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PDB: 200 results

6IRV
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BU of 6irv by Molmil
Crystal structure of the human cap-specific adenosine methyltransferase
Descriptor: Phosphorylated CTD-interacting factor 1
Authors:Hirano, S, Nishimasu, H, Ishitani, R, Nureki, O.
Deposit date:2018-11-14
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Cap-specific terminal N 6 -methylation of RNA by an RNA polymerase II-associated methyltransferase.
Science, 363, 2019
1IWI
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BU of 1iwi by Molmil
Putidaredoxin-Binding Stablilizes an Active Conformer of Cytochrome P450cam in its Reduced State; Crystal Structure of Cytochrome P450cam
Descriptor: CAMPHOR, CYTOCHROME P450-CAM, PROTOPORPHYRIN IX CONTAINING FE
Authors:Nagano, S, Shimada, H, Tarumi, A, Hishiki, T, Kimata-Ariga, Y, Egawa, T, Park, S.-Y, Adachi, S, Shiro, Y, Ishimura, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-05-15
Release date:2002-06-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Infrared spectroscopic and mutational studies on putidaredoxin-induced conformational changes in ferrous CO-P450cam
Biochemistry, 42, 2003
6IRX
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BU of 6irx by Molmil
Crystal structure of the zebrafish cap-specific adenosine methyltransferase
Descriptor: PDX1 C-terminal-inhibiting factor 1
Authors:Hirano, S, Nishimasu, H, Ishitani, R, Nureki, O.
Deposit date:2018-11-14
Release date:2018-12-05
Last modified:2020-10-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Cap-specific terminal N 6 -methylation of RNA by an RNA polymerase II-associated methyltransferase.
Science, 363, 2019
6IRY
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BU of 6iry by Molmil
Crystal structure of the zebrafish cap-specific adenosine methyltransferase bound to SAH
Descriptor: 1,2-ETHANEDIOL, PDX1 C-terminal-inhibiting factor 1, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Hirano, S, Nishimasu, H, Ishitani, R, Nureki, O.
Deposit date:2018-11-14
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Cap-specific terminal N 6 -methylation of RNA by an RNA polymerase II-associated methyltransferase.
Science, 363, 2019
1IWK
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BU of 1iwk by Molmil
Putidaredoxin-Binding Stablilizes an Active Conformer of Cytochrome P450cam in its Reduced State; Crystal Structure of Mutant(112K) Cytochrome P450cam
Descriptor: CYTOCHROME P450-CAM, PROTOPORPHYRIN IX CONTAINING FE
Authors:Nagano, S, Shimada, H, Tarumi, A, Hishiki, T, Kimata-Ariga, Y, Egawa, T, Park, S.-Y, Adachi, S, Shiro, Y, Ishimura, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-05-15
Release date:2002-06-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Infrared spectroscopic and mutational studies on putidaredoxin-induced conformational changes in ferrous CO-P450cam
Biochemistry, 42, 2003
1J3C
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BU of 1j3c by Molmil
Solution structure of the C-terminal domain of the HMGB2
Descriptor: High mobility group protein 2
Authors:Kurita, J, Shimahara, H, Yoshida, M, Tate, S.
Deposit date:2003-01-23
Release date:2004-05-25
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Strucutral comparison of two HMG-boxes in the non-histone protein HMG-2 with in the HMG-1
To be Published
1J3X
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BU of 1j3x by Molmil
Solution structure of the N-terminal domain of the HMGB2
Descriptor: High mobility group protein 2
Authors:Kurita, J, Shimahara, H, Yoshida, M, Tate, S.
Deposit date:2003-02-19
Release date:2004-06-29
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Strucutral comparison of two HMG-boxes in the non-histone protein HMG-2 with in the HMG-1
To be Published
3A26
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BU of 3a26 by Molmil
Crystal structure of P. horikoshii TYW2 in complex with MeSAdo
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, TETRAETHYLENE GLYCOL, Uncharacterized protein PH0793
Authors:Umitsu, M, Nishimasu, H, Ishitani, R, Nureki, O.
Deposit date:2009-04-28
Release date:2009-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of AdoMet-dependent aminocarboxypropyl transfer reaction catalyzed by tRNA-wybutosine synthesizing enzyme, TYW2
Proc.Natl.Acad.Sci.USA, 106, 2009
3A25
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BU of 3a25 by Molmil
Crystal structure of P. horikoshii TYW2 in complex with AdoMet
Descriptor: S-ADENOSYLMETHIONINE, Uncharacterized protein PH0793
Authors:Umitsu, M, Nishimasu, H, Ishitani, R, Nureki, O.
Deposit date:2009-04-28
Release date:2009-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of AdoMet-dependent aminocarboxypropyl transfer reaction catalyzed by tRNA-wybutosine synthesizing enzyme, TYW2
Proc.Natl.Acad.Sci.USA, 106, 2009
6IRW
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BU of 6irw by Molmil
Crystal structure of the human cap-specific adenosine methyltransferase bound to SAH
Descriptor: Phosphorylated CTD-interacting factor 1, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Hirano, S, Nishimasu, H, Ishitani, R, Nureki, O.
Deposit date:2018-11-14
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Cap-specific terminal N 6 -methylation of RNA by an RNA polymerase II-associated methyltransferase.
Science, 363, 2019
6IRZ
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BU of 6irz by Molmil
Crystal structure of the zebrafish cap-specific adenosine methyltransferase bound to SAH and m7G-capped RNA
Descriptor: 1,2-ETHANEDIOL, 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, PDX1 C-terminal-inhibiting factor 1, ...
Authors:Hirano, S, Nishimasu, H, Ishitani, R, Nureki, O.
Deposit date:2018-11-15
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Cap-specific terminal N 6 -methylation of RNA by an RNA polymerase II-associated methyltransferase.
Science, 363, 2019
1IWJ
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BU of 1iwj by Molmil
Putidaredoxin-Binding Stablilizes an Active Conformer of Cytochrome P450cam in its Reduced State; Crystal Structure of Mutant(109K) Cytochrome P450cam
Descriptor: CAMPHOR, CYTOCHROME P450-CAM, PROTOPORPHYRIN IX CONTAINING FE
Authors:Nagano, S, Shimada, H, Tarumi, A, Hishiki, T, Kimata-Ariga, Y, Egawa, T, Park, S.-Y, Adachi, S, Shiro, Y, Ishimura, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-05-15
Release date:2002-06-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Infrared spectroscopic and mutational studies on putidaredoxin-induced conformational changes in ferrous CO-P450cam
Biochemistry, 42, 2003
1J1M
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BU of 1j1m by Molmil
Ricin A-Chain (Recombinant) at 100K
Descriptor: Ricin, SULFATE ION, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
Authors:Watanabe, K, Motoshima, H.
Deposit date:2002-12-10
Release date:2004-02-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Ricin A-Chain (Recombinant) at 100K
To be published
1J3D
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BU of 1j3d by Molmil
Solution structure of the C-terminal domain of the HMGB2
Descriptor: High mobility group protein 2
Authors:Kurita, J, Shimahara, H, Yoshida, M, Tate, S.
Deposit date:2003-01-23
Release date:2004-05-25
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Strucutral comparison of two HMG-boxes in the non-histone protein HMG-2 with in the HMG-1
To be Published
2AI5
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BU of 2ai5 by Molmil
Solution Structure of Cytochrome C552, determined by Distributed Computing Implementation for NMR data
Descriptor: Cytochrome c-552, HEME C
Authors:Nakamura, S, Ichiki, S.I, Takashima, H, Uchiyama, S, Hasegawa, J, Kobayashi, Y, Sambongi, Y, Ohkubo, T.
Deposit date:2005-07-29
Release date:2006-05-23
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Structure of Cytochrome c552 from a Moderate Thermophilic Bacterium, Hydrogenophilus thermoluteolus: Comparative Study on the Thermostability of Cytochrome c
Biochemistry, 45, 2006
2ZAX
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BU of 2zax by Molmil
Crystal Structure of Ferric Cytochrome P450cam
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CAMPHOR, Cytochrome P450-cam, ...
Authors:Sakurai, K, Shimada, H, Harada, K, Hayashi, T, Tsukihara, T.
Deposit date:2007-10-11
Release date:2008-01-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Evaluation of the functional role of the heme-6-propionate side chain in cytochrome P450cam
J.Am.Chem.Soc., 130, 2008
2ZUJ
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BU of 2zuj by Molmil
Crystal Structure of Camphor-soaked Ferric Cytochrome P450cam Mutant(D297L)
Descriptor: CAMPHOR, Camphor 5-monooxygenase, POTASSIUM ION, ...
Authors:Sakurai, K, Harada, K, Shimada, H, Shimokata, K, Hayashi, T, Tsukihara, T.
Deposit date:2008-10-18
Release date:2009-10-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of Camphor-soaked Ferric Cytochrome P450cam Mutant
to be published
3A27
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BU of 3a27 by Molmil
Crystal structure of M. jannaschii TYW2 in complex with AdoMet
Descriptor: S-ADENOSYLMETHIONINE, Uncharacterized protein MJ1557
Authors:Umitsu, M, Nishimasu, H, Ishitani, R, Nureki, O.
Deposit date:2009-04-28
Release date:2009-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.005 Å)
Cite:Structural basis of AdoMet-dependent aminocarboxypropyl transfer reaction catalyzed by tRNA-wybutosine synthesizing enzyme, TYW2
Proc.Natl.Acad.Sci.USA, 106, 2009
2ZWU
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BU of 2zwu by Molmil
Crystal Structure of Camphor Soaked Ferric Cytochrome P450cam
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CAMPHOR, Camphor 5-monooxygenase, ...
Authors:Sakurai, K, Shimada, H, Hayashi, T, Tsukihara, T.
Deposit date:2008-12-18
Release date:2009-02-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Substrate binding induces structural changes in cytochrome P450cam
Acta Crystallogr.,Sect.F, 65, 2009
2ZWT
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BU of 2zwt by Molmil
Crystal Structure of Ferric Cytochrome P450cam
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CAMPHOR, Camphor 5-monooxygenase, ...
Authors:Sakurai, K, Shimada, H, Hayashi, T, Tsukihara, T.
Deposit date:2008-12-18
Release date:2009-02-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Substrate binding induces structural changes in cytochrome P450cam
Acta Crystallogr.,Sect.F, 65, 2009
2ZAW
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BU of 2zaw by Molmil
Crystal Structure of Ferric Cytochrome P450cam Reconstituted with 6-Methyl-6-depropionated Hemin
Descriptor: 6-METHY-6-DEPROPIONATEHEMIN, CAMPHOR, CHLORIDE ION, ...
Authors:Harada, K, Sakurai, K, Shimada, H, Tsukihara, T, Hayashi, T.
Deposit date:2007-10-11
Release date:2008-01-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Evaluation of the functional role of the heme-6-propionate side chain in cytochrome P450cam
J.Am.Chem.Soc., 130, 2008
2ZUH
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BU of 2zuh by Molmil
Crystal Structure of Camphor-soaked Ferric Cytochrome P450cam Mutant (D297A)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CAMPHOR, Camphor 5-monooxygenase, ...
Authors:Sakurai, K, Harada, K, Shimada, H, Shimokata, K, Hayashi, T, Tsukihara, T.
Deposit date:2008-10-18
Release date:2009-10-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal Structure of Camphor-soaked Ferric Cytochrome P450cam Mutant
to be published
2ZUI
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BU of 2zui by Molmil
Crystal Structure of Camphor-soaked Ferric Cytochrome P450cam Mutant (D297N)
Descriptor: CAMPHOR, Camphor 5-monooxygenase, POTASSIUM ION, ...
Authors:Sakurai, K, Harada, K, Shimada, H, Shimokata, K, Hayashi, T, Tsukihara, T.
Deposit date:2008-10-18
Release date:2009-10-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of Camphor-soaked Ferric Cytochrome P450cam Mutant
TO BE PUBLISHED
2Z97
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BU of 2z97 by Molmil
Crystal Structure of Ferric Cytochrome P450cam Reconstituted with 7-Methyl-7-depropionated Hemin
Descriptor: 7-METHYL-7-DEPROPIONATEHEMIN, CAMPHOR, Cytochrome P450-cam, ...
Authors:Hayashi, T, Harada, K, Sakurai, K, Hirota, S, Shimada, H.
Deposit date:2007-09-18
Release date:2008-09-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A role of the heme-7-propionate side chain in cytochrome P450cam as a gate for regulating the access of water molecules to the substrate-binding site
J.Am.Chem.Soc., 131, 2009
2D0S
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BU of 2d0s by Molmil
Crystal structure of the Cytochrome C552 from moderate thermophilic bacterium, hydrogenophilus thermoluteolus
Descriptor: HEME C, cytochrome c
Authors:Nakamura, S, Ichiki, S.I, Takashima, H, Uchiyama, S, Hasegawa, J, Kobayashi, Y, Sambongi, Y, Ohkubo, T.
Deposit date:2005-08-08
Release date:2006-05-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of Cytochrome c552 from a Moderate Thermophilic Bacterium, Hydrogenophilus thermoluteolus: Comparative Study on the Thermostability of Cytochrome c
Biochemistry, 45, 2006

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