2E2P
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![BU of 2e2p by Molmil](/molmil-images/mine/2e2p) | Crystal structure of Sulfolobus tokodaii hexokinase in complex with ADP | 分子名称: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, HEXOKINASE, ... | 著者 | Nishimasu, H, Fushinobu, S, Shoun, H, Wakagi, T. | 登録日 | 2006-11-15 | 公開日 | 2007-01-16 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Crystal structures of an ATP-dependent hexokinase with broad substrate specificity from the hyperthermophilic archaeon Sulfolobus tokodaii. J.Biol.Chem., 282, 2007
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2E2Q
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![BU of 2e2q by Molmil](/molmil-images/mine/2e2q) | Crystal structure of Sulfolobus tokodaii hexokinase in complex with xylose, Mg2+, and ADP | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, HEXOKINASE, MAGNESIUM ION, ... | 著者 | Nishimasu, H, Fushinobu, S, Shoun, H, Wakagi, T. | 登録日 | 2006-11-15 | 公開日 | 2007-01-16 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Crystal structures of an ATP-dependent hexokinase with broad substrate specificity from the hyperthermophilic archaeon Sulfolobus tokodaii. J.Biol.Chem., 282, 2007
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2DDC
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![BU of 2ddc by Molmil](/molmil-images/mine/2ddc) | Unique behavior of a histidine responsible for an engineered green-to-red photoconversion process | 分子名称: | MAGNESIUM ION, SODIUM ION, photoconvertible fluorescent protein | 著者 | Shimizu, H, Tsutsui, H, Nukina, N, Miyawaki, A. | 登録日 | 2006-01-27 | 公開日 | 2006-03-07 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (1.55 Å) | 主引用文献 | The E1 mechanism in photo-induced beta-elimination reactions for green-to-red conversion of fluorescent proteins. Chem.Biol., 16, 2009
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2E2O
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![BU of 2e2o by Molmil](/molmil-images/mine/2e2o) | Crystal structure of Sulfolobus tokodaii hexokinase in complex with glucose | 分子名称: | HEXOKINASE, beta-D-glucopyranose | 著者 | Nishimasu, H, Fushinobu, S, Shoun, H, Wakagi, T. | 登録日 | 2006-11-15 | 公開日 | 2007-01-16 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (1.65 Å) | 主引用文献 | Crystal structures of an ATP-dependent hexokinase with broad substrate specificity from the hyperthermophilic archaeon Sulfolobus tokodaii. J.Biol.Chem., 282, 2007
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2E2N
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![BU of 2e2n by Molmil](/molmil-images/mine/2e2n) | Crystal structure of Sulfolobus tokodaii hexokinase in the apo form | 分子名称: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, HEXOKINASE, SULFATE ION | 著者 | Nishimasu, H, Fushinobu, S, Shoun, H, Wakagi, T. | 登録日 | 2006-11-15 | 公開日 | 2007-01-16 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Crystal structures of an ATP-dependent hexokinase with broad substrate specificity from the hyperthermophilic archaeon Sulfolobus tokodaii. J.Biol.Chem., 282, 2007
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1HZY
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![BU of 1hzy by Molmil](/molmil-images/mine/1hzy) | HIGH RESOLUTION STRUCTURE OF THE ZINC-CONTAINING PHOSPHOTRIESTERASE FROM PSEUDOMONAS DIMINUTA | 分子名称: | 1,2-ETHANEDIOL, 2-PHENYL-ETHANOL, FORMIC ACID, ... | 著者 | Holden, H.M, Benning, M.M, Raushel, F.M, Shim, H. | 登録日 | 2001-01-26 | 公開日 | 2001-04-04 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | 主引用文献 | High resolution X-ray structures of different metal-substituted forms of phosphotriesterase from Pseudomonas diminuta. Biochemistry, 40, 2001
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1I0B
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![BU of 1i0b by Molmil](/molmil-images/mine/1i0b) | HIGH RESOLUTION STRUCTURE OF THE MANGANESE-CONTAINING PHOSPHOTRIESTERASE FROM PSEUDOMONAS DIMINUTA | 分子名称: | 1,2-ETHANEDIOL, 2-PHENYL-ETHANOL, FORMIC ACID, ... | 著者 | Holden, H.M, Benning, M.M, Raushel, F.M, Shim, H. | 登録日 | 2001-01-29 | 公開日 | 2001-04-04 | 最終更新日 | 2019-11-20 | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | 主引用文献 | High resolution X-ray structures of different metal-substituted forms of phosphotriesterase from Pseudomonas diminuta. Biochemistry, 40, 2001
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1I0D
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![BU of 1i0d by Molmil](/molmil-images/mine/1i0d) | HIGH RESOLUTION STRUCTURE OF THE ZINC/CADMIUM-CONTAINING PHOSPHOTRIESTERASE FROM PSEUDOMONAS DIMINUTA | 分子名称: | 1,2-ETHANEDIOL, 2-PHENYL-ETHANOL, CADMIUM ION, ... | 著者 | Holden, H.M, Benning, M.M, Raushel, F.M, Shim, H. | 登録日 | 2001-01-29 | 公開日 | 2001-04-04 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | 主引用文献 | High resolution X-ray structures of different metal-substituted forms of phosphotriesterase from Pseudomonas diminuta. Biochemistry, 40, 2001
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1JGM
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![BU of 1jgm by Molmil](/molmil-images/mine/1jgm) | High Resolution Structure of the Cadmium-containing Phosphotriesterase from Pseudomonas diminuta | 分子名称: | 1,2-ETHANEDIOL, 2-PHENYL-ETHANOL, CADMIUM ION, ... | 著者 | Benning, M.M, Shim, H, Raushel, F.M, Holden, H.M. | 登録日 | 2001-06-26 | 公開日 | 2001-07-04 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | 主引用文献 | High resolution X-ray structures of different metal-substituted forms of phosphotriesterase from Pseudomonas diminuta. Biochemistry, 40, 2001
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2GKI
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![BU of 2gki by Molmil](/molmil-images/mine/2gki) | Heavy and light chain variable single domains of an anti-DNA binding antibody hydrolyze both double- and single-stranded DNAs without sequence specificity | 分子名称: | nuclease | 著者 | Kim, Y.R, Kim, J.S, Lee, S.H, Lee, W.R, Sohn, J.N, Chung, Y.C, Shim, H.K, Lee, S.C, Kwon, M.H, Kim, Y.S. | 登録日 | 2006-04-02 | 公開日 | 2006-04-18 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.88 Å) | 主引用文献 | Heavy and light chain variable single domains of an anti-DNA binding antibody hydrolyze both double- and single-stranded DNAs without sequence specificity. J.Biol.Chem., 281, 2006
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3WRH
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![BU of 3wrh by Molmil](/molmil-images/mine/3wrh) | Crystal structure of P450cam | 分子名称: | CAMPHOR, Camphor 5-monooxygenase, POTASSIUM ION, ... | 著者 | Kishimoto, A, Takagi, K, Amano, A, Sakurai, K, Mizushima, T, Shimada, H. | 登録日 | 2014-02-25 | 公開日 | 2015-03-18 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.62 Å) | 主引用文献 | Structure of P450cam intermedite To be Published
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6J8Y
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![BU of 6j8y by Molmil](/molmil-images/mine/6j8y) | Crystal structure of the human RAD9-HUS1-RAD1-RHINO complex | 分子名称: | Cell cycle checkpoint control protein RAD9A, Cell cycle checkpoint protein RAD1, Checkpoint protein HUS1, ... | 著者 | Hara, K, Iida, N, Sakurai, H, Hashimoto, H. | 登録日 | 2019-01-21 | 公開日 | 2019-12-04 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structure of the RAD9-RAD1-HUS1 checkpoint clamp bound to RHINO sheds light on the other side of the DNA clamp. J.Biol.Chem., 295, 2020
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7BR0
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![BU of 7br0 by Molmil](/molmil-images/mine/7br0) | Crystal structure of AclR, a thioredoxin oxidoreductase fold protein carrying the CXXH catalytic motif | 分子名称: | FLAVIN-ADENINE DINUCLEOTIDE, Pyr_redox_2 domain-containing protein | 著者 | Hara, K, Hashimoto, H, Maeda, N, Watanabe, K, Hertweck, C, Tsunematsu, Y. | 登録日 | 2020-03-26 | 公開日 | 2020-12-23 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.003 Å) | 主引用文献 | Specialized Flavoprotein Promotes Sulfur Migration and Spiroaminal Formation in Aspirochlorine Biosynthesis. J.Am.Chem.Soc., 143, 2021
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6UEP
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![BU of 6uep by Molmil](/molmil-images/mine/6uep) | |
6UER
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![BU of 6uer by Molmil](/molmil-images/mine/6uer) | |
6UEQ
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![BU of 6ueq by Molmil](/molmil-images/mine/6ueq) | |
6IS0
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![BU of 6is0 by Molmil](/molmil-images/mine/6is0) | Crystal structure of the zebrafish cap-specific adenosine methyltransferase bound to SAH and m7G-capped RNA | 分子名称: | 1,2-ETHANEDIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, ... | 著者 | Hirano, S, Nishimasu, H, Ishitani, R, Nureki, O. | 登録日 | 2018-11-15 | 公開日 | 2018-12-05 | 最終更新日 | 2024-03-06 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Cap-specific terminal N 6 -methylation of RNA by an RNA polymerase II-associated methyltransferase. Science, 363, 2019
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4QVZ
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![BU of 4qvz by Molmil](/molmil-images/mine/4qvz) | FMRP N-terminal domain | 分子名称: | 1,2-ETHANEDIOL, Fragile X mental retardation protein 1 | 著者 | Myrick, L.K, Hashimoto, H, Cheng, X, Warren, S.T. | 登録日 | 2014-07-16 | 公開日 | 2014-12-03 | 最終更新日 | 2023-09-20 | 実験手法 | X-RAY DIFFRACTION (3.195 Å) | 主引用文献 | Human FMRP contains an integral tandem Agenet (Tudor) and KH motif in the amino terminal domain. Hum.Mol.Genet., 24, 2015
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3VIQ
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![BU of 3viq by Molmil](/molmil-images/mine/3viq) | Crystal structure of Swi5-Sfr1 complex from fission yeast | 分子名称: | GLYCEROL, Mating-type switching protein swi5, NITRATE ION, ... | 著者 | Kuwabara, N, Murayama, Y, Hashimoto, H, Kokabu, Y, Ikeguchi, M, Sato, M, Mayanagi, K, Tsutsui, Y, Iwasaki, H, Shimizu, T. | 登録日 | 2011-10-06 | 公開日 | 2012-08-22 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Mechanistic insights into the activation of Rad51-mediated strand exchange from the structure of a recombination activator, the Swi5-Sfr1 complex Structure, 20, 2012
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3VLB
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![BU of 3vlb by Molmil](/molmil-images/mine/3vlb) | Crystal structure of xeg-edgp | 分子名称: | EDGP, Xyloglucan-specific endo-beta-1,4-glucanase A | 著者 | Yoshizawa, T, Shimizu, T, Hirano, H, Sato, M, Hashimoto, H. | 登録日 | 2011-11-30 | 公開日 | 2012-04-18 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Structural basis for inhibition of xyloglucan-specific endo-beta-1,4-glucanase (XEG) by XEG-protein inhibitor J.Biol.Chem., 287, 2012
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8THV
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![BU of 8thv by Molmil](/molmil-images/mine/8thv) | FARFAR-NMR ensemble of HIV-1 TAR with apical loop capturing ground and excited conformational states | 分子名称: | RNA (29-MER) | 著者 | Roy, R, Geng, A, Shi, H, Merriman, D.K, Dethoff, E.A, Salmon, L, Al-Hashimi, H.M. | 登録日 | 2023-07-18 | 公開日 | 2023-08-02 | 最終更新日 | 2024-05-15 | 実験手法 | SOLUTION NMR | 主引用文献 | Kinetic Resolution of the Atomic 3D Structures Formed by Ground and Excited Conformational States in an RNA Dynamic Ensemble. J.Am.Chem.Soc., 145, 2023
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8U3M
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![BU of 8u3m by Molmil](/molmil-images/mine/8u3m) | The FARFAR-MD-NMR ensemble of an HIV-1 TAR excited state | 分子名称: | The excited state of HIV-1 transactivation response element (31-MER) | 著者 | Geng, A, Ganser, L, Roy, R, Shi, H, Pratihar, S, Case, D.A, Al-Hashimi, H.M. | 登録日 | 2023-09-07 | 公開日 | 2023-10-04 | 最終更新日 | 2024-05-15 | 実験手法 | SOLUTION NMR | 主引用文献 | An RNA excited conformational state at atomic resolution. Nat Commun, 14, 2023
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3VL8
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![BU of 3vl8 by Molmil](/molmil-images/mine/3vl8) | Crystal structure of XEG | 分子名称: | SULFATE ION, Xyloglucan-specific endo-beta-1,4-glucanase A | 著者 | Yoshizawa, T, Shimizu, T, Hirano, H, Sato, M, Hashimoto, H. | 登録日 | 2011-11-30 | 公開日 | 2012-04-18 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Structural basis for inhibition of xyloglucan-specific endo-beta-1,4-glucanase (XEG) by XEG-protein inhibitor J.Biol.Chem., 287, 2012
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7JU1
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![BU of 7ju1 by Molmil](/molmil-images/mine/7ju1) | The FARFAR-NMR Ensemble of 29-mer HIV-1 Trans-activation Response Element RNA (N=20) | 分子名称: | RNA (29-MER) | 著者 | Shi, H, Rangadurai, A, Roy, R, Yesselman, J.D, Al-Hashimi, H.M. | 登録日 | 2020-08-18 | 公開日 | 2020-10-07 | 最終更新日 | 2024-05-15 | 実験手法 | SOLUTION NMR | 主引用文献 | Rapid and accurate determination of atomistic RNA dynamic ensemble models using NMR and structure prediction Nat Commun, 11, 2020
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3VL9
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![BU of 3vl9 by Molmil](/molmil-images/mine/3vl9) | Crystal structure of xeg-xyloglucan | 分子名称: | Xyloglucan-specific endo-beta-1,4-glucanase A, beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose | 著者 | Yoshizawa, T, Shimizu, T, Hirano, H, Sato, M, Hashimoto, H. | 登録日 | 2011-11-30 | 公開日 | 2012-04-18 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.2 Å) | 主引用文献 | Structural basis for inhibition of xyloglucan-specific endo-beta-1,4-glucanase (XEG) by XEG-protein inhibitor J.Biol.Chem., 287, 2012
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