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PDB: 21 results

4XD7
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BU of 4xd7 by Molmil
Structure of thermophilic F1-ATPase inhibited by epsilon subunit
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP synthase epsilon chain, ATP synthase gamma chain, ...
Authors:SHIRAKIHARA, Y, SHIRATORI, A, TANIKAWA, H, NAKASAKO, M, YOSHIDA, M, SUZUKI, T.
Deposit date:2014-12-19
Release date:2015-08-26
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Structure of a thermophilic F1 -ATPase inhibited by an epsilon-subunit: deeper insight into the epsilon-inhibition mechanism.
Febs J., 282, 2015
1SKY
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BU of 1sky by Molmil
CRYSTAL STRUCTURE OF THE NUCLEOTIDE FREE ALPHA3BETA3 SUB-COMPLEX OF F1-ATPASE FROM THE THERMOPHILIC BACILLUS PS3
Descriptor: F1-ATPASE, SULFATE ION
Authors:Shirakihara, Y, Leslie, A.G.W, Abrahams, J.P, Walker, J.E, Ueda, T, Sekimoto, Y, Kambara, M, Saika, K, Kagawa, Y, Yoshida, M.
Deposit date:1997-02-26
Release date:1998-03-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The crystal structure of the nucleotide-free alpha 3 beta 3 subcomplex of F1-ATPase from the thermophilic Bacillus PS3 is a symmetric trimer.
Structure, 5, 1997
1PFK
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BU of 1pfk by Molmil
CRYSTAL STRUCTURE OF THE COMPLEX OF PHOSPHOFRUCTOKINASE FROM ESCHERICHIA COLI WITH ITS REACTION PRODUCTS
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Shirakihara, Y, Evans, P.R.
Deposit date:1988-01-25
Release date:1989-01-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the complex of phosphofructokinase from Escherichia coli with its reaction products.
J.Mol.Biol., 204, 1988
1IYX
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BU of 1iyx by Molmil
Crystal structure of enolase from Enterococcus hirae
Descriptor: ENOLASE, GLYCEROL, MAGNESIUM ION, ...
Authors:Hosaka, T, Meguro, T, Yamato, I, Shirakihara, Y.
Deposit date:2002-09-12
Release date:2003-07-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of Enterococcus hirae Enolase at 2.8 A Resolution
J.BIOCHEM.(TOKYO), 133, 2003
3IF5
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BU of 3if5 by Molmil
Crystal Structure Analysis of Mglu
Descriptor: Salt-tolerant glutaminase
Authors:Yoshimune, K, Shirakihara, Y.
Deposit date:2009-07-24
Release date:2009-08-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Crystal structure of salt-tolerant glutaminase from Micrococcus luteus K-3 in the presence and absence of its product L-glutamate and its activator Tris.
Febs J., 277, 2010
3WI3
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BU of 3wi3 by Molmil
Crystal Structure of the Sld3/Treslin domain from yeast Sld3
Descriptor: 1,2-ETHANEDIOL, DNA replication regulator SLD3, SULFATE ION
Authors:Itou, H, Araki, H, Shirakihara, Y.
Deposit date:2013-09-05
Release date:2014-08-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the homology domain of the eukaryotic DNA replication proteins sld3/treslin.
Structure, 22, 2014
3X37
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Crystal structure of the N-terminal domain of Sld7 in complex with Sld3
Descriptor: GLYCEROL, Mitochondrial morphogenesis protein SLD7, ZYRO0C14696p
Authors:Itou, H, Araki, H, Shirakihara, Y.
Deposit date:2015-01-16
Release date:2015-08-19
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The quaternary structure of the eukaryotic DNA replication proteins Sld7 and Sld3.
Acta Crystallogr.,Sect.D, 71, 2015
3X38
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Crystal structure of the C-terminal domain of Sld7
Descriptor: GLYCEROL, Mitochondrial morphogenesis protein SLD7, SULFATE ION
Authors:Itou, H, Araki, H, Shirakihara, Y.
Deposit date:2015-01-16
Release date:2015-08-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:The quaternary structure of the eukaryotic DNA replication proteins Sld7 and Sld3.
Acta Crystallogr.,Sect.D, 71, 2015
3VW4
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BU of 3vw4 by Molmil
Crystal structure of the DNA-binding domain of ColE2-P9 Rep in complex with the replication origin
Descriptor: DNA (5'-D(P*AP*AP*TP*GP*AP*GP*AP*CP*CP*AP*GP*AP*TP*AP*AP*GP*CP*CP*TP*TP*AP*TP*C)-3'), DNA (5'-D(P*GP*AP*TP*AP*AP*GP*GP*CP*TP*TP*AP*TP*CP*TP*GP*GP*TP*CP*TP*CP*AP*TP*T)-3'), Rep, ...
Authors:Itou, H, Yagura, M, Itoh, T, Shirakihara, Y.
Deposit date:2012-07-31
Release date:2013-07-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Basis for Replication Origin Unwinding by An Initiator-Primase of Plasmid ColE2-P9: Duplex DNA Unwinding by A Single Protein
J.Biol.Chem., 290, 2015
3IHA
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BU of 3iha by Molmil
Crystal Structure Analysis of Mglu in its glutamate form
Descriptor: GLUTAMIC ACID, Salt-tolerant glutaminase
Authors:Yoshimune, K, Shirakihara, Y.
Deposit date:2009-07-29
Release date:2010-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of salt-tolerant glutaminase from Micrococcus luteus K-3 in the presence and absence of its product l-glutamate and its activator Tris
Febs J., 277, 2010
3IH8
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BU of 3ih8 by Molmil
Crystal Structure Analysis of Mglu in its native form
Descriptor: Salt-tolerant glutaminase
Authors:Yoshimune, K, Shirakihara, Y.
Deposit date:2009-07-29
Release date:2010-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of salt-tolerant glutaminase from Micrococcus luteus K-3 in the presence and absence of its product l-glutamate and its activator Tris
Febs J., 277, 2010
3IH9
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BU of 3ih9 by Molmil
Crystal Structure Analysis of Mglu in its tris form
Descriptor: Salt-tolerant glutaminase
Authors:Yoshimune, K, Shirakihara, Y.
Deposit date:2009-07-29
Release date:2010-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of salt-tolerant glutaminase from Micrococcus luteus K-3 in the presence and absence of its product l-glutamate and its activator Tris
Febs J., 277, 2010
3IHB
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BU of 3ihb by Molmil
Crystal Structure Analysis of Mglu in its tris and glutamate form
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLUTAMIC ACID, Salt-tolerant glutaminase
Authors:Yoshimune, K, Shirakihara, Y.
Deposit date:2009-07-29
Release date:2010-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of salt-tolerant glutaminase from Micrococcus luteus K-3 in the presence and absence of its product l-glutamate and its activator Tris
Febs J., 277, 2010
2YVE
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BU of 2yve by Molmil
Crystal structure of the methylene blue-bound form of the multi-drug binding transcriptional repressor CgmR
Descriptor: 3,7-BIS(DIMETHYLAMINO)PHENOTHIAZIN-5-IUM, CHLORIDE ION, GLYCEROL, ...
Authors:Itou, H, Shirakihara, Y, Tanaka, I.
Deposit date:2007-04-12
Release date:2008-04-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structures of the Multidrug Binding Repressor Corynebacteriumglutamicum CgmR in Complex with Inducers and with an Operator
J.Mol.Biol., 403, 2010
2YVH
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BU of 2yvh by Molmil
Crystal structure of the operator-binding form of the multi-drug binding transcriptional repressor CgmR
Descriptor: 5'-D(*DGP*DGP*DTP*DCP*DGP*DGP*DTP*DAP*DCP*DAP*DGP*DTP*DTP*DA)-3', 5'-D(*DTP*DAP*DAP*DCP*DTP*DGP*DTP*DAP*DCP*DCP*DGP*DAP*DCP*DC)-3', Transcriptional regulator
Authors:Itou, H, Shirakihara, Y, Tanaka, I.
Deposit date:2007-04-12
Release date:2008-04-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structures of the Multidrug Binding Repressor Corynebacteriumglutamicum CgmR in Complex with Inducers and with an Operator
J.Mol.Biol., 403, 2010
3AGD
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BU of 3agd by Molmil
Crystal structure of Mglu in its native form in the presence of 4.3M NaCl
Descriptor: Salt-tolerant glutaminase
Authors:Yoshimune, K, Shirakihara, Y, Yumoto, I.
Deposit date:2010-03-30
Release date:2011-04-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Salt-induced conformational change of salt-tolerant glutaminase from Micrococcus luteus K-3
To be Published
2ZOZ
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BU of 2zoz by Molmil
Crystal structure of the ethidium-bound form of the multi-drug binding transcriptional repressor CgmR
Descriptor: ETHIDIUM, GLYCEROL, SULFATE ION, ...
Authors:Itou, H, Shirakihara, Y, Tanaka, I.
Deposit date:2008-06-20
Release date:2008-07-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structures of the Multidrug Binding Repressor Corynebacteriumglutamicum CgmR in Complex with Inducers and with an Operator
J.Mol.Biol., 403, 2010
3AGF
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BU of 3agf by Molmil
Crystal structure of Bacillus glutaminase in the presence of 4.3M NaCl
Descriptor: Glutaminase 1
Authors:Yoshimune, K, Shirakihara, Y, Yumoto, I.
Deposit date:2010-03-30
Release date:2011-04-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Salt-induced conformational change of salt-tolerant glutaminase from Micrococcus luteus K-3
To be Published
3AGE
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BU of 3age by Molmil
Crystal structure of Mglu in its L-glutamate binding form in the presence of 4.3M NaCl
Descriptor: GLUTAMIC ACID, Salt-tolerant glutaminase
Authors:Yoshimune, K, Shirakihara, Y, Yumoto, I.
Deposit date:2010-03-30
Release date:2011-04-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Salt-induced conformational change of salt-tolerant glutaminase from Micrococcus luteus K-3
To be Published
2Z5H
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BU of 2z5h by Molmil
Crystal structure of the head-to-tail junction of tropomyosin complexed with a fragment of TnT
Descriptor: General control protein GCN4 and Tropomyosin alpha-1 chain, Tropomyosin alpha-1 chain and General control protein GCN4, Troponin T, ...
Authors:Murakami, K, Nozawa, K, Tomii, K, Kudou, N, Igarashi, N, Shirakihara, Y, Wakatsuki, S, Stewart, M, Yasunaga, T, Wakabayashi, T.
Deposit date:2007-07-12
Release date:2008-04-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structural basis for tropomyosin overlap in thin (actin) filaments and the generation of a molecular swivel by troponin-T
Proc.Natl.Acad.Sci.USA, 105, 2008
2Z5I
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BU of 2z5i by Molmil
Crystal structure of the head-to-tail junction of tropomyosin
Descriptor: General control protein GCN4 and Tropomyosin alpha-1 chain, MAGNESIUM ION, Tropomyosin alpha-1 chain and General control protein GCN4
Authors:Murakami, K, Nozawa, K, Tomii, K, Kudou, N, Igarashi, N, Shirakihara, Y, Wakatsuki, S, Stewart, M, Yasunaga, T, Wakabayashi, T.
Deposit date:2007-07-12
Release date:2008-04-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for tropomyosin overlap in thin (actin) filaments and the generation of a molecular swivel by troponin-T
Proc.Natl.Acad.Sci.USA, 105, 2008

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