein Phosphatase 1 by Nox4 Regulates Eif2Alpha-Mediated Stress Signaling.
Embo J., 35, 2016
4UT2
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X-ray structure of the human PP1 gamma catalytic subunit treated with ascorbate
Descriptor: MANGANESE (II) ION, PHOSPHATE ION, SERINE/THREONINE-PROTEIN PHOSPHATASE PP1-GAMMA CATALYTIC SUBUNIT
Authors:Kopec, J, Zeh Silva, M, Fotinou, C, Steiner, R.A.
Deposit date:2014-07-17
Release date:2015-07-22
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Targeted Redox Inhibition of Protein Phosphatase 1 by Nox4 Regulates Eif2Alpha-Mediated Stress Signaling.
Embo J., 35, 2016
2BZA
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BU of 2bza by Molmil
BOVINE PANCREAS BETA-TRYPSIN IN COMPLEX WITH BENZYLAMINE
Descriptor: BENZYLAMINE, CALCIUM ION, CHLORIDE ION, ...
Authors:Ota, N, Stroupe, C, Ferreira-Da-Silva, J.M.S, Shah, S.S, Mares-Guia, M, Brunger, A.T.
Deposit date:1999-03-16
Release date:1999-03-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Non-Boltzmann thermodynamic integration (NBTI) for macromolecular systems: relative free energy of binding of trypsin to benzamidine and benzylamine.
Proteins, 37, 1999
6VB8
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Crystal structure of a lectin from Canavalia brasiliensis seed (ConBr) complexed with indole-3-acetic acid
Descriptor: 1H-INDOL-3-YLACETIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Bezerra, E.H.S, Queiroz, P.P, da Silva, F.M.S, Girao, M.S, Sales, M.V, Paiva, C.P.S, Freire, V.N, Rocha, B.A.M.
Deposit date:2019-12-18
Release date:2020-12-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into phytohormone interaction to plant lectin ConBr
To Be Published
7UMJ
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BU of 7umj by Molmil
Crystal structure of recombinant Solieria filiformis lectin (rSfL)
Descriptor: Lectin SfL-1, SULFATE ION
Authors:Chaves, R.P, Bezerra, E.H.S, da Silva, F.M.S, Carneiro, R.F, Sampaio, A.H, Rocha, B.A.M, Nagano, C.S.
Deposit date:2022-04-07
Release date:2023-10-11
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structural study and antimicrobial and wound healing effects of lectin from Solieria filiformis (Kutzing) P.W.Gabrielson.
Biochimie, 214, 2023
8VI4
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BU of 8vi4 by Molmil
TehA from Haemophilus influenzae purified in LMNG
Descriptor: Tellurite resistance protein TehA homolog
Authors:Catalano, C, Senko, S, Tran, N.L, Lucier, K.W, Farwell, A.C, Silva, M.S, Dip, P.V, Poweleit, N, Scapin, G.
Deposit date:2024-01-03
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:High-Resolution Cryo-Electron Microscopy Structure Determination of Haemophilus influenzae Tellurite-Resistance Protein A via 200 kV Transmission Electron Microscopy.
Int J Mol Sci, 25, 2024
8VI3
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TehA from Haemophilus influenzae purified in GDN
Descriptor: Tellurite resistance protein TehA homolog
Authors:Catalano, C, Senko, S, Tran, N.L, Lucier, K.W, Farwell, A.C, Silva, M.S, Dip, P.V, Poweleit, N, Scapin, G.
Deposit date:2024-01-03
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:High-Resolution Cryo-Electron Microscopy Structure Determination of Haemophilus influenzae Tellurite-Resistance Protein A via 200 kV Transmission Electron Microscopy.
Int J Mol Sci, 25, 2024
8VI5
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BU of 8vi5 by Molmil
TehA from Haemophilus influenzae purified in OG
Descriptor: Tellurite resistance protein TehA homolog
Authors:Catalano, C, Senko, S, Tran, N.L, Lucier, K.W, Farwell, A.C, Silva, M.S, Dip, P.V, Poweleit, N, Scapin, G.
Deposit date:2024-01-03
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:High-Resolution Cryo-Electron Microscopy Structure Determination of Haemophilus influenzae Tellurite-Resistance Protein A via 200 kV Transmission Electron Microscopy.
Int J Mol Sci, 25, 2024
8VI2
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BU of 8vi2 by Molmil
TehA from Haemophilus influenzae purified in DDM
Descriptor: Tellurite resistance protein TehA homolog
Authors:Catalano, C, Senko, S, Tran, N.L, Lucier, K.W, Farwell, A.C, Silva, M.S, Dip, P.V, Poweleit, N, Scapin, G.
Deposit date:2024-01-03
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:High-Resolution Cryo-Electron Microscopy Structure Determination of Haemophilus influenzae Tellurite-Resistance Protein A via 200 kV Transmission Electron Microscopy.
Int J Mol Sci, 25, 2024
7U4S
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BU of 7u4s by Molmil
Structure of Glyceraldehyde-3-Phosphate Dehydrogenase from Candida albicans
Descriptor: GLYCEROL, Glyceraldehyde-3-phosphate dehydrogenase
Authors:Miranda, R.R, Silva, M, Iulek, J.
Deposit date:2022-02-28
Release date:2022-04-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Expression, purification, crystallization and structure of Glyceraldehyde-3-Phosphate Dehydrogenase from Candida albicans, main causative agent of candidiasis
Chem. Data Coll., 39, 2022
7UOD
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BU of 7uod by Molmil
Crystal structure of a lectin from Canavalia maritima seed (ConM) complexed with 2,4-dichloro-phenoxyacetic acid
Descriptor: (2,4-DICHLOROPHENOXY)ACETIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Sousa, J.P, Bezerra, E.H.S, Sales, M.V, Queiroz, P.P, da Silva, F.M.S, Carvalho, C.P.S, Freire, V.N, Rocha, B.A.M.
Deposit date:2022-04-12
Release date:2023-04-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural analysis of Canavalia maritima lectin complexed with auxins
To Be Published
7UN2
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Crystal structure of a lectin from Canavalia maritima seed (ConM) complexed with Indole-3-butyric acid
Descriptor: 3-INDOLEBUTYRIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:de Sousa, J.P, Bezerra, E.H.S, Sales, M.V, Queiroz, P.P, da Silva, F.M.S, Carvalho, C.P.S, Freire, V.N, Rocha, B.A.M.
Deposit date:2022-04-08
Release date:2023-04-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural analysis of Canavalia maritima lectin complexed with auxins
To Be Published
1ZN7
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BU of 1zn7 by Molmil
Human Adenine Phosphoribosyltransferase Complexed with PRPP, ADE and R5P
Descriptor: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, 5-O-phosphono-alpha-D-ribofuranose, ADENINE, ...
Authors:Iulek, J, Silva, M, Tomich, C.H.T.P, Thiemann, O.H.
Deposit date:2005-05-11
Release date:2006-04-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural Complexes of Human Adenine Phosphoribosyltransferase Reveal Novel Features of the APRT Catalytic Mechanism
J.Biomol.Struct.Dyn., 25, 2008
1ZN8
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Human Adenine Phosphoribosyltransferase Complexed with AMP, in Space Group P1 at 1.76 A Resolution
Descriptor: ADENOSINE MONOPHOSPHATE, Adenine phosphoribosyltransferase, CHLORIDE ION
Authors:Iulek, J, Silva, M, Tomich, C.H.T.P, Thiemann, O.H.
Deposit date:2005-05-11
Release date:2006-04-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structural Complexes of Human Adenine Phosphoribosyltransferase Reveal Novel Features of the APRT Catalytic Mechanism
J.Biomol.Struct.Dyn., 25, 2008
1ZN9
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BU of 1zn9 by Molmil
Human Adenine Phosphoribosyltransferase in Apo and AMP Complexed Forms
Descriptor: ADENOSINE MONOPHOSPHATE, Adenine phosphoribosyltransferase
Authors:Iulek, J, Silva, M, Tomich, C.H.T.P, Thiemann, O.H.
Deposit date:2005-05-11
Release date:2006-04-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural Complexes of Human Adenine Phosphoribosyltransferase Reveal Novel Features of the APRT Catalytic Mechanism
J.Biomol.Struct.Dyn., 25, 2008
6VJ0
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BU of 6vj0 by Molmil
Crystal structure of a chitin-binding protein from Moringa oleifera seeds (Mo-CBP4)
Descriptor: ACETATE ION, CHLORIDE ION, Chitin-binding protein Mo-CBP4
Authors:Bezerra, E.H.S, Lopes, T.D.P, da Silva, F.M.S, Costa, H.P.S, Freire, V.N, Rocha, B.A.M, Sousa, D.O.B.
Deposit date:2020-01-14
Release date:2021-01-27
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural characterization of a lectin from Moringa oleifera seeds with imflammatory activities
To Be Published
7JH0
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Crystallographic structure of glyceraldehyde-3-phosphate dehydrogenase from Schistosoma mansoni
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Boreiko, S, Silva, M, Iulek, J.
Deposit date:2020-07-20
Release date:2021-02-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structure determination and analyses of the GAPDH from the parasite Schistosoma mansoni, the first one from a platyhelminth.
Biochimie, 184, 2021
5J4P
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BU of 5j4p by Molmil
DIY G-Quadruplexes: Solution structure of d(GGTTTGGTTTTGGTTTGG) in sodium
Descriptor: DNA (5'-D(*GP*GP*TP*TP*TP*GP*GP*TP*TP*TP*TP*GP*GP*TP*TP*TP*GP*G)-3')
Authors:Dvorkin, S.A, Webba da Silva, M.
Deposit date:2016-04-01
Release date:2017-06-14
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Encoding canonical DNA quadruplex structure.
Sci Adv, 4, 2018
5J4W
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DIY G-Quadruplexes: Solution structure of d(GGTTTGGTTTTGGTTGG) in sodium
Descriptor: DNA (5'-D(*GP*GP*TP*TP*TP*GP*GP*TP*TP*TP*TP*GP*GP*TP*TP*GP*G)-3')
Authors:Dvorkin, S.A, Webba da Silva, M.
Deposit date:2016-04-01
Release date:2017-04-12
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Encoding canonical DNA quadruplex structure.
Sci Adv, 4, 2018
5J6U
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DIY G-Quadruplexes: Solution Structure of d(GGGGTTTGGGGTTTTGGGGAAGGGG) in sodium
Descriptor: DNA (25-MER)
Authors:Dvorkin, S.A, Karsisiotis, A.I, Webba da Silva, M.
Deposit date:2016-04-05
Release date:2017-05-10
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Encoding canonical DNA quadruplex structure.
Sci Adv, 4, 2018
5J05
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BU of 5j05 by Molmil
DIY G-Quadruplexes: Solution structure of d(GGGTTTGGGTTTTGGGAGGG) in sodium
Descriptor: DNA (5'-D(*GP*GP*GP*TP*TP*TP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*AP*GP*GP*G)-3')
Authors:Dvorkin, S.A, Karsisiotis, A.I, Webba da Silva, M.
Deposit date:2016-03-27
Release date:2017-04-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Encoding canonical DNA quadruplex structure.
Sci Adv, 4, 2018
6ORM
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BU of 6orm by Molmil
Crystal Structure of Peruvianin-I (Cysteine peptidase from Thevetia peruviana latex)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Peruvianin-I, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Cruz, W.T, Bezerra, E.H.S, da Silva, F.M.S, Freire, V.N, Ramos, M.V, Rocha, B.A.M, Freitas, C.D.T.
Deposit date:2019-04-30
Release date:2020-05-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure and specific location of a germin-like protein with proteolytic activity from Thevetia peruviana.
Plant Sci., 298, 2020

 

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