Crystal structure of M. jannaschii TYW2 in complex with AdoMet

Summary for 3A27

Related3A25 3A26
DescriptorUncharacterized protein MJ1557, S-ADENOSYLMETHIONINE (3 entities in total)
Functional Keywordswybutosine modification, transferase
Biological sourceMethanocaldococcus jannaschii (Methanococcus jannaschii)
Cellular locationCytoplasm (Potential) Q58952
Total number of polymer chains1
Total molecular weight32310.68
Umitsu, M.,Nishimasu, H.,Ishitani, R.,Nureki, O. (deposition date: 2009-04-28, release date: 2009-09-15, Last modification date: 2011-07-13)
Primary citation
Umitsu, M.,Nishimasu, H.,Noma, A.,Suzuki, T.,Ishitani, R.,Nureki, O.
Structural basis of AdoMet-dependent aminocarboxypropyl transfer reaction catalyzed by tRNA-wybutosine synthesizing enzyme, TYW2
Proc.Natl.Acad.Sci.USA, 106:15616-15621, 2009
PubMed: 19717466 (PDB entries with the same primary citation)
DOI: 10.1073/pnas.0905270106
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.254170 8.7% 11.9%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation reportDownload
PDB entries from 2020-10-14